prot_E-siliculosus-1a_F_contig1031.263.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1031.263.1
Unique Nameprot_E-siliculosus-1a_F_contig1031.263.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length895
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1031.263.1 vs. uniprot
Match: D7FK94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK94_ECTSI)

HSP 1 Score: 1179 bits (3051), Expect = 0.000e+0
Identity = 715/862 (82.95%), Postives = 745/862 (86.43%), Query Frame = 0
Query:    1 MNIGASGAFESGIHPPPSFWSTSAVNQAAPTTAAVADDFHAPFGGHRPQGHREYDSRFDGAATADTVCSMLRALETASDRCKKPPGVVAAGAGKGTGGGRVVGGRVRVSVKRLRPRRNLAGGSRRGRQARSXXXXXXXXXXXXXXXXXXDSPTARECWGDDEPVSLLHESPSRVESRSLSRASSVRGTSDRARSPSPASSPNRTLRWARCGSGTDDREGRDGVTHSPSRRGGGQLGERFLDNHSRPRSPGSPRRDPALDKEGKGRTTREGLAFLQIQRDLLKRLEDLFVAIADDRRHELVALKREEDSWKTAAMQRARRDLRTASTTCEDHPVFAAGRNPAASTTLFSGSTSLEERTRDRIAEEGPGEEAMRAVGLVRDDEDSRDEGESQSPGRAGERGRRGGGGGWRLPARVVKEMRREFDRKMDQETAEVLEQENKALLEARARLAEREGARTKRELQDLSERLTNDGRVALASLRRELEAEEEKRLAEERGNLKEALARSLQQER----------ERLVTER----KLKVFDARDASGRESSQVAANLWEQAERSTSARREEAVRLLDEAADRARVKLDELLAEQEEQGLRAIRDRSSAERKAALKRIREEGERRCLKELKALADGASQKNEAWLRMVFGGLGKQFERGDESTRAGATAAXXXXXXXXXXXXXXXXXXLDEDGGSVSPALRLRAVEASNDCERLGRRLVELVIKEASMRLRESDFDVIPREHKAQESGTTASATASIGNSNMSKSDVDKTANEPQDLAHRGRNQHRTGNSSSGDAPREKRCQGCERLAHANVELTRLLLQTSTMRAREEARCSDTPITANTPPSPPTTAADTQRQGAARTGRVAPTKNK 848
            M+ GA G FESGIHPPPSFWSTSA NQAAPTTAAVADDFH   GGHRPQGHREYDSRFDGAATADTVCSMLRALETASDR KKPPG+VAAGAG+GTGGGR VGG VR +VKRLRPRRNLAGGSRR      XXXXXXXXXXXXXXXXXXDSPT RECWGDDEPVSLLHESPSRV SRS SRAS+VRGTSDRARSPSPASSPNRTLRWA C       EGRD VTHSPSRRGGGQLGERFLD+ SRPRSPG+PRRDPALD+EGKG TTREG+AFLQIQ+DLLKRLEDLFVAIADDRRHELVALKREEDSWKT+AMQRARRDLRTAS+T E++PVFAAGRNPAASTTLFSGSTSLEERTRDRIAEEGPGEEAMRAVGLVRD EDS                     GGWRLP RVV+EMRREFDRKMDQE+AEVLEQENKALLEARARLAEREGARTKRELQDLSERLTNDGR ALASLRRELE EEEKRLAEERGNLKEALA  L              + L + R     ++ F     S RESS VAANLW+QAERSTSARREEA+RLL EAADRARVKLDELL EQEEQGLRAIRDRSSAERKAALKRIREEGERRCLKELKALADGASQKNEAWLRMV GGLGK+ +RG E+   G T  XXXXXXXXXXXXXXXXXX+DEDGGSVSPALRLRAVEASN+CERLGRRLVELVIKEASMRLRESDFDV PREHKA+ESGTTASATASIGN NM K DVDKT  EPQDLAHRGRNQHRTGNS SGDAP EKRCQGC+RLAHANVELTRLLLQTSTMRAREE RCSDTPITANTPPSPPT AA  QRQG ART R   T+NK
Sbjct:    1 MSFGAPGVFESGIHPPPSFWSTSAANQAAPTTAAVADDFHTHSGGHRPQGHREYDSRFDGAATADTVCSMLRALETASDRRKKPPGMVAAGAGQGTGGGRAVGGNVRGTVKRLRPRRNLAGGSRREXXXXXXXXXXXXXXXXXXXXXXXDSPTVRECWGDDEPVSLLHESPSRVGSRSSSRASTVRGTSDRARSPSPASSPNRTLRWAPCERXXXXXEGRDRVTHSPSRRGGGQLGERFLDDQSRPRSPGTPRRDPALDEEGKGGTTREGVAFLQIQKDLLKRLEDLFVAIADDRRHELVALKREEDSWKTSAMQRARRDLRTASSTYEEYPVFAAGRNPAASTTLFSGSTSLEERTRDRIAEEGPGEEAMRAVGLVRDGEDSXXXXXXXXXXXXXXXXXXXXXGGWRLPMRVVEEMRREFDRKMDQESAEVLEQENKALLEARARLAEREGARTKRELQDLSERLTNDGRDALASLRRELEVEEEKRLAEERGNLKEALAHDLPSSTPSEPPSNTLYKSLNSNRGERHNIRHFFCCCTSRRESSHVAANLWKQAERSTSARREEALRLLGEAADRARVKLDELLVEQEEQGLRAIRDRSSAERKAALKRIREEGERRCLKELKALADGASQKNEAWLRMVLGGLGKKKQRGGETIMEG-TXXXXXXXXXXXXXXXXXXXXIDEDGGSVSPALRLRAVEASNNCERLGRRLVELVIKEASMRLRESDFDVTPREHKARESGTTASATASIGNINMKKRDVDKTTTEPQDLAHRGRNQHRTGNSCSGDAPGEKRCQGCDRLAHANVELTRLLLQTSTMRAREEGRCSDTPITANTPPSPPTAAAHAQRQGTARTARAXATRNK 861          
BLAST of mRNA_E-siliculosus-1a_F_contig1031.263.1 vs. uniprot
Match: A0A6H5KCA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA0_9PHAE)

HSP 1 Score: 474 bits (1220), Expect = 3.370e-158
Identity = 285/311 (91.64%), Postives = 289/311 (92.93%), Query Frame = 0
Query:  371 MRAVGLVRDDEDSRDEGESQSPGRAGERGRRGGGGGWRLPARVVKEMRREFDRKMDQETAEVLEQENKALLEARARLAEREGARTKRELQDLSERLTNDGRVALASLRRELEAEEEKRLAEERGNLKEALARSLQQERERLVTERKLKVFDARDASGRESSQVAANLWEQAERSTSARREEAVRLLDEAADRARVKLDELLAEQEEQGLRAIRDRSSAERKAALKRIREEGERRCLKELKALADGASQKNEAWLRMVFGGLGKQFERGDESTRAGATAAXXXXXXXXXXXXXXXXXXLDEDGGSVSPALRL 681
            MRAVGLVRD EDS DEGESQSPGR GERGRRGGGGGWRLP RVV+EMRREFDRKMDQE+AE    ENKALLEARARLAEREGARTKRELQDLSERLTNDGR ALAS RR+LEAEEEKRLAEERGNLKEALAR+LQQERERLVTERKLKVFDARDASGRESSQVAANLWEQAERSTSARREE VRLLDEAADRARVKLDELLAEQEEQGLRAIRDRSSAERKAALKRIREEGERRCLKELKALAD ASQKNEAWLRMVFGGLGKQFERGDESTRAGATAA          XXXXXXXXLDEDGGSVSPALRL
Sbjct:    1 MRAVGLVRDGEDSTDEGESQSPGRVGERGRRGGGGGWRLPTRVVEEMRREFDRKMDQESAE----ENKALLEARARLAEREGARTKRELQDLSERLTNDGRDALASFRRDLEAEEEKRLAEERGNLKEALARALQQERERLVTERKLKVFDARDASGRESSQVAANLWEQAERSTSARREEVVRLLDEAADRARVKLDELLAEQEEQGLRAIRDRSSAERKAALKRIREEGERRCLKELKALADSASQKNEAWLRMVFGGLGKQFERGDESTRAGATAAAAENGMRGLGXXXXXXXXLDEDGGSVSPALRL 307          
BLAST of mRNA_E-siliculosus-1a_F_contig1031.263.1 vs. uniprot
Match: A0A6H5JV24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV24_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 4.170e-58
Identity = 108/122 (88.52%), Postives = 110/122 (90.16%), Query Frame = 0
Query:    1 MNIGASGAFESGIHPPPSFWSTSAVNQAAPTTAAVADDFHAPFGGHRPQGHREYDSRFDGAATADTVCSMLRALETASDRCKKPPGVVAAGAGKGTGGGRVVGGRVRVSVKRLRPRRNLAGG 122
            MN GASGAFESGIHPPPSFWSTSAVNQA P  AA ADDFHAPFGGHRPQGHREYDSR D AATADTVCSMLR LE ASDR KKPPGVV AGAGKG+GGGRVVGG+VR SVKRLRPRRNLAGG
Sbjct:    1 MNFGASGAFESGIHPPPSFWSTSAVNQAVP--AADADDFHAPFGGHRPQGHREYDSRCDVAATADTVCSMLRTLENASDRRKKPPGVVEAGAGKGSGGGRVVGGKVRGSVKRLRPRRNLAGG 120          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1031.263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FK94_ECTSI0.000e+082.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCA0_9PHAE3.370e-15891.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV24_9PHAE4.170e-5888.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 553..573
NoneNo IPR availableCOILSCoilCoilcoord: 418..465
NoneNo IPR availableCOILSCoilCoilcoord: 474..509

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1031contigE-siliculosus-1a_F_contig1031:25483..36927 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1031.263.1mRNA_E-siliculosus-1a_F_contig1031.263.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1031 25483..38039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1031.263.1 ID=prot_E-siliculosus-1a_F_contig1031.263.1|Name=mRNA_E-siliculosus-1a_F_contig1031.263.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=895bp
MNIGASGAFESGIHPPPSFWSTSAVNQAAPTTAAVADDFHAPFGGHRPQG
HREYDSRFDGAATADTVCSMLRALETASDRCKKPPGVVAAGAGKGTGGGR
VVGGRVRVSVKRLRPRRNLAGGSRRGRQARSSSSLAGSSDSAAGGGGGGD
SPTARECWGDDEPVSLLHESPSRVESRSLSRASSVRGTSDRARSPSPASS
PNRTLRWARCGSGTDDREGRDGVTHSPSRRGGGQLGERFLDNHSRPRSPG
SPRRDPALDKEGKGRTTREGLAFLQIQRDLLKRLEDLFVAIADDRRHELV
ALKREEDSWKTAAMQRARRDLRTASTTCEDHPVFAAGRNPAASTTLFSGS
TSLEERTRDRIAEEGPGEEAMRAVGLVRDDEDSRDEGESQSPGRAGERGR
RGGGGGWRLPARVVKEMRREFDRKMDQETAEVLEQENKALLEARARLAER
EGARTKRELQDLSERLTNDGRVALASLRRELEAEEEKRLAEERGNLKEAL
ARSLQQERERLVTERKLKVFDARDASGRESSQVAANLWEQAERSTSARRE
EAVRLLDEAADRARVKLDELLAEQEEQGLRAIRDRSSAERKAALKRIREE
GERRCLKELKALADGASQKNEAWLRMVFGGLGKQFERGDESTRAGATAAA
AENGMRGGGGGGGGAGGLDEDGGSVSPALRLRAVEASNDCERLGRRLVEL
VIKEASMRLRESDFDVIPREHKAQESGTTASATASIGNSNMSKSDVDKTA
NEPQDLAHRGRNQHRTGNSSSGDAPREKRCQGCERLAHANVELTRLLLQT
STMRAREEARCSDTPITANTPPSPPTTAADTQRQGAARTGRVAPTKNKHR
AATTAGGVVNRKKRAPSAARSTKVVVVVSPTHRPKSSGRRTNTT*
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