Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match:
A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)
HSP 1 Score: 719 bits (1856), Expect = 4.340e-254
Identity = 422/493 (85.60%), Postives = 427/493 (86.61%), Query Frame = 2
Query: 50 MTMTDRTEEFQRAVSAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRHADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGHKHGPRRGGKAASVLPFPSGNGGTRXXXXXXXXXXPQKSAVPPPWSAEGGRSSNGNNFSTGVGKGGYDAVGAMPRATETAXXXXXXXXXXXXXXTDSNGGFRAGPHTAPPFGSANGYVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 1528
MTMTDRT+EF AVSAFRPTVT VNNSGEAA IRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQR+ADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDAL+LRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSS XXXXXXXXXXXX XXXXXXXXXXX KGHKHGPR+GGKAASVLPFPSGNGGTR PQKSAVP PWSAEGGR+ NGNN STGVGKGGYDAVGAMPRATE A XXXXXXX TDSNGGFRAGPHTAP FGSANGYVP RATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLG MFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR
Sbjct: 1 MTMTDRTKEFHGAVSAFRPTVTAVNNSGEAALIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRYADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSGXXXXXXXXXXXXTANLPSXXXXXXXXXXXDNKGHKHGPRKGGKAASVLPFPSGNGGTRAGGGTGGSSWPQKSAVPAPWSAEGGRNGNGNNCSTGVGKGGYDAVGAMPRATEPAAXXXXXXXR-----TDSNGGFRAGPHTAPTFGSANGYVPPAAGGGSGRAHAAAPPGFPPLRTEASRGGGRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 488
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match:
A0A835Z5V3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V3_9STRA)
HSP 1 Score: 115 bits (287), Expect = 6.490e-26
Identity = 60/142 (42.25%), Postives = 97/142 (68.31%), Query Frame = 2
Query: 182 SEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRHADG--GTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLF 601
++F + +++A+ EGT++LI +L +LVGRKG SN+P EI+DV +LF+GDM +Q+++S+LQ DG G RG+P SQR H +++ L++ AQE AF+ AL R AV ++ N+R++ +S +R V + Q++ PLF
Sbjct: 34 TDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match:
A0A835ZFW2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW2_9STRA)
HSP 1 Score: 103 bits (257), Expect = 4.160e-23
Identity = 49/72 (68.06%), Postives = 59/72 (81.94%), Query Frame = 2
Query: 1298 MIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVF 1513
MIG+LG MFS+FS +VAAQEE V+HIEDDVE AH FA +G AHL++YYQ SGNRGII+KV I+L +WVF
Sbjct: 1 MIGELGHMFSKFSALVAAQEETVVHIEDDVEMAHGFAVDGHAHLSRYYQTISGNRGIIVKVLILLAFFVWVF 72
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match:
A0A7S2XXW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXW7_9STRA)
HSP 1 Score: 83.2 bits (204), Expect = 1.390e-15
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 2
Query: 1241 VQVQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 1528
++Q SK RV+E+ +E I + MFS+ +TMVA Q E+V I+DD+E A G L +YY I SGNRG+IIK+FI L+V I++F+ L +
Sbjct: 10 AELQTSSKQRVEEARSIEATISEFATMFSKMATMVAQQGELVTRIDDDMELALGNVSAGHTELTRYYSIISGNRGLIIKIFITLMVFIFLFVVLFK 105
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match:
F0Y6L6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L6_AURAN)
HSP 1 Score: 79.3 bits (194), Expect = 2.230e-14
Identity = 41/90 (45.56%), Postives = 61/90 (67.78%), Query Frame = 2
Query: 1247 VQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 1516
+++ S+ R+D +H +EK IG LG++FSRFS++VA Q EVV ++DDVE A E G A L K ++ GNR + +KVF +LI I +F+
Sbjct: 2 LEQTSRRRLDTAHNIEKEIGKLGEVFSRFSSLVAQQAEVVERLDDDVEGALGEVEMGHAELLKAQEVLRGNRALFLKVFAVLIALIVLFV 91
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match:
I2CQ48_NANGC (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ48_NANGC)
HSP 1 Score: 80.1 bits (196), Expect = 2.270e-14
Identity = 44/89 (49.44%), Postives = 61/89 (68.54%), Query Frame = 2
Query: 1250 QEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 1516
Q D+ +R+ E+ VEK I +LGQ FSR + +VAAQ EVVM I+DD+EAA ++G A + Y +I GNR +I KVF +L+V I VF+
Sbjct: 25 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVMRIDDDMEAALEDVQKGHAEMVNYLRIVKGNRAVIFKVFALLLVFIVVFV 113
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match:
A0A7S3H3X9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3X9_9STRA)
HSP 1 Score: 77.0 bits (188), Expect = 1.200e-11
Identity = 37/84 (44.05%), Postives = 57/84 (67.86%), Query Frame = 2
Query: 1265 TRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 1516
+R + V+K IG+L QMFS+ + +V AQEE++ I+ D+++ +EGQ HL KY+Q S NRG+IIKVF++LI + F+
Sbjct: 216 SRAEAVQNVQKTIGELAQMFSKMAVLVTAQEEMIQRIDSDLDSTITNVDEGQQHLLKYFQYISSNRGLIIKVFLILIFFVVFFV 299
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match:
A0A4D9CWV4_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV4_9STRA)
HSP 1 Score: 77.0 bits (188), Expect = 2.360e-11
Identity = 42/89 (47.19%), Postives = 60/89 (67.42%), Query Frame = 2
Query: 1250 QEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 1516
Q D+ +R+ E+ VEK I +LGQ FSR + +VAAQ EVV+ I+DD+EAA ++G + Y +I GNR +I KVF +L+V I VF+
Sbjct: 278 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVVRIDDDMEAALEDVQKGHVEMVNYLRIVKGNRAVIFKVFALLLVFIVVFV 366
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match:
A0A485LIS1_9STRA (Aste57867_21905 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS1_9STRA)
HSP 1 Score: 77.0 bits (188), Expect = 8.690e-11
Identity = 36/89 (40.45%), Postives = 64/89 (71.91%), Query Frame = 2
Query: 1259 SKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLM 1525
+++R++++ VE MIG++G M+SR + ++A QEE++ IEDD+ AH+ E G L KY+ S NR +I+K+F++L+V I++FL ++
Sbjct: 240 AQSRLNDAQNVEAMIGEIGGMYSRMTGLLANQEEMLGRIEDDMTTAHSNVEGGYEELMKYFSTVSSNRSLILKIFLVLLVFIYLFLVVL 328
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match:
A0A6G0WSE7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSE7_9STRA)
HSP 1 Score: 72.0 bits (175), Expect = 6.120e-10
Identity = 33/86 (38.37%), Postives = 60/86 (69.77%), Query Frame = 2
Query: 1259 SKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 1516
++ R++++ +E I ++G M+SR + ++A+QEE++ IEDD+ AHA E G L KY+ S NR +I+K+F++L++ I++FL
Sbjct: 224 AQARLNDAQHMEATISEIGGMYSRMTGLLASQEEMLGRIEDDMTTAHANVESGYEELMKYFSTVSSNRSLILKIFLILLLFIYLFL 309
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 4.34e-254 / Id = 85.60 Expect = 6.49e-26 / Id = 42.25 Expect = 4.16e-23 / Id = 68.06 Expect = 1.39e-15 / Id = 44.79 Expect = 2.23e-14 / Id = 45.56 Expect = 2.27e-14 / Id = 49.44 Expect = 1.20e-11 / Id = 44.05 Expect = 2.36e-11 / Id = 47.19 Expect = 8.69e-11 / Id = 40.45 Expect = 6.12e-10 / Id = 38.37 Sequence A0A6H5KU27_9PHAE A0A835Z5V3_9STRA A0A835ZFW2_9STRA A0A7S2XXW7_9STRA F0Y6L6_AURAN I2CQ48_NANGC A0A7S3H3X9_9STRA A0A4D9CWV4_9STRA A0A485LIS1_9STRA A0A6G0WSE7_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 1482 Model size 2125 Exons 7 Ec32 ortholog Ec-06_004720.1 Ec32 ortholog description Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) Hectar predicted targeting category other localisation BRITE ko00000,ko00001,ko04131 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. U EggNOG OGs KOG0812@1,KOG0812@2759 EggNOG free text desc. vesicle docking GOs GO:0000003,GO:0000139,GO:0000149,GO:0000278,GO:0000280,GO:0000281,GO:0000902,GO:0000910,GO:0001505,GO:0002164,GO:0002376,GO:0002520,GO:0002790,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0005801,GO:0005886,GO:0006810,GO:0006836,GO:0006873,GO:0006875,GO:0006878,GO:0006886,GO:0006887,GO:0006888,GO:0006891,GO:0006900,GO:0006901,GO:0006903,GO:0006904,GO:0006906,GO:0006996,GO:0007030,GO:0007049,GO:0007112,GO:0007140,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0008104,GO:0008150,GO:0008283,GO:0008361,GO:0009306,GO:0009653,GO:0009791,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010256,GO:0010604,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016197,GO:0016482,GO:0017156,GO:0019222,GO:0019725,GO:0019953,GO:0022402,GO:0022406,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0023061,GO:0030003,GO:0030097,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031201,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032940,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033116,GO:0033206,GO:0034498,GO:0034613,GO:0035166,GO:0035167,GO:0042147,GO:0042175,GO:0042176,GO:0042592,GO:0042802,GO:0042803,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045055,GO:0045184,GO:0045732,GO:0045786,GO:0045930,GO:0046903,GO:0046907,GO:0046916,GO:0046983,GO:0047485,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048232,GO:0048278,GO:0048280,GO:0048284,GO:0048285,GO:0048308,GO:0048313,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048534,GO:0048542,GO:0048569,GO:0048609,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051726,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055082,GO:0060255,GO:0060305,GO:0061024,GO:0061025,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0090114,GO:0090166,GO:0090174,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098771,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:0098916,GO:0099003,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140013,GO:0140029,GO:0140056,GO:1903008,GO:1903046,GO:1903047,GO:1903358 KEGG Pathway ko04130,map04130 KEGG ko ko:K08490 Preferred name STX5 Seed eggNOG ortholog 2880.D8LR19 Seed ortholog evalue 6.1e-213 Seed ortholog score 746.9 Taxonomic scope Eukaryota
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1030.256.1
>prot_E-siliculosus-1a_F_contig1030.256.1 ID=prot_E-siliculosus-1a_F_contig1030.256.1|Name=mRNA_E-siliculosus-1a_F_contig1030.256.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=494bp
MTMTDRTEEFQRAVSAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQL back to top mRNA from alignment at E-siliculosus-1a_F_contig1030:13484..18803-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1030.256.1 ID=mRNA_E-siliculosus-1a_F_contig1030.256.1|Name=mRNA_E-siliculosus-1a_F_contig1030.256.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5320bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1030:13484..18803- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GCAGTCCTAGGAGCGAGAGGGCGAGACTGCCAAGAGGAGGTAGAGAGAC A
TGACCATGACGGACCGAACCGAGGAATTCCAACGCGCGGTCAGTGCCTTC
CGTCCCACAGTCACGGTGGTCAACAACAGCGGGGAGGCAGCGGCAATCAG
GGCGCAGACCGACCTCGGGTACAGAAAGACGTCGGAGTTTCTCCAGCTCG
CTGCAAGCGTTGCAGTCGGCTTCGAGGGCACGTCCAGGCTG GTGAGTGTC
TTCTTTCCTGCTAGAAGCTACAGGGCGTGGGTGGTAGGGACGTCTTGCTA
GTTGGCAGAGGAGCGCGAGTGTCACGTTTGCTATGGGAATGCGTCGTAGT
ACTACTGCTGTAGATGGGACATTGAGTTGCACATATGCTACACGCCGTCG
GTTGTTTGCGGAGACCTTGTGGGGGGAATTCGACGAAGAATATGCGCAAG
GCAACAACAATTGCAGGTCCAGTAGGCAACCCTTCTCTTGCACGGAAACA
TTTGGCACGCCTGCTGAATACTTTGCTGGAATTTCGGCGGCCTCATTGTT
GTGCTTGGGGATGCGCAGCAGTAATATTGAAACCCCTCAAGTGTCGTGTC
CAGCAGACAAATCGACCAATCATGAAGGCACACCACTCTTTATTCTCTAT
GTAAATGATGCTCTCACGAGGAACAAACAGGACAACACTGACTGGCGACC
AGAGCACGCGGCCTTTTGCGGCGGTCGTCCGTTTTTAGAAACGTTTTGTG
CATATCATGTCGTACAGGCCGGTGTAACACCAACGAGAGGGCTGACAAGT
GGTAGCGTCTGGTCGCCAAATGTGTATGATAGTGACGACAACAATGCCAT
CTGTTTTTTATACTAATATACTGCACTGCGTATTACCGCCTCTCGGGCAC
GAAGTATACGCTGCTGGGGTCGGTTGTAACGGCCACGTATTTCGACCGTG
TTGATGTGCGGTGTATTCTCACCAAATAGTGCAACGCACGTACCACTTGC
TTCGGAAGCAAATTCATTCTCTCGAGAAAAATCGAGATACGATGAGTTGT
TTTCATATGTGGGCCTGCCTCCCTACTCCCGTCTTTTTTCTTTTTTTTTC
CTGCATCAGATCGGGCGGCTGAAGAAGCTCGTCGGACGCAAGGGGTTCAG
CAACAACCCGGCGGCCGAGATAAGCGACGTCATGAAGCTCTTCGAGGGGG
ACATGGCCGGCCTACAGAAAGACATATCGTCGCTGCAGAG GTGGGTCTCG
CGTGCGCATCACGCACGCACACCGGGAGAGGAAAATATTAACATTTCCCC
CTAAGGTACCTACTCTTCGATGGAAAGCCACCAAGGAATAGACCGTGATA
GTTCGCCGGCCCTGCATGGCCATCATGTGCAAGATGGGTCCTCTACGACA
CCACGGCTGTGGCTCTCGGGCCGTTGCCCTTTCGCTTCGCTTCGCGTTTC
GTTGTGGTGAGGTCGGCAGGCTGCGTTTCATCCTCCTACCCCGTGCGTGA
TGAAATACGTGGCCCTCAATGTCTTGCATTGTGCGGCAGGAGCTATTTGA
CCTGCTTCTGATAAAGCGGGGCGCACACTTTCCAAAACAGACGACGGAGA
CTCTACCGTACGTCGGGGAGAAAAAGAACAGTCAGATTTTATTTTCCACG
CGGCTTATCCCCACCCCGCGCCAACCTCTCCCTCCCTCCTCTCAAACTGC
CCTTGTCTGTCTGTACTAAATTTATCAGGCACGCAGATGGCGGCACCAGG
GGGAGCCCGCCGGCCAACAGCCAGCGGCAGATGCACTGCGCGTTTATCGT
GACGACGCTGCGGAGAAGCGCGCAGGAGCACACGAAGGCCTTTCGTGACG
CGCTCTTGCTGCGAGCAGCG GTGAGCGTGAAGAGGAGAGAAGGTTGCAAC
GCGTATTGCCGCTTTCTGTGACATGTGTTAAGGGGTACATGTAGGTTGTC
TTCCCTCGGGGCGCGAGGAGGAGAGCGGGGTCGGAGGGAAGCGAATGCGT
TGTACCCGGAGAGGCAAGTGGAATTTCTTGCGATTGCAAAGGCTCTCCCG
GCTTGTATTGGTAGGCGCGTCCTCATTGTTGGCGTTCCGTGTCGTGGTAA
TCCATTGCATTGACATTGGGTCTGTCGAATAGGATAAGTGGAGTCGCTGT
TGGATTTCCTCGTGATGTGCGTGCAGTAGTTATCGATCTCAGTATGGAGT
CTCATGCAGTGATGATTCGCACTCATGTATTTATAGCCTACACACGATAA
GTGAACCGCAACCAACCCCGTGCGCATTCACGATGGTGTGTTTGCTTGAA
ACGAAACCCAGGTGGAGAAGCAGCAGAACGAACGCCAGCGAAAGTTCTCG
CACTCCCGCGGCGTCGCCCCCGCGACCCAGCTGGACTACCCTCTCTTCGG
AAGCAGCGCCGGCGGCGCCGGGGGGGGGGCACGACGCCGCCGCCCGACGG
CCAATCTGGCGTCCCCCCCGCCGCCTCTCCCCGACGAAGACGACGAGGAC
AACAAGGGGCACAAACACGGACCCCGAAGAGGCGGAAAGGCTGCGTCGGT
GTTGCCGTTCCCTTCCGGCAATGGAGGCACAAGGGGGGGGGGGGGTACAG
GCGGCTCTTCCTGGCCTCAGAAATCCGCGGTGCCCCCGCCGTGGTCGGCA
GAGGGGGGGAGAAGCAGCAACGGCAACAATTTTTCGACGGGCGTTGGCAA
AGGAGGGTACGACGCCGTCGGAGCAATGCCACGAGCAACAGAAACGGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCTGCGAGAACAGACAGC
AATGGAGGGTTCAGGGCGGGGCCCCATACGGCGCCGCCCTTTGGCAGTGC
CAACGGTTACGTACCACCGGCTGCGGGGGGTGGCAGCGGGAGCGCGCATG
CGGCGGCTCCGCCAGGGTTTCCGCCTCCTCCGACCGAGGCGTCTAGAGGC
GGTGGGCGCGCCACTGGGCTGCGGAAACGACCAG GTGGGGTGCCCTGATA
GAACACCAGCAGGTCACGGAAAGTGCTGCGCGTGGAGAGCGGGGGAGGGG
ATCATGTTTGCGTTGACGGATTGTTCGTCAGGGTGCTTTCTGCGGTTTAG
CGTTCTCGCCTTTCGCTCCTTTTGTCTACACCAGTAGGAAACAGCACCAG
CACTTGCTCATGGGTTATTTTGGCGACTATTTGGTGTTTGTTTTAGACCG
TGCCGGTGCAACTCTTTCGTGGTGGCTGCTGTCCTAGTTCCTCCAACCTT
CTCGTCTTGATTTTTCCTTGCGTCTAAACGCCTCATGCAGTGGTTGGTTG
CCTTCTCTCTGTATATGCAGTCGGGCTCTCCTGCTTCGTTTCGTGCACCA
CTCCTTCGAAATTCCCTTCTGGCGCATTGCTTTGGTGCTTGCGTTCACAA
CGAACGAGCCACTGAGTTGTTGCGTTCGTTCGCTGAGGTAGAGTGAACGA
GATTTGTACGATAAACGGCAGGGAGGCTCATAAACCAAGCCCAAAATTAT
CCCCTCCCCACGCCACACACCCCGTTACGTCATGTCCCGTCGCCCCCCAG
GGCGAGAGGACGGGGGTGACGCAGAGGAGGAGTCCCGCCGAGCGGCGTGG
CAAGTTCAGGTCCAAGAGGACTCCAAGACCAGAGTGGACGAATCACACAA
G GTAAATGACACATCCAAACCTCCCAGTAAGTACTGCTTACCTTATATGG
TACGAACGTACGCTAGCCTTTGTTGTGGCCGATACTGCTGTTATTGCCCA
GACTACGCCGACTCCCGCCACCACAGCCGCCGCCACACGACCCGCCCTGC
TATATGGGCGTTACTTCGGCGGGACGAAAAGACTGCCAGGGGCGGGGTAT
CCCCCCGGACCCGTGAATGTTGCGTGTTGGGATCAGCGCGACTCCACAAA
ACGGCACCACCAGACAGCGGCGTTTACTGCGAACAAGGCGCAAAATTCTG
AAGAAAGAAGAGATGGTGAAGCTTGAGCCGATACCAAAGTAGACAGTAGA
TGGGAGAGAACGTGAGGCCAGAAAGTATGCGGTCAGTCGATTCCATATTT
TTTCATTCTTCATCTCCGTGACCAGCGCACTCGAAAACCTGACTAAAAAC
AAATACACTTAAACGAAACGAAATGTTGAAAAAAACAAAAAAACAAAATC
ACAGGTGGAGAAGATGATCGGCGATTTGGGGCAGATGTTCAGCCGTTTCT
CGACGATGGTGGCGGCGCAGGAGGAGGTGGTTATGCACATCGAGGACGAC
GTCGAGGCCGCTCACGCCTTCGCCGAAGAGGGACAGGCACACCTCGCCAA
GTGAGTATCCTGGGGAACGGGATATACCATGCCGTCCAACAACGAAAATG
CGTCAGCAGGAGAATATTCATTACGATTTTTTGCTTTCGGTGGCGGGTCA
CAGAGAGACGATGGAATGTTGCTGCTTCGCAAGACCGTGTTAGTGTTACT
GCTCCGCAAGACTTACGATTTGTGGTACCACCTTGCGGAACGGGGAGAGA
GAGGCACAAATCGCAAGGCGCTTATGCTTTTTTCGCGTTGTTTGGTATGC
AAAGCTACTCTTGTTTTTTCTCAACGCGCCTCGCTTCTTCGACTTGTTCG
CGCTTTCTGGTTGCTGTTGCTTCCCGCAGGTACTACCAGATTACGAGCGG
CAACCGGGGAATCATCATCAAGGTATTCATCATGTTGATCGTTTGCATCT
GGGTCTTCCTGGGCCTTATGAGATGA CACCCCCCTTCTTGTCCGCTCCAT
TAATTTTGCGTCGCCCCCCGGCCAAGAAATGCGGAGAGCGCCGACATACA
TCAACTGCGTTTGCACCAACGCCGTTGCCATCGAAGGGCTTTCGTCTTGA
TCACAGCGCATGTGGGCAAGGCATTATACGTTCGTGGTCTGGTCGATGCC
CTTTGCCGGCATTAGTGCGGGTGGCGATGTATCTCTCGTGTCTTTCGGGG
TTACATGTTTGTAGCCGAGCGATATTTTGCAAGTTCGACGAGGGCGGGAG
GTCGCGCGTTGGGGGGGGGATGCCATCACGTGATCAGGAGTTCTCTACAG
CCCCATTCGTGCCTAGGAGCCCCGGCAGCGTTGCTATTTAGGTTTGTGTT
CCTCGCGTGGCACCCTTTGGCCGTATTGCGTCAGTCGGCCTGTCGAGTAG
TTGACTGGCCAGATAATGCAGGCAAGAACGCGTGCTTAGACAGCTTTGCA
TCGGCTGGGTCACGATGTATGTCATTTTGACATGAGGGTGTGTCCACCTG
CGAAGGAAGGGGCCTGAAAGGTGTGCATGTTTACCCTCTTCTTCACTTGG
CTGTTTTGCGCCCACTCGGC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1030:13484..18803-
>mRNA_E-siliculosus-1a_F_contig1030.256.1 ID=mRNA_E-siliculosus-1a_F_contig1030.256.1|Name=mRNA_E-siliculosus-1a_F_contig1030.256.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2964bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1030:13484..18803- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top