Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match:
D7FTK7_ECTSI (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK7_ECTSI)
HSP 1 Score: 192 bits (488), Expect = 1.130e-60
Identity = 98/136 (72.06%), Postives = 114/136 (83.82%), Query Frame = 1
Query: 1 YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVY------EILQEWPIVTQADVDDGMRNHFTPELFSRSDILKERRIIRELLQTYKDRYERDLRLREANDRRAGVLSDGCASSPSDVEVVEDSTTTTPG 390
YLQ+AWSS+DRGEAT+DKDLLPLVIT+SPQQ NG DCG+ +ILQEWPI TQA+VDDGM+ HFTPELFS SDI ERR++R+LLQTYKDRYER+LRLRE ++RRAGVLSD ASSPSDVEV +D T + G
Sbjct: 22 YLQEAWSSNDRGEATVDKDLLPLVITESPQQGNGCDCGILVLRNAKDILQEWPIATQAEVDDGMQKHFTPELFSPSDISNERRMLRQLLQTYKDRYERELRLREISERRAGVLSDDSASSPSDVEVEKDHRTMSSG 157
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match:
D8LDN6_ECTSI (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN6_ECTSI)
HSP 1 Score: 103 bits (258), Expect = 2.850e-23
Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 1 YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVY------EILQEWPIVTQADVDDGMRNHFTPELFSRSDILKERRIIRELLQTYKDRYERD 279
YLQ W + RGE D+D+ PLV + P Q NG DCGVY EI Q+WP+VT A+V + + HF PELFS SDI +ERR++RELL+ K RYER+
Sbjct: 502 YLQAKWKETGRGEMLFDQDVFPLVRPRVPTQINGCDCGVYVLRYAKEICQQWPVVTAAEVKNRLSAHFRPELFSPSDITEERRMLRELLENCKVRYERE 600
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match:
A0A6H5KTD8_9PHAE (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD8_9PHAE)
HSP 1 Score: 103 bits (256), Expect = 5.350e-23
Identity = 60/136 (44.12%), Postives = 81/136 (59.56%), Query Frame = 1
Query: 1 YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVY------EILQEWPIVTQADVDDGMRNHFTPELFSRSDILKERRIIRELLQTYKDRYERDLRLREANDRRAGV-----LSDGCASSPSDVEVVEDST 375
YLQ W + RGE D+ + PLV + P Q NG DCGVY EI Q+WP+VT A+V + + HF PELFS SDI +ERR++RELL+ K RYER+ L ++ + G S G ++S S EV + +T
Sbjct: 804 YLQAKWKETGRGEMLFDQHVFPLVRPRVPTQINGCDCGVYVLRYAKEICQQWPVVTVAEVKNRLSAHFRPELFSPSDITEERRMLRELLENCKVRYEREKDLHKSKKGKKGRGNKTHFSAGASTSSSTPEVKKSAT 939
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match:
A0A6H5JQ96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ96_9PHAE)
HSP 1 Score: 79.0 bits (193), Expect = 1.170e-16
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 1 YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVYEI-----------LQEWPIVTQADVDDGMRNHFTPELFSRSDILKERRIIRELL 249
YLQ W S RGE +LPLV ++P Q N +D GVY + +WP+VT ADV+DGM+ HF +LF+ SDI +ERR++ +L+
Sbjct: 4 YLQAKWKESWRGELVFSAVVLPLVCPQAPTQTNAYDGGVYVLRFAKARSRLCPCMKWPVVTAADVNDGMQAHFNLQLFNASDITEERRMLGKLV 97
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match:
D7FID8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID8_ECTSI)
HSP 1 Score: 65.5 bits (158), Expect = 2.390e-11
Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 142 IVTQADVDDGMRNHFTPELFSRSDILKERRIIRELLQTYKDRYERDLRLREANDRRAGVLSDGCASSPSDVEVVED 369
+VT A+VD+ M+ HF+P+LFS DI +RR++R+LL K RYER++ ++AN+ V S SS DVEVVED
Sbjct: 1 MVTTANVDNKMKEHFSPDLFSPLDITDDRRLLRKLLHDCKVRYEREVEQQQANNMDPTVESQDPTSSTPDVEVVED 76
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match:
UPI001CF49ACC (uncharacterized protein LOC122954217 isoform X1 n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF49ACC)
HSP 1 Score: 51.2 bits (121), Expect = 7.300e-5
Identity = 21/43 (48.84%), Postives = 28/43 (65.12%), Query Frame = 1
Query: 1 YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVYEIL 129
+L+ W + R +D+ LPLV K PQQDNG+DCGVY +L
Sbjct: 461 FLRCEWVAKKRSTLQVDEKSLPLVYPKVPQQDNGYDCGVYVLL 503
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 6
0 1 Expect = 1.13e-60 / Id = 72.06 Expect = 2.85e-23 / Id = 52.53 Expect = 5.35e-23 / Id = 44.12 Expect = 1.17e-16 / Id = 42.55 Expect = 2.39e-11 / Id = 48.68 Expect = 7.30e-5 / Id = 48.84 Sequence D7FTK7_ECTSI D8LDN6_ECTSI A0A6H5KTD8_9PHAE A0A6H5JQ96_9PHAE D7FID8_ECTSI UPI001CF49ACC back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 0 Stop 0 Cds size 390 Model size 390 Exons 3 Ec32 ortholog Ec-13_004750.1 Ec32 ortholog description Peptidase C48, SUMO/Sentrin/Ubl1 Hectar predicted targeting category other localisation BRITE ko00000,ko01000,ko01002,ko04121 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. O EC 3.4.22.68 EggNOG OGs COG5160@1,KOG0779@2759 EggNOG free text desc. protein modification by small protein removal GOs GO:0000075,GO:0000278,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006276,GO:0006323,GO:0006464,GO:0006508,GO:0006807,GO:0006996,GO:0007049,GO:0007088,GO:0007093,GO:0007094,GO:0007346,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009987,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0016043,GO:0016787,GO:0016926,GO:0016929,GO:0018193,GO:0018205,GO:0019538,GO:0019783,GO:0022402,GO:0030071,GO:0030261,GO:0031577,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045786,GO:0045839,GO:0045841,GO:0045930,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051276,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0065007,GO:0070011,GO:0070122,GO:0070138,GO:0070140,GO:0070646,GO:0070647,GO:0071103,GO:0071173,GO:0071174,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1903047,GO:1905818,GO:1905819,GO:2000816,GO:2001251 KEGG ko ko:K08596 Seed eggNOG ortholog 2880.D8LDN6 Seed ortholog evalue 5.4e-20 Seed ortholog score 104.0 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10329.268.1
>prot_E-siliculosus-1a_F_contig10329.268.1 ID=prot_E-siliculosus-1a_F_contig10329.268.1|Name=mRNA_E-siliculosus-1a_F_contig10329.268.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=130bp
YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVYEILQEWPIVT back to top mRNA from alignment at E-siliculosus-1a_F_contig10329:758..2554-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10329.268.1 ID=mRNA_E-siliculosus-1a_F_contig10329.268.1|Name=mRNA_E-siliculosus-1a_F_contig10329.268.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1797bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10329:758..2554- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)TACCTTCAGCAGGCGTGGAGCTCTAGCGACCGAGGCGAGGCTACTATCGA
CAAGGACTTACTTCCTCTCGTGATAACCAAGTCGCCTCAGCAGGACAATG
GCTTCGACTGTGGAGTGTAC GTCCTACGCAATGCAAAGGCGAGCCTCTAC
CACTACCTTCGTGCCGCTAATTGCCTTGGTTGGTGCACCTCATCGTGGTT
GGTTTGGCTAGGGGAGGGGGGACGCCTTGACGACTGGTTGGCCATAGTCA
TCGCTCACCAAGACCTGCTGACCAATGACCCGGGATCAGCAGCGTTAACC
ACAGTACCGTCTTCCACGGTGGAGGAAGTTGGCGTTCTAAGTCTCCTTTC
ACTGATTTGTATGGCCGCGATTTCGTTTTCGTTTACCTTCGTCTCGACCG
TAGCCGAAGCGTCAATAAGACCGTGTCTTCATCCCTTGTCCCGCTGTGTG
GAACCGCATGTTTCTCGCCAGGAAATACTGCAGGAGTGGCCGATCGTTAC
TCAAGCAGACGTCGACGATGGAATGCGGAACCACTTCACACCGGAACTCT
TCAGCCGATCTGACATCTTGAAAGAGCGCCGGATAATCCGGGAGCTGCTG
CAGACATACAA GTGAGCCACCCGATTGTGTTACCATTTTGTGTACGTTTG
TCGTTCTGGTGACGAAACCCAAAGTTTAATTCGCTATGCGTGTCATTTGT
TTTGTCATGCTCAGTGTGGTCCAAGGGTTATTATATTACCAGAGGATAGC
TTGTACGACTGTTGGAATAACCTAGGTTTGAGACTACAGCAGTACATCAC
TTCGTTATGAAGAGGGGTCAGCAGACCGCACGTGCGCAGCAGATAACCGG
TGTTGCATGTGTGCCAAAAAGTAGAACAACAGACACACATGCAGGTTTAG
ACAACGCACCCTCAGGGGACGTGGAGACACGCCCGCAGCGAGCAAACCTT
TGACGACAACATGCAGCGGCCACCAAAATAGAGGGTGAAGCTGCAGTGAG
CTGACGGCAATCATCTGAAATACAATCGACATCTACACTGCTGGTGCAAC
CAGCCGCCCTAGATGTAGTTTCTACCAGTAAAGCCATATCGTGTGGGTGT
CAGCAGAGGTGCAGAGCAAAGGAAGCAGAGGTGCAGAGCAAAGGAGAGAC
CGTGCAGACGGTGGAGGTCGATTGGGACATGTACACAGAGAGTAGTTTCG
GTGAGTTAACAGTCATCCGGCCCGCGGGTGTCCGCATCCTTCGGAAAATC
CATGAATTCATTGAAAACACCGACGGCCTGACGACACAGGCCTGCTTGTT
ACCACGGCCTAGGAAGTTGTCTGTGTAACCCCATTCTTTGATCGCGATTA
TGTTGATGTTGGTTCTGAAGATCGACCGACAACTCTTACGTCTTGAGTCG
TACCCGGGGCTCATATCTAAGCCCCAATACTGTAGTGCCGGGCCCCCGAT
ACTTTGTTGAGATGACGCTCTTTCAATATAGTTTACACATACGGTAACGA
CCCGTGAGGTTACGTCTCCTATAAGGGGTACAGCATATGTACCAGCGTGT
CATGTCAGCGGAGGTCATCGCAACAACGCTTACGCACTAACGACTATGTC
TACCCCCCCGCCCTCATTTACGTTTCGTTTGGAAAACGGCCTTCTTCGTC
AAACCGACATGATGCAGGGACCGCTACGAACGTGACCTGCGACTGCGGGA
AGCCAACGATAGGAGGGCAGGGGTGTTGTCCGACGGCTGCGCGAGCAGCC
CTTCAGACGTGGAGGTGGTCGAGGATTCGACAACGACTACGCCCGGT back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10329:758..2554-
>mRNA_E-siliculosus-1a_F_contig10329.268.1 ID=mRNA_E-siliculosus-1a_F_contig10329.268.1|Name=mRNA_E-siliculosus-1a_F_contig10329.268.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=780bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10329:758..2554- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top