prot_E-siliculosus-1a_F_contig144.2571.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig144.2571.1
Unique Nameprot_E-siliculosus-1a_F_contig144.2571.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1208
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig144.2571.1 vs. uniprot
Match: A0A6H5L6Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z7_9PHAE)

HSP 1 Score: 1192 bits (3085), Expect = 0.000e+0
Identity = 1039/1207 (86.08%), Postives = 1054/1207 (87.32%), Query Frame = 0
Query:    1 MQHEADMMLSSSTNRWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPATAARPSATNAAWVVKPASYSLPXXXXXXXXXXXXXXXXXXXXSSTELHLAEGRQLSLAPGQQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGRGSASAGTIATLILASLLTYALYNASVEALAGQRTRLSVPRRHPSSASAGGGSLIGTSGRDVPAEIVTXXXXXXXXXXXXXXXXXXXDDHLSDGGIGFKVEYYERVPPAVSWGGGANGGEGDXXXXAVAGWGKGVSVVTVSAWQTLAALGVGFLMSRFWRRFRRPEVRALSDAERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAAFFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKMALDDYGLDEISALFSGAKMTAGLQCLILLVVEVPRAAGGLSPRLLPHLWGVGVMEIDHQQPGGAVVSGEGAGIGVGEAGDWGEGRERARLACLLLANGVFLYGHLLVLFALLSRLSATMFAISSGYARAALVFVLLLALRGSAAGPRIVGMSLATLAVSAHFYRAYVRGRATSSLLNSADNADGLPCDADDGGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPGLFVPLLGTKLGDRRRGLDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPPSGFAWRWMGLRPSETTATPPAVSAAGQLVDKQXXXXXXRLEDGVGGVGIEGNFGFPSRQPRHHGGSEVLSPPAAFGGFAAEADATASAASFATDCSRGQDGGGYAREDRRKARNPQTGNHDFPAETFVGVEGTVETAPRRFGAPSPGSQQPYPPVSASSNXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRWGEGPSEGVPPPAGRRGSGHGLGRPAAGVPRPFRRLGGDSVVGPREEEGGVAAGFRGATVGGGSRGLPTRDGGEGGAGGREVSGSTGATLSSPSTSSSSFSLNGFEVIDKEEDMWT 1207
            MQHEADMMLSSSTNRWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LPATA RP ATNAAWVVKPASYSLP        XXXXX       S TELH AE +QLSLAPGQQP                                       XXXXXXXXXXXXXXXXXXXX     A  GTIATLILASL+TYALYNASVEALAGQRTRLS+PRRHPSSASAGG SLIGTSGRDVPAEIVT  XXXXXXXXXXXXXX   DDHLSDGGIGFKVEYYERVP AVSWGGGANG    XXXXAVAGWGKGVSVVTVSAWQTLAALG GFLMSRFWRRFRRPEVRALSD ERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAA FCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAAN+LLAVRAIAAKMALDDYGLDEISALFSGA MTAGLQ LILLVVEVPRAA GLSPRLLPHLWGVGVMEID QQPGG V+SGEGAGIGVG+AGDWGEGRERARLACLLLANGVFLYGHLLVLFALLSRLSATMFAISSGY  AALVFVLLLALRGSAAGPR+VGMSLATLAVSAHFYRAYVRGRATSSLLNSADNADGLPCDADDGGEAG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXX  KPGLFVPLLGTKLGDRRRG+DGSGXXXXXXXXXXXXXXXXXXXXXXXXX   GAPPSGFAWRWMGLRPSE+  TPP VSAAGQL DK+      RLEDGVG VGI+GNFG PSRQ  HHGGSEVLSPPAAF        ATASA SFA D SRGQDGG YA E RRKAR+PQ+GNHDFP ETFVGVEGTVETAPRRFGAPSPGSQQPYPPVSA   XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RWGE PSEGV  PAGRRGSGHGLG  AAGVPRPFRRLGGD V GPREEEGG+AAGFRGATVGGGSRGL T DG EGGAGGR+VSG TGATLSSPSTSSSSFSLNGFEVIDKEEDMWT
Sbjct:    1 MQHEADMMLSSSTNRWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHLPATATRPFATNAAWVVKPASYSLPPSNTTAAAXXXXXPARAPPSSLTELHPAEDQQLSLAPGQQPPSQQPQAGGRRRQGRGGYRGSIPSPPPLATQQFETCRQQXXXXXXXXXXXXXXXXXXXXXXXXXA--GTIATLILASLITYALYNASVEALAGQRTRLSIPRRHPSSASAGGASLIGTSGRDVPAEIVTTGXXXXXXXXXXXXXXEDEDDHLSDGGIGFKVEYYERVPTAVSWGGGANGXXXXXXXXAVAGWGKGVSVVTVSAWQTLAALGFGFLMSRFWRRFRRPEVRALSDGERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAACFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANILLAVRAIAAKMALDDYGLDEISALFSGATMTAGLQSLILLVVEVPRAAAGLSPRLLPHLWGVGVMEIDRQQPGGPVLSGEGAGIGVGDAGDWGEGRERARLACLLLANGVFLYGHLLVLFALLSRLSATMFAISSGYVHAALVFVLLLALRGSAAGPRMVGMSLATLAVSAHFYRAYVRGRATSSLLNSADNADGLPCDADDGGEAGGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCRPAVGMTAXXXXXXX--KPGLFVPLLGTKLGDRRRGVDGSGXXXXXXXXXXXXXXXXXXXXXXXXXDGDGAPPSGFAWRWMGLRPSESAVTPPVVSAAGQLADKRQQQQ--RLEDGVGDVGIDGNFGLPSRQLDHHGGSEVLSPPAAF--------ATASADSFAADGSRGQDGGDYACEGRRKARSPQSGNHDFPTETFVGVEGTVETAPRRFGAPSPGSQQPYPPVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RWGEEPSEGVSLPAGRRGSGHGLGGTAAGVPRPFRRLGGDYVAGPREEEGGIAAGFRGATVGGGSRGLRTEDG-EGGAGGRQVSG-TGATLSSPSTSSSSFSLNGFEVIDKEEDMWT 1189          
BLAST of mRNA_E-siliculosus-1a_F_contig144.2571.1 vs. uniprot
Match: D7G6G9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G9_ECTSI)

HSP 1 Score: 827 bits (2137), Expect = 2.380e-282
Identity = 541/605 (89.42%), Postives = 542/605 (89.59%), Query Frame = 0
Query:   89 LPATAARPSATNAAWVVKPASYSLPXXXXXXXXXXXXXXXXXXXXSSTELHLAEGRQLSLAPGQQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGRGSASAGTIATLILASLLTYALYNASVEALAGQRTRLSVPRRHPSSASAGGGSLIGTSGRDVPAEIVTXXXXXXXXXXXXXXXXXXXDDHLSDGGIGFKVEYYERVPPAVSWGGGANGGEGDXXXXAVAGWGKGVSVVTVSAWQTLAALGVGFLMSRFWRRFRRPEVRALSDAERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAAFFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKMALDDYGLDEISALFSGAKMTAGLQCLILLVVEVPRAAGGLSPRLLPHLWGVGVMEIDHQQPGGAVVSGEGAGIGVGEAGDWGEGRERARLACLLLANGVFLYGHLLVLFALLSRLSATMFAISSGYARAALVFVLLLALRGSAAGPRIVGMSLATLAVSAHFYRAYVRGRATSSLLNSADNADGLPCDADDGGEAG 693
            LPATAARP ATNAAWVVKPASYSLP                    SSTELHLAEGRQLSLAPGQQP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NGRGSASAGTIATLILASLLTYALYNASVEALAGQRTRLSVPRRHPSSASA GGSLIGTSGRDVPAEI T    XXXXXXXX       DDHLSDGGIG KVEYYERVPPAVSWGGGANGGE  XX  AVAGWGKGVSVVTVSAWQTLAALGVGFLMSRFWRRFRRPEVRALSDAERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAAFFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKMALDDYGLDEISALFSGAKMTAGLQCLILLVVEVPRAA GLSPRLLPHLWGVGVMEID QQPGG VVSGEGAGIGVGEAGDWGEGRERARLACLLLANGVFLYGHLLVLFALLSRLSATMFAIS                RGSAAGPRIVGMSLATLAVSAHFYRAYVRGRATSSLLNS DNA+GLPCDADDGGEAG
Sbjct:  119 LPATAARPLATNAAWVVKPASYSLPPPNATALAVTAAAPAHAPPPSSTELHLAEGRQLSLAPGQQPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NGRGSASAGTIATLILASLLTYALYNASVEALAGQRTRLSVPRRHPSSASARGGSLIGTSGRDVPAEIGTTGGAXXXXXXXXTALLEDEDDHLSDGGIGSKVEYYERVPPAVSWGGGANGGEXXXXGAAVAGWGKGVSVVTVSAWQTLAALGVGFLMSRFWRRFRRPEVRALSDAERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAAFFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKMALDDYGLDEISALFSGAKMTAGLQCLILLVVEVPRAAAGLSPRLLPHLWGVGVMEIDQQQPGGPVVSGEGAGIGVGEAGDWGEGRERARLACLLLANGVFLYGHLLVLFALLSRLSATMFAIS----------------RGSAAGPRIVGMSLATLAVSAHFYRAYVRGRATSSLLNSGDNAEGLPCDADDGGEAG 705          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig144.2571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6Z7_9PHAE0.000e+086.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6G9_ECTSI2.380e-28289.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 376..395
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 529..586
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..356
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 357..375
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 587..609
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 664..1207
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 416..446
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 477..495
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 615..636
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 447..465
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 637..644
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 507..528
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 466..476
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 496..506
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 645..663
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 396..415
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 610..614
NoneNo IPR availableTMHMMTMhelixcoord: 447..469
NoneNo IPR availableTMHMMTMhelixcoord: 587..609
NoneNo IPR availableTMHMMTMhelixcoord: 396..418
NoneNo IPR availableTMHMMTMhelixcoord: 353..375
NoneNo IPR availableTMHMMTMhelixcoord: 645..664
NoneNo IPR availableTMHMMTMhelixcoord: 614..636

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig144contigE-siliculosus-1a_F_contig144:16631..24241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig144.2571.1mRNA_E-siliculosus-1a_F_contig144.2571.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig144 15924..25704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig144.2571.1 ID=prot_E-siliculosus-1a_F_contig144.2571.1|Name=mRNA_E-siliculosus-1a_F_contig144.2571.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1208bp
MQHEADMMLSSSTNRWRKRPPNQAGGATGGGSGSSSRRSPNTAAADRRHL
DPPPAVAVGAHSSRTGAEQQPHQFYYPATAGVSGGGHHLPATAARPSATN
AAWVVKPASYSLPPPNAAAAAVTAAAPAHAPPPSSTELHLAEGRQLSLAP
GQQPPSQQPQAGGRRRQGRGGYGGPLPPTTTTTQQFETYRQQQQQQPQQQ
QQQSSSGGGGGGGNGRGSASAGTIATLILASLLTYALYNASVEALAGQRT
RLSVPRRHPSSASAGGGSLIGTSGRDVPAEIVTTGGAAAGAAADNNALLE
DEDDHLSDGGIGFKVEYYERVPPAVSWGGGANGGEGDGGGAAVAGWGKGV
SVVTVSAWQTLAALGVGFLMSRFWRRFRRPEVRALSDAERTRRNKFLLVF
AAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAAFFCLLSLNVGMQRPGLAS
VPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKMALD
DYGLDEISALFSGAKMTAGLQCLILLVVEVPRAAGGLSPRLLPHLWGVGV
MEIDHQQPGGAVVSGEGAGIGVGEAGDWGEGRERARLACLLLANGVFLYG
HLLVLFALLSRLSATMFAISSGYARAALVFVLLLALRGSAAGPRIVGMSL
ATLAVSAHFYRAYVRGRATSSLLNSADNADGLPCDADDGGEAGGDATAAA
AAGGQGAISFVPPSPPPHRRRLPRLLRRDNDTSPAAAAPLSSSSCSSSYS
GPAGGEGGRAEDYSASSPSRRPAVGMTAAGGGGGGGKPGLFVPLLGTKLG
DRRRGLDGSGGGGGGGGRSTNSSSLSVPDSAAAAADGDGAPPSGFAWRWM
GLRPSETTATPPAVSAAGQLVDKQQQQQQQRLEDGVGGVGIEGNFGFPSR
QPRHHGGSEVLSPPAAFGGFAAEADATASAASFATDCSRGQDGGGYARED
RRKARNPQTGNHDFPAETFVGVEGTVETAPRRFGAPSPGSQQPYPPVSAS
SNSKSSGSSTAGSRSTGLLHQQQQQQRRSASRSVPFAPPPPPSFGSPAIA
GSATTASNSTAFAARRAGAPPTTAPPAGYPAATAAAAGGGRWGEGPSEGV
PPPAGRRGSGHGLGRPAAGVPRPFRRLGGDSVVGPREEEGGVAAGFRGAT
VGGGSRGLPTRDGGEGGAGGREVSGSTGATLSSPSTSSSSFSLNGFEVID
KEEDMWT*
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