prot_E-siliculosus-1a_F_contig14372.2564.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14372.2564.1
Unique Nameprot_E-siliculosus-1a_F_contig14372.2564.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length133
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig14372.2564.1 vs. uniprot
Match: D8LJ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ22_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 2.220e-73
Identity = 121/132 (91.67%), Postives = 122/132 (92.42%), Query Frame = 0 
Query:    1 MRLVRAKFLKDFAPLHRLGLVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLNNARASGSGGGGSAGPDGSAEEAIAKESAALCDNTVVLDGEGMRSALRLAGHPVNAPAKELLALLESLVLRCASSK 132
            MRLVRAKFLKDFAPLHRLGLVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLNNARASG       GPDGSAEEAIAKESAALCDNTVVLDGEGMRSALRLA HPVNAPAKELLALLESLVLR A S+
Sbjct:    1 MRLVRAKFLKDFAPLHRLGLVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLNNARASGXXXXXX-GPDGSAEEAIAKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLRAARSR 131
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BLAST of mRNA_E-siliculosus-1a_F_contig14372.2564.1 vs. uniprot
Match: A0A6H5L4I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I3_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.070e-55
Identity = 105/120 (87.50%), Postives = 106/120 (88.33%), Query Frame = 0 
Query:   15 LHRLGLVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLNNARASGSGGGGSA--GPDGSAEEAIAKESAALCDNTVVLDGEGMRSALRLAGHPVNAPAKELLALLESLVLRCASSK 132
            LHRL LVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLN ARASG         GPDGSAEEAIAKESAALCDNTVVLDGEGMRSALRLA HPVNAPAKELLALLESLVLR A S+
Sbjct:  826 LHRLSLVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLNTARASGXXXXXXXXXGPDGSAEEAIAKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLRAARSR 945
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14372.2564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ22_ECTSI2.220e-7391.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4I3_9PHAE2.070e-5587.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14372contigE-siliculosus-1a_F_contig14372:189..1023 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14372.2564.1mRNA_E-siliculosus-1a_F_contig14372.2564.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14372 189..1023 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14372.2564.1 ID=prot_E-siliculosus-1a_F_contig14372.2564.1|Name=mRNA_E-siliculosus-1a_F_contig14372.2564.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=133bp
MRLVRAKFLKDFAPLHRLGLVWCERAAPPLLLADDSGEGGSLWRDCLAIV
RNLTLLNNARASGSGGGGSAGPDGSAEEAIAKESAALCDNTVVLDGEGMR
SALRLAGHPVNAPAKELLALLESLVLRCASSKL
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