prot_E-siliculosus-1a_F_contig1034.273.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1034.273.1
Unique Nameprot_E-siliculosus-1a_F_contig1034.273.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length507
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1034.273.1 vs. uniprot
Match: D7FS68_ECTSI (RNA-splicing ligase RtcB homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS68_ECTSI)

HSP 1 Score: 987 bits (2551), Expect = 0.000e+0
Identity = 499/506 (98.62%), Postives = 503/506 (99.41%), Query Frame = 0
Query:    1 MKRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANARLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPAGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTKGVVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKASRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 506
            MKRSYEEEKSFITRE+GQRFRIDPGFVPNMKVPGYFYAN RLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSP GGVGFDINCGVRLVRTNLTL+DVLPVKEELTQSLFDHIPVGVGTKG+VPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKA RRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKI+SQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG
Sbjct:    1 MKRSYEEEKSFITRENGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSP-GGVGFDINCGVRLVRTNLTLDDVLPVKEELTQSLFDHIPVGVGTKGMVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKA-RRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKINSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 504          
BLAST of mRNA_E-siliculosus-1a_F_contig1034.273.1 vs. uniprot
Match: A0A7S1GE03_9STRA (RNA-splicing ligase RtcB homolog n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GE03_9STRA)

HSP 1 Score: 792 bits (2045), Expect = 1.010e-285
Identity = 387/504 (76.79%), Postives = 442/504 (87.70%), Query Frame = 0
Query:    3 RSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANARLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPAGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTKGVVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKASRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 506
            R+YEEE +++ RE  +RF +D GFVPNM+VPG FY N RLE L F+EL+Q S   G GGFLPA+KQ+ANVAALPG+VK SI LPDVHSGYGFA+GNVAAFDM DP +VVSP GGVGFDINCGVRLVRTNLT  D+LPVKE+LTQSLFDHIPVGVG+KG++P TA DL   LEMG+DWS+REGYAW EDKEHCEEYGRML ADP+K S+RAK RGLPQLGTLGAGNHYAEIQ+V+E+YD  AA +MGI++V QVC+MIHSGSRGLGHQVATDAL  ME AM RD I++NDRQLACA+I+S EGQ+YL  MAAAANYAWVNR+ MTFLTR+AF+K F  T ++LDMHVVYDVSHNIAKVE+HIVDG L+ LLVHRKG+TRAFPPHHPLIPVDYQFTGQPV++GGTMGTCSYVLTGT+KGM ETFGSTCHGAGRA SR +SR+TLDY  VL  LE+KGISIRVASPKLVMEEAPESYKDVT VV+TCH AG+S + +KLRP+AV+KG
Sbjct:   10 RTYEEECAYVKRETTERFGVDIGFVPNMRVPGVFYVNDRLESLMFDELKQFSTASGVGGFLPAMKQLANVAALPGIVKRSIALPDVHSGYGFAIGNVAAFDMNDPTSVVSP-GGVGFDINCGVRLVRTNLTEADLLPVKEKLTQSLFDHIPVGVGSKGIIPTTAKDLEAGLEMGMDWSLREGYAWAEDKEHCEEYGRMLAADPSKVSKRAKKRGLPQLGTLGAGNHYAEIQIVDEIYDTHAAGRMGIEQVGQVCVMIHSGSRGLGHQVATDALNEMEKAMVRDRIEVNDRQLACARITSTEGQNYLKSMAAAANYAWVNRSSMTFLTRQAFAKMFNSTPDDLDMHVVYDVSHNIAKVEEHIVDGRLRKLLVHRKGSTRAFPPHHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTEKGMAETFGSTCHGAGRAHSRAKSRRTLDYHEVLRKLEEKGISIRVASPKLVMEEAPESYKDVTAVVDTCHAAGISKKVIKLRPVAVVKG 512          
BLAST of mRNA_E-siliculosus-1a_F_contig1034.273.1 vs. uniprot
Match: A0A2I4D653_9TELE (RNA-splicing ligase RtcB homolog n=28 Tax=Gnathostomata TaxID=7776 RepID=A0A2I4D653_9TELE)

HSP 1 Score: 783 bits (2023), Expect = 1.740e-282
Identity = 383/506 (75.69%), Postives = 435/506 (85.97%), Query Frame = 0
Query:    1 MKRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANARLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPAGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTKGVVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKASRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 506
            M RSY +E  F+ + +   +RI  GFVPNMKV G FY N  LEKL FEELR    G G GGFLPA+KQI NVAALPG+V  SIGLPDVHSGYGFA+GN+AAFDM DPDAVVSP GGVGFDINCGVRL+RTNL   DV PVKE+L QSLFDHIPVGVG+KGV+P+ A DL + LEMG+DWS+REGYAW EDKEHCEEYGRMLQADP K S +AK RGLPQLGTLGAGNHYAEIQVV+++YD+ AAKKMGID   QVC+MIHSGSRGLGHQVATDALV ME AM RD I +NDRQLACA+I+SQEGQDYL GMAAA NYAWVNR+ MTFLTR+AFSK FG T ++LDMH++YDVSHNIAKVE+H+VDG  +TLLVHRKG+TRAFPPHHPLIPVDYQ TGQPV++GGTMGTCSYVLTGT++GM ETFG+TCHGAGRA SR +SR+ LD++ VL  L   GI+IRVASPKLVMEEAPESYK+VT+VVNTCHDAG+S +A+KLRP+AVIKG
Sbjct:    1 MSRSYNDELQFLEKLNSNCWRIKNGFVPNMKVEGIFYVNDSLEKLMFEELRNACRGGGVGGFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPDAVVSP-GGVGFDINCGVRLLRTNLDERDVQPVKEQLAQSLFDHIPVGVGSKGVIPMGAKDLEEALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSSKAKKRGLPQLGTLGAGNHYAEIQVVDDIYDDYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKITVNDRQLACARITSQEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFSKVFGTTPDDLDMHIIYDVSHNIAKVEEHMVDGKQRTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPVAVIKG 505          
BLAST of mRNA_E-siliculosus-1a_F_contig1034.273.1 vs. uniprot
Match: A0A7S3M965_9STRA (RNA-splicing ligase RtcB homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M965_9STRA)

HSP 1 Score: 780 bits (2015), Expect = 5.800e-281
Identity = 381/504 (75.60%), Postives = 438/504 (86.90%), Query Frame = 0
Query:    3 RSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANARLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPAGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTKGVVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKASRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 506
            R++++EKS+I +    ++ I+ GFV  M   G FY N+ LE L F+ELR   G    GGFLPAVKQIANVAALPG+V  SIGLPD+HSGYGFA+GNVAAFDM +P++VVSP GGVGFDINCGVRL+RTNLT  DV PV+E+L QSLFDHIPVGVG+KGV+P T ADLN+ LEMG+DWS+REGYAW EDKEHCEEYGRMLQADPTK S RAK RGLPQLGTLGAGNHY EIQVV+E++D+QAA +MGIDK+ QVCIMIHSGSRGLGHQVATDAL  MEAAM RD +  NDRQLACA+I+S EGQDYLAGMAAAANYAWVNR+ MTFL R+AF+K+F +  ++LDMHVVYDVSHNIAKVEQH+VDG +KTLLVHRKG+TRAFPPHHPLIPVDYQF GQPV++GGTMGTCSYVLTGTQ GMDETFGSTCHGAGRA+SRN SR+TL+Y+ VL  L  +GI+IRVASPKLVMEEAPESYKDVT+VV+TCH AG+S + +KLRPIAVIKG
Sbjct:   22 RTFDQEKSYIKKISPWKYEINKGFVNGMNCKGTFYVNSALEGLVFDELRCSCGSGAFGGFLPAVKQIANVAALPGIVHKSIGLPDLHSGYGFAIGNVAAFDMDNPESVVSP-GGVGFDINCGVRLLRTNLTEADVGPVREQLAQSLFDHIPVGVGSKGVIPTTMADLNEALEMGMDWSVREGYAWAEDKEHCEEYGRMLQADPTKVSARAKKRGLPQLGTLGAGNHYCEIQVVDEIFDQQAAARMGIDKIGQVCIMIHSGSRGLGHQVATDALTAMEAAMTRDKLVTNDRQLACARINSPEGQDYLAGMAAAANYAWVNRSSMTFLVRQAFAKQFNREPDDLDMHVVYDVSHNIAKVEQHMVDGKMKTLLVHRKGSTRAFPPHHPLIPVDYQFIGQPVLIGGTMGTCSYVLTGTQTGMDETFGSTCHGAGRAQSRNASRRTLEYQEVLDKLASQGIAIRVASPKLVMEEAPESYKDVTQVVDTCHAAGISKKCIKLRPIAVIKG 524          
BLAST of mRNA_E-siliculosus-1a_F_contig1034.273.1 vs. uniprot
Match: A0A7S3BHP6_9VIRI (RNA-splicing ligase RtcB homolog n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7S3BHP6_9VIRI)

HSP 1 Score: 780 bits (2014), Expect = 8.860e-281
Identity = 381/508 (75.00%), Postives = 439/508 (86.42%), Query Frame = 0
Query:    3 RSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANARLEKLTFEELR----QQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPAGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTKGVVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKASRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 506
            RSY+EE +++ R D QR+RI  GFVPNM V G FY N +L+ L   EL     +  GG    GFLPAVKQIANVAALPGVV  S+GLPDVHSGYGFA+GNVAAFDM DP+A+VSP GGVGFDINCGVRL+RTNLT  DVLP+KEEL QSLFDHIPVGVG++G++P TA DLN+VLEMG+DWS+REG+AWVEDKEHCEEYGRML ADP K S RAK RGLPQ+GTLGAGNHYAE+QVV+E++DE+AA KMGI+ V QV +MIHSGSRGLGHQVATD+L  ME AMARD I++NDRQLACA+I S+EGQDYL  MAAAANYAWVNR+ MTFL R+AF+K F KT +ELDMHV+YDVSHNIAK+E+H+V+G+LK LLVHRKG+TRAFPPHHPLIPVDYQ TGQPV++GGTMGTCSYVLTGT++GM ETFGSTCHGAGRA+SRN+SR  LDY+ VL  L+ KGISIRVASPKLVMEEAPESYKDV +VV TCH AG+S +AVKLRPIAV+KG
Sbjct:   20 RSYDEEIAYLERVDDQRWRIKAGFVPNMNVDGMFYVNEKLQGLALGELEVACERAKGGXXXXGFLPAVKQIANVAALPGVVGHSVGLPDVHSGYGFAIGNVAAFDMDDPEAIVSP-GGVGFDINCGVRLIRTNLTEADVLPIKEELAQSLFDHIPVGVGSQGIIPTTAGDLNEVLEMGMDWSVREGFAWVEDKEHCEEYGRMLTADPNKVSTRAKKRGLPQMGTLGAGNHYAEVQVVDEIFDERAASKMGINSVGQVVVMIHSGSRGLGHQVATDSLTAMERAMARDGIEVNDRQLACARIGSKEGQDYLQAMAAAANYAWVNRSSMTFLVRQAFAKAFKKTPDELDMHVIYDVSHNIAKMEEHVVNGELKRLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMRETFGSTCHGAGRAQSRNKSRHNLDYQQVLDALKAKGISIRVASPKLVMEEAPESYKDVCQVVETCHMAGISKKAVKLRPIAVVKG 526          
BLAST of mRNA_E-siliculosus-1a_F_contig1034.273.1 vs. uniprot
Match: W7TEQ9_9STRA (RNA-splicing ligase RtcB homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEQ9_9STRA)

HSP 1 Score: 776 bits (2003), Expect = 2.310e-279
Identity = 383/504 (75.99%), Postives = 438/504 (86.90%), Query Frame = 0
Query:    3 RSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANARLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPAGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTKGVVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKASRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 506
            R++EEE  F+ RE   RFRID G VPNMKV G FY N +LE+L F EL+Q +   G GGFLPAVKQIANVAALPG+V  SIGLPDVHSGYGFA+GNVAAF +AD +A+VSP GGVGFDINCGVRL+RTNLT EDV   +E+LTQSLFDHIPVGVG+KGV+P +AADL   LEMG+DWS+REGYAW ED EHCEE GRM QADPTK   RAK RGLPQLGTLGAGNHYAEIQVVEE++D +AA +MGID++ QVC+MIHSGSRGLGHQVATDALV ME AMARD I  NDRQLACA+I S EGQ+YLA MAAAAN+AWVNR+ MTFLTR+AF+K F  T ++LDMHV+YDVSHNIAKVE+H+  G  KTLLVHRKG+TRAFPP+HPLIPVDYQFTGQPV++GGTMGTCSYVLTGT KG++ETFGSTCHGAGRA+SRN+SRKTL+Y  VL  LE+KGISIRVASPKLVMEEAPESYKDVT+VV+TCH+AG+S +A+KLRPIAV+KG
Sbjct:    8 RTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSP-GGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADLEAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510          
BLAST of mRNA_E-siliculosus-1a_F_contig1034.273.1 vs. uniprot
Match: A0A315VIM7_GAMAF (RNA-splicing ligase RtcB homolog n=3 Tax=Cyprinodontiformes TaxID=28738 RepID=A0A315VIM7_GAMAF)

HSP 1 Score: 781 bits (2018), Expect = 2.670e-279
Identity = 384/506 (75.89%), Postives = 434/506 (85.77%), Query Frame = 0
Query:    1 MKRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANARLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPAGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTKGVVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKASRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 506
            M RSY +E  F+ +     +RI  GFVPNM+V G FY N  LEKL FEELR    G G GGFLPA+KQI NVAALPG+V  SIGLPDVHSGYGFA+GN+AAFDM DP+AVVSP GGVGFDINCGVRL+RTNL   DV PVKE+L QSLFDHIPVGVG+KGV+P+ A DL + LEMG+DWS+REGYAW EDKEHCEEYGRMLQADP K S +AK RGLPQLGTLGAGNHYAEIQVV+E+Y+E AAKKMGID   QVC+MIHSGSRGLGHQVATDALV ME AM RD I +NDRQLACA+I+SQEGQDYL GMAAA NYAWVNR+ MTFLTR+AFSK FG T ++LDMHV+YDVSHNIAKVE+H+VDG  +TLLVHRKG+TRAFPPHHPLIPVDYQ TGQPV++GGTMGTCSYVLTGT++GM ETFG+TCHGAGRA SR +SR+ LD++ VL  L   GI+IRVASPKLVMEEAPESYK+VT+VVNTCHDAG+S +A+KLRPIAVIKG
Sbjct:  154 MSRSYNDELQFLEKTGSTSWRIKKGFVPNMQVEGVFYVNDSLEKLIFEELRNACRGGGVGGFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPNAVVSP-GGVGFDINCGVRLLRTNLDERDVQPVKEQLAQSLFDHIPVGVGSKGVIPMGAKDLEEALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSSKAKKRGLPQLGTLGAGNHYAEIQVVDEIYNEYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKITVNDRQLACARITSQEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFSKVFGTTPDDLDMHVIYDVSHNIAKVEEHMVDGKQRTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMAETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPIAVIKG 658          
BLAST of mRNA_E-siliculosus-1a_F_contig1034.273.1 vs. uniprot
Match: K8FAV9_9CHLO (RNA-splicing ligase RtcB homolog n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8FAV9_9CHLO)

HSP 1 Score: 776 bits (2003), Expect = 4.850e-279
Identity = 383/504 (75.99%), Postives = 436/504 (86.51%), Query Frame = 0
Query:    3 RSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANARLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPAGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTKGVVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKASRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 506
            R+YEEE S+I   D   + +  GFV NM+VPG FY N  L  LTFEEL+Q +     GGFLPAVKQIANVA+LPG+V  SI LPDVHSGYGFA+GNVAAFD+ DP AVVSP GGVGFDINCGVRLVRTNLT  +V P+KEE+ Q+LFDHIPVGVG KG++P+ A  L+  LEMGIDW +REGYAW+EDKE CEE GRML ADP+K S+RAK RGLPQ+GTLGAGNHYAEIQVV+E+YD+ AAKKMGIDK+ QV +MIHSGSRGLGHQVATDALV ME AMA+D +++NDRQLACA+I+SQEG+DYLA MA AANYAWVNR  MTFL R+AF+K F KTAE+LDMHVVYDVSHNIAK+E+HIVDG+LKTLLVHRKG+TRAFPPHHPLIPVDYQ+TGQPV+VGGTMGTCSYVLTGT+KGM ETFGSTCHGAGRA+SR+ SR+ L YE VL  L+ KGISIRVASPKLVMEEAPESYKDVTEVV+TCHDAG+S + VKLRPIAVIKG
Sbjct:   28 RTYEEECSYIENRDPTSYVVKIGFVANMRVPGIFYVNKFLAGLTFEELKQHAERGRAGGFLPAVKQIANVASLPGIVGRSIALPDVHSGYGFAIGNVAAFDVNDPKAVVSP-GGVGFDINCGVRLVRTNLTEAEVQPLKEEVAQALFDHIPVGVGGKGIIPVDAKTLDTALEMGIDWCVREGYAWIEDKERCEENGRMLNADPSKVSQRAKKRGLPQMGTLGAGNHYAEIQVVDEIYDQFAAKKMGIDKIGQVVVMIHSGSRGLGHQVATDALVEMEKAMAKDGLELNDRQLACARINSQEGKDYLAAMACAANYAWVNRQSMTFLCRQAFAKTFNKTAEQLDMHVVYDVSHNIAKIEEHIVDGELKTLLVHRKGSTRAFPPHHPLIPVDYQYTGQPVLVGGTMGTCSYVLTGTEKGMHETFGSTCHGAGRARSRHNSRQKLSYEQVLENLKTKGISIRVASPKLVMEEAPESYKDVTEVVDTCHDAGISKKCVKLRPIAVIKG 530          
BLAST of mRNA_E-siliculosus-1a_F_contig1034.273.1 vs. uniprot
Match: RTCB_DANRE (RNA-splicing ligase RtcB homolog n=385 Tax=Euteleostomi TaxID=117571 RepID=RTCB_DANRE)

HSP 1 Score: 773 bits (1996), Expect = 2.230e-278
Identity = 381/506 (75.30%), Postives = 432/506 (85.38%), Query Frame = 0
Query:    1 MKRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANARLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPAGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTKGVVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKASRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 506
            M RSY +E  ++ +     +RI  GFVPNM V G FY N  LEKL FEELR    G G GGFLPA+KQI NVAALPG+V  SIGLPDVHSGYGFA+GN+AAFDM +PDAVVSP GGVGFDINCGVRL+RTNL   DV PVKE+L QSLFDHIPVGVG+KGV+P+ A DL + LEMG+DWS+REGYAW EDKEHCEEYGRMLQADP K S +AK RGLPQLGTLGAGNHYAEIQVV+E+Y++ AAKKMGID   QVC+MIHSGSRGLGHQVATDALV ME AM RD I +NDRQLACA+I+S+EGQDYL GMAAA NYAWVNR+ MTFLTR+AFSK F  T ++LDMHV+YDVSHNIAKVE+H+VDG  KTLLVHRKG+TRAFPPHHPLIPVDYQ TGQPV++GGTMGTCSYVLTGT++GM ETFG+TCHGAGRA SR +SR+ LD++ VL  L   GI+IRVASPKLVMEEAPESYK+VT+VVNTCHDAG+S +A+KLRPIAVIKG
Sbjct:    1 MSRSYNDELQYLDKIHKNCWRIKKGFVPNMLVEGVFYVNDPLEKLMFEELRNACRGGGFGGFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMENPDAVVSP-GGVGFDINCGVRLLRTNLDEGDVQPVKEQLAQSLFDHIPVGVGSKGVIPMGAKDLEEALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSSKAKKRGLPQLGTLGAGNHYAEIQVVDEIYNDYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDRITVNDRQLACARITSEEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFSKVFSTTPDDLDMHVIYDVSHNIAKVEEHMVDGRQKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPIAVIKG 505          
BLAST of mRNA_E-siliculosus-1a_F_contig1034.273.1 vs. uniprot
Match: RTCB_NEMVE (RNA-splicing ligase RtcB homolog n=2 Tax=Eumetazoa TaxID=6072 RepID=RTCB_NEMVE)

HSP 1 Score: 773 bits (1996), Expect = 2.230e-278
Identity = 382/506 (75.49%), Postives = 431/506 (85.18%), Query Frame = 0
Query:    1 MKRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANARLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPAGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTKGVVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKASRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 506
            M RSY+EE SF+ R     F I  GFVPNMKV G FY N  LEKL F+ELR   G +G GGFLP VKQIANVAALPG+V  S+GLPDVHSGYGFA+GN+AAFDM+ P+AVVSP GGVGFDINCGVRL+RTNL  +DV PVKE L QSLFDHIPVGVG+KGV+P+ A DL D LEMG+DWS+REGYAW EDKEHCEEYGRMLQAD  K S +AK RGLPQLGTLGAGNHYAEIQVV+E+Y+E AAKKMGID   QVC+MIHSGSRGLGHQVATDALV ME AM RD I++NDRQLACA I S EGQDYL GMA AANYAWVNR+ MTFLTR+AF+K F  T ++LDMH++YDVSHNIAKVE+H +DG  + LLVHRKG+TRAFPPHHPLIPVDYQ TGQPV++GGTMGTCSYVLTGT+KGM ETFG+TCHGAGRA SR +SR+ LDY+ VL  L +KGISIRVASPKLVMEEAPESYK+VT+VV+TCH AG+S +A+KLRPIAVIKG
Sbjct:    1 MPRSYKEECSFLERLSDSAFLIKKGFVPNMKVEGKFYINEHLEKLMFDELRHWCGAQGIGGFLPGVKQIANVAALPGIVGYSVGLPDVHSGYGFAIGNMAAFDMSLPEAVVSP-GGVGFDINCGVRLLRTNLEEKDVQPVKERLAQSLFDHIPVGVGSKGVIPMGAKDLEDALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADSAKVSAKAKKRGLPQLGTLGAGNHYAEIQVVDEIYNEFAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIEVNDRQLACAHIKSPEGQDYLKGMAGAANYAWVNRSSMTFLTRQAFAKVFNSTPDDLDMHLIYDVSHNIAKVEEHFLDGRQRQLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEKGMTETFGTTCHGAGRALSRAKSRRNLDYQDVLENLAQKGISIRVASPKLVMEEAPESYKNVTDVVDTCHSAGISKKAIKLRPIAVIKG 505          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1034.273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS68_ECTSI0.000e+098.62RNA-splicing ligase RtcB homolog n=2 Tax=Ectocarpu... [more]
A0A7S1GE03_9STRA1.010e-28576.79RNA-splicing ligase RtcB homolog n=1 Tax=Bicosoeci... [more]
A0A2I4D653_9TELE1.740e-28275.69RNA-splicing ligase RtcB homolog n=28 Tax=Gnathost... [more]
A0A7S3M965_9STRA5.800e-28175.60RNA-splicing ligase RtcB homolog n=1 Tax=Spumella ... [more]
A0A7S3BHP6_9VIRI8.860e-28175.00RNA-splicing ligase RtcB homolog n=3 Tax=Eukaryota... [more]
W7TEQ9_9STRA2.310e-27975.99RNA-splicing ligase RtcB homolog n=2 Tax=Monodopsi... [more]
A0A315VIM7_GAMAF2.670e-27975.89RNA-splicing ligase RtcB homolog n=3 Tax=Cyprinodo... [more]
K8FAV9_9CHLO4.850e-27975.99RNA-splicing ligase RtcB homolog n=1 Tax=Bathycocc... [more]
RTCB_DANRE2.230e-27875.30RNA-splicing ligase RtcB homolog n=385 Tax=Euteleo... [more]
RTCB_NEMVE2.230e-27875.49RNA-splicing ligase RtcB homolog n=2 Tax=Eumetazoa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001233tRNA-splicing ligase, RtcBPFAMPF01139RtcBcoord: 68..506
e-value: 1.1E-145
score: 485.9
IPR001233tRNA-splicing ligase, RtcBPANTHERPTHR11118UNCHARACTERIZEDcoord: 11..506
IPR036025tRNA-splicing ligase RtcB-like superfamilyGENE3D3.90.1860.10coord: 10..506
e-value: 8.3E-188
score: 627.2
IPR036025tRNA-splicing ligase RtcB-like superfamilySUPERFAMILY103365Hypothetical protein PH1602coord: 19..506
IPR027513tRNA-splicing ligase RtcB homologue, eukaryoticHAMAPMF_03144RtcB_eukcoord: 1..506
score: 60.848

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1034contigE-siliculosus-1a_F_contig1034:3275..11725 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1034.273.1mRNA_E-siliculosus-1a_F_contig1034.273.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1034 3118..11753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1034.273.1 ID=prot_E-siliculosus-1a_F_contig1034.273.1|Name=mRNA_E-siliculosus-1a_F_contig1034.273.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=507bp
MKRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANARLEKLTFEEL
RQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVA
AFDMADPDAVVSPAGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFD
HIPVGVGTKGVVPITAADLNDVLEMGIDWSIREGYAWVEDKEHCEEYGRM
LQADPTKASRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGID
KVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKIS
SQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVY
DVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPV
IVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVL
GGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRP
IAVIKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027513RtcB_euk
IPR036025RtcB-like_sf
IPR001233RtcB