prot_E-siliculosus-1a_F_contig143.2529.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig143.2529.1
Unique Nameprot_E-siliculosus-1a_F_contig143.2529.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length293
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig143.2529.1 vs. uniprot
Match: D8LQ97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ97_ECTSI)

HSP 1 Score: 507 bits (1305), Expect = 1.420e-180
Identity = 264/271 (97.42%), Postives = 265/271 (97.79%), Query Frame = 0 
Query:   22 MERDYYNADPRLVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTAGDAARGGLSEPGGVKVGDVESSGGRTALAGSLSPKRPRKCVLVDNTSKKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAAAAACGPDGKGDRGG 292
            MERDYYNADP+LVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTAGDAARGGLSEPGGVKVGD ESSGGRTALAGSLSPKRPRKCVLVDNTSKKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAAA AC PDG   RGG
Sbjct:    1 MERDYYNADPKLVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTAGDAARGGLSEPGGVKVGDGESSGGRTALAGSLSPKRPRKCVLVDNTSKKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAAATACVPDGNRGRGG 271
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BLAST of mRNA_E-siliculosus-1a_F_contig143.2529.1 vs. uniprot
Match: A0A6H5KKZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ7_9PHAE)

HSP 1 Score: 505 bits (1301), Expect = 5.710e-178
Identity = 267/292 (91.44%), Postives = 271/292 (92.81%), Query Frame = 0 
Query:    1 MARLEAKLGPSSETLRVIRQEMERDYYNADPRLVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTAGDAARGGLSEPGGVKVGDVESSGGRTALAGSLSPKRPRKCVLVDNTSKKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAAAAACGPDGKGDRGG 292
            MARLEAKLGPSSETLRVIRQEMERDYYNAD RLVDPLLARVIR+LKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLL          VG KTAGDAARGGLSEPGGVKVGD ESSGGRTALAGSLSP+RPRKCVLVDNTSKKCERA ETFARHAA AGGGLELHTLHFTEAENMVDSPEALRQLR+ILARL+ERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAA  AC PDGK  R G
Sbjct:  107 MARLEAKLGPSSETLRVIRQEMERDYYNADLRLVDPLLARVIRSLKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLXXXXXXXXXXVGEKTAGDAARGGLSEPGGVKVGDGESSGGRTALAGSLSPRRPRKCVLVDNTSKKCERAVETFARHAAMAGGGLELHTLHFTEAENMVDSPEALRQLRVILARLQERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAAEVACVPDGKSGRSG 398
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BLAST of mRNA_E-siliculosus-1a_F_contig143.2529.1 vs. uniprot
Match: A0A835YVM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM2_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.000e-21
Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 0 
Query:   11 SSETLRVIRQEMERDYYNADPRLVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMV 96
            +SE +R I+ EMER+YY++D +LVDPLLAR++R LK+QGH VFGLTSN     H+   +  LA+YKIRFS P +RGELP    L V
Sbjct:   99 ASEVVRKIQAEMEREYYDSDIKLVDPLLARLVRGLKVQGHHVFGLTSNEPFSEHSITTVAALAQYKIRFSDPWIRGELPLCALLFV 184
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig143.2529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQ97_ECTSI1.420e-18097.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKZ7_9PHAE5.710e-17891.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YVM2_9STRA5.000e-2156.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig143contigE-siliculosus-1a_F_contig143:8496..10615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig143.2529.1mRNA_E-siliculosus-1a_F_contig143.2529.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig143 7369..12868 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig143.2529.1 ID=prot_E-siliculosus-1a_F_contig143.2529.1|Name=mRNA_E-siliculosus-1a_F_contig143.2529.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=293bp
MARLEAKLGPSSETLRVIRQEMERDYYNADPRLVDPLLARVIRALKIQGH
SVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPV
SRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTAGDAAR
GGLSEPGGVKVGDVESSGGRTALAGSLSPKRPRKCVLVDNTSKKCERAAE
TFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIG
VDLIAEDILVTPVGGVRRGAGDKVKAAAAAACGPDGKGDRGG*
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