prot_E-siliculosus-1a_F_contig14492.2620.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14492.2620.1
Unique Nameprot_E-siliculosus-1a_F_contig14492.2620.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length272
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig14492.2620.1 vs. uniprot
Match: A0A6H5JC12_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC12_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 2.340e-117
Identity = 227/272 (83.46%), Postives = 235/272 (86.40%), Query Frame = 0 
Query:    1 GELIIRPSTPASEYGTYALVVAIRFLERSAFDTLVRLVDPRGGYVLLSTFIEEERETPRALGGXXXXXXXXXXXXXXERSPGLPSNRGERGGLAFSDRRDGRAGCAAXXXXXXXXXXXXXXXAVPTVSATPVLETVAVGGGEATTRDPAAEAEERLLKSALPSESRDAPAAGGGSPVQTGVEGAGKEERTPVGKARKKKNKPGXXXXXXXXXXXXATLARWPHSSPRDYKKILRRGELARYFGDRHGFEVLEDSVERLPDGRPVACFLARRV 272
            GELIIRPSTPASEYGTYALVVAIRFLERSAFDTLVRLVDPRGGYVLLSTFIEEERETPRALGG XXXXXXXXXXX  ERSP LPSNRG+R GLAF+DRRDG+AGCAAXXXXXXXXXX     AVPTVSATPV+ T A+GG  A   DP+AEAEERLLKS LP ES DAPAAGG  PV+ G EGAGKEERTPVGKARKK NKPG            ATLARWPHSSPRDYKKILRRGELARYFGDRHGFEVLEDSVERLPDGRPVACFLARR+
Sbjct:  320 GELIIRPSTPASEYGTYALVVAIRFLERSAFDTLVRLVDPRGGYVLLSTFIEEERETPRALGGAXXXXXXXXXXXG-ERSPSLPSNRGDREGLAFTDRRDGKAGCAAXXXXXXXXXXA----AVPTVSATPVVVTAAIGGRGARAGDPSAEAEERLLKSDLPLESCDAPAAGG-RPVRPGAEGAGKEERTPVGKARKK-NKPGSPAAALEAAAAAATLARWPHSSPRDYKKILRRGELARYFGDRHGFEVLEDSVERLPDGRPVACFLARRM 584
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig14492.2620.1 vs. uniprot
Match: D8LJ32_ECTSI (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ32_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 1.060e-110
Identity = 195/272 (71.69%), Postives = 198/272 (72.79%), Query Frame = 0 
Query:    1 GELIIRPSTPASEYGTYALVVAIRFLERSAFDTLVRLVDPRGGYVLLSTFIEEERETPRALGGXXXXXXXXXXXXXXERSPGLPSNRGERGGLAFSDRRDGRAGCAAXXXXXXXXXXXXXXXAVPTVSATPVLETVAVGGGEATTRDPAAEAEERLLKSALPSESRDAPAAGGGSPVQTGVEGAGKEERTPVGKARKKKNKPGXXXXXXXXXXXXATLARWPHSSPRDYKKILRRGELARYFGDRHGFEVLEDSVERLPDGRPVACFLARRV 272
            GE+IIRPSTPASEYGTYALVVAIRFLERSAFDTLVRLVDPRGGYVLLSTFIEEERETPR LGG              ERSP LPSNR  RGGLAFSDRRD                                      GGGEATT +PAAEAEERLLKSALPSESRDAPA GGGS VQ GVEG GKEERTPVGKARKK NKPG            ATLARWPHSSPRDYKKILRRGELARYFGDRHGFEVLEDSVERLPDGRPVACFLARR+
Sbjct:  238 GEMIIRPSTPASEYGTYALVVAIRFLERSAFDTLVRLVDPRGGYVLLSTFIEEERETPRVLGGAVGGGGPGGGLRNGERSPSLPSNREGRGGLAFSDRRD--------------------------------------GGGEATTGNPAAEAEERLLKSALPSESRDAPA-GGGSSVQPGVEGVGKEERTPVGKARKK-NKPGSAAAALEAAAAAATLARWPHSSPRDYKKILRRGELARYFGDRHGFEVLEDSVERLPDGRPVACFLARRM 469
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14492.2620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JC12_9PHAE2.340e-11783.46Rhodanese domain-containing protein n=1 Tax=Ectoca... [more]
D8LJ32_ECTSI1.060e-11071.69Methyltransf_25 domain-containing protein n=1 Tax=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14492contigE-siliculosus-1a_F_contig14492:119..934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14492.2620.1mRNA_E-siliculosus-1a_F_contig14492.2620.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14492 119..934 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14492.2620.1 ID=prot_E-siliculosus-1a_F_contig14492.2620.1|Name=mRNA_E-siliculosus-1a_F_contig14492.2620.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=272bp
GELIIRPSTPASEYGTYALVVAIRFLERSAFDTLVRLVDPRGGYVLLSTF
IEEERETPRALGGAVGGGGPGGGPRNGERSPGLPSNRGERGGLAFSDRRD
GRAGCAAAAAAAADDDDEGVAAAVPTVSATPVLETVAVGGGEATTRDPAA
EAEERLLKSALPSESRDAPAAGGGSPVQTGVEGAGKEERTPVGKARKKKN
KPGSAAAALEAAAAAATLARWPHSSPRDYKKILRRGELARYFGDRHGFEV
LEDSVERLPDGRPVACFLARRV
back to top