prot_E-siliculosus-1a_F_contig1030.256.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1030.256.1
Unique Nameprot_E-siliculosus-1a_F_contig1030.256.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length494
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 716 bits (1848), Expect = 2.380e-256
Identity = 422/493 (85.60%), Postives = 427/493 (86.61%), Query Frame = 0
Query:    1 MTMTDRTEEFQRAVSAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRHADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGHKHGPRRGGKAASVLPFPSGNGGTRXXXXXXXXXXPQKSAVPPPWSAEGGRSSNGNNFSTGVGKGGYDAVGAMPRATETAXXXXXXXXXXXXXXTDSNGGFRAGPHTAPPFGSANGYVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 493
            MTMTDRT+EF  AVSAFRPTVT VNNSGEAA IRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQR+ADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDAL+LRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSS XXXXXXXXXXXX      XXXXXXXXXXX  KGHKHGPR+GGKAASVLPFPSGNGGTR          PQKSAVP PWSAEGGR+ NGNN STGVGKGGYDAVGAMPRATE A XXXXXXX      TDSNGGFRAGPHTAP FGSANGYVP                              RATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLG MFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR
Sbjct:    1 MTMTDRTKEFHGAVSAFRPTVTAVNNSGEAALIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRYADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSGXXXXXXXXXXXXTANLPSXXXXXXXXXXXDNKGHKHGPRKGGKAASVLPFPSGNGGTRAGGGTGGSSWPQKSAVPAPWSAEGGRNGNGNNCSTGVGKGGYDAVGAMPRATEPAAXXXXXXXR-----TDSNGGFRAGPHTAPTFGSANGYVPPAAGGGSGRAHAAAPPGFPPLRTEASRGGGRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 488          
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A835Z5V3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.590e-26
Identity = 70/184 (38.04%), Postives = 112/184 (60.87%), Query Frame = 0
Query:    3 MTDRTEEFQRAVSAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRHADG--GTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLF 184
            M DRT EFQ  +        V++        R Q +    + ++F +  +++A+  EGT++LI +L +LVGRKG SN+P  EI+DV +LF+GDM  +Q+++S+LQ   DG  G RG+P   SQR  H  +++  L++ AQE   AF+ AL  R AV ++ N+R++ +S +R V  + Q++ PLF
Sbjct:    1 MIDRTAEFQGCIR-------VLHQHDGRPDQRPQYEAP--QPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175          
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A835ZFW2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW2_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.010e-22
Identity = 49/72 (68.06%), Postives = 59/72 (81.94%), Query Frame = 0
Query:  417 MIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVF 488
            MIG+LG MFS+FS +VAAQEE V+HIEDDVE AH FA +G AHL++YYQ  SGNRGII+KV I+L   +WVF
Sbjct:    1 MIGELGHMFSKFSALVAAQEETVVHIEDDVEMAHGFAVDGHAHLSRYYQTISGNRGIIVKVLILLAFFVWVF 72          
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A7S2XXW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXW7_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.100e-14
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 0
Query:  398 VQVQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 493
             ++Q  SK RV+E+  +E  I +   MFS+ +TMVA Q E+V  I+DD+E A      G   L +YY I SGNRG+IIK+FI L+V I++F+ L +
Sbjct:   10 AELQTSSKQRVEEARSIEATISEFATMFSKMATMVAQQGELVTRIDDDMELALGNVSAGHTELTRYYSIISGNRGLIIKIFITLMVFIFLFVVLFK 105          
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: I2CQ48_NANGC (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ48_NANGC)

HSP 1 Score: 77.8 bits (190), Expect = 9.660e-14
Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = 0
Query:  401 QEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVF 488
            Q D+ +R+ E+  VEK I +LGQ FSR + +VAAQ EVVM I+DD+EAA    ++G A +  Y +I  GNR +I KVF +L+V I VF
Sbjct:   25 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVMRIDDDMEAALEDVQKGHAEMVNYLRIVKGNRAVIFKVFALLLVFIVVF 112          
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: F0Y6L6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L6_AURAN)

HSP 1 Score: 77.0 bits (188), Expect = 9.680e-14
Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 0
Query:  400 VQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVF 488
            +++ S+ R+D +H +EK IG LG++FSRFS++VA Q EVV  ++DDVE A    E G A L K  ++  GNR + +KVF +LI  I +F
Sbjct:    2 LEQTSRRRLDTAHNIEKEIGKLGEVFSRFSSLVAQQAEVVERLDDDVEGALGEVEMGHAELLKAQEVLRGNRALFLKVFAVLIALIVLF 90          
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A7S3H3X9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3X9_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.000e-11
Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 0
Query:  406 TRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLI 482
            +R +    V+K IG+L QMFS+ + +V AQEE++  I+ D+++     +EGQ HL KY+Q  S NRG+IIKVF++LI
Sbjct:  216 SRAEAVQNVQKTIGELAQMFSKMAVLVTAQEEMIQRIDSDLDSTITNVDEGQQHLLKYFQYISSNRGLIIKVFLILI 292          
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A4D9CWV4_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV4_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 7.260e-11
Identity = 42/88 (47.73%), Postives = 59/88 (67.05%), Query Frame = 0
Query:  401 QEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVF 488
            Q D+ +R+ E+  VEK I +LGQ FSR + +VAAQ EVV+ I+DD+EAA    ++G   +  Y +I  GNR +I KVF +L+V I VF
Sbjct:  278 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVVRIDDDMEAALEDVQKGHVEMVNYLRIVKGNRAVIFKVFALLLVFIVVF 365          
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A485LIS1_9STRA (Aste57867_21905 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS1_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.770e-10
Identity = 36/86 (41.86%), Postives = 62/86 (72.09%), Query Frame = 0
Query:  404 SKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 489
            +++R++++  VE MIG++G M+SR + ++A QEE++  IEDD+  AH+  E G   L KY+   S NR +I+K+F++L+V I++FL
Sbjct:  240 AQSRLNDAQNVEAMIGEIGGMYSRMTGLLANQEEMLGRIEDDMTTAHSNVEGGYEELMKYFSTVSSNRSLILKIFLVLLVFIYLFL 325          
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A165EVD4_EXIGL (t-SNARE n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165EVD4_EXIGL)

HSP 1 Score: 70.1 bits (170), Expect = 1.770e-9
Identity = 52/176 (29.55%), Postives = 88/176 (50.00%), Query Frame = 0
Query:    1 MTMTDRTEEFQRAVSAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRHADGGTRGSPPANSQRQM--HCAFIVTTLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVA 174
            M + DRT EF+  V + R        S  AA  R +T     K SEF  +AA++      T+  + +L +L  RK   ++   EIS++  + + D+AG+ K I+SLQ +    ++G   A +Q+Q+  H   +V  L+    + + AF+D L +R    K+  +R  +F +S   A
Sbjct:    1 MPVQDRTNEFRACVQSIR--------SRSAAPRRQRTAPTSSKRSEFSSMAANIGKDISSTTTKLSKLAQLAKRKTLFDDKPVEISELTYIIKQDIAGINKQIASLQSYVK--SQGQNKAGTQKQVDEHNHNVVILLQNKLADTSVAFKDVLEIRTKNMKESKDRTEQFMYSTAAA 166          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU27_9PHAE2.380e-25685.60t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z5V3_9STRA1.590e-2638.04Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZFW2_9STRA1.010e-2268.06t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2XXW7_9STRA1.100e-1444.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
I2CQ48_NANGC9.660e-1450.00t-SNARE coiled-coil homology domain-containing pro... [more]
F0Y6L6_AURAN9.680e-1446.07t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3H3X9_9STRA3.000e-1146.75Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A4D9CWV4_9STRA7.260e-1147.73t-SNARE coiled-coil homology domain-containing pro... [more]
A0A485LIS1_9STRA2.770e-1041.86Aste57867_21905 protein n=1 Tax=Aphanomyces stella... [more]
A0A165EVD4_EXIGL1.770e-929.55t-SNARE n=1 Tax=Exidia glandulosa HHB12029 TaxID=1... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 396..463
e-value: 1.8E-7
score: 40.8
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 401..463
score: 10.921
NoneNo IPR availableGENE3D1.20.5.110coord: 391..492
e-value: 3.5E-14
score: 54.3
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 378..489
coord: 3..186
NoneNo IPR availablePANTHERPTHR19957:SF3SYNTAXIN-5coord: 378..489
coord: 3..186
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 493..493
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..472
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 473..492
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 398..464
NoneNo IPR availableTMHMMTMhelixcoord: 472..491
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 45..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1030contigE-siliculosus-1a_F_contig1030:14078..18754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1030.256.1mRNA_E-siliculosus-1a_F_contig1030.256.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1030 13484..18803 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1030.256.1 ID=prot_E-siliculosus-1a_F_contig1030.256.1|Name=mRNA_E-siliculosus-1a_F_contig1030.256.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=494bp
MTMTDRTEEFQRAVSAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQL
AASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQ
KDISSLQRHADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDAL
LLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSAGGAGGGARRRRP
TANLASPPPPLPDEDDEDNKGHKHGPRRGGKAASVLPFPSGNGGTRGGGG
TGGSSWPQKSAVPPPWSAEGGRSSNGNNFSTGVGKGGYDAVGAMPRATET
AAAAAAAAAAAAAARTDSNGGFRAGPHTAPPFGSANGYVPPAAGGGSGSA
HAAAPPGFPPPPTEASRGGGRATGLRKRPGREDGGDAEEESRRAAWQVQV
QEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAH
AFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010989SNARE
IPR000727T_SNARE_dom