prot_E-siliculosus-1a_F_contig1029.245.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1029.245.1
Unique Nameprot_E-siliculosus-1a_F_contig1029.245.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length151
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1029.245.1 vs. uniprot
Match: D7FLY0_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLY0_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 2.890e-99
Identity = 146/150 (97.33%), Postives = 149/150 (99.33%), Query Frame = 0 
Query:    1 MLNKGARINNRLKNAARAVSSALNKDSREAGADGDDDSKVPTKTELSSLTSKMDSDKTGKVDFGSFFAAMAAFMKPQYGREKLDKAFDEISGGLDEIDASFLHRTMVHLGQSTIRYADCEAMICEVDRNGHGRISKRDFHHLQTCTTDNI 150
            MLNKGARINNRLKNAARAVSSALNKDSREAGADGDDDSKVPTK ELSSLTSKMDSDKTGKVDFGSFFAAMAAFMKP+YGREKLD+AFDEISGGLDEIDA+FLHRTMVHLGQSTIRYADCEAMICEVDRNGHGRISKRDFHHLQTCTTDNI
Sbjct:    1 MLNKGARINNRLKNAARAVSSALNKDSREAGADGDDDSKVPTKAELSSLTSKMDSDKTGKVDFGSFFAAMAAFMKPKYGREKLDRAFDEISGGLDEIDATFLHRTMVHLGQSTIRYADCEAMICEVDRNGHGRISKRDFHHLQTCTTDNI 150
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BLAST of mRNA_E-siliculosus-1a_F_contig1029.245.1 vs. uniprot
Match: A0A835YZ87_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ87_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.750e-14
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0 
Query:   40 VPTKTELSSLTSKMDSDKTGKVDFGSFFAAMAAFMKPQYGREKLDKAFDEISGGLDE-------IDASFLHRTMVHLGQSTIRYADCEAMICEVDRNGHGRISKRDF 139
            +PT  EL  + + MD DKTG +DF SFF+ +A  +KP Y  + L+ AF  I G  +        +    L   M  LGQ  +   DC+ ++ E+DR G G +S+ DF
Sbjct:    3 IPTAQELEDMKAGMDPDKTGHIDFPSFFSVLAISLKPVYSEKMLNSAFAHIVGVPESAISDDTVLSRGQLRACMHRLGQVRLSLDDCDDIVREMDRTGRGAVSRADF 109
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1029.245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLY0_ECTSI2.890e-9997.33EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YZ87_9STRA6.750e-1436.45EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 105..143
e-value: 2.1E-5
score: 26.3
NoneNo IPR availableGENE3D1.10.238.10coord: 10..96
e-value: 1.5E-7
score: 33.4
NoneNo IPR availablePANTHERPTHR23050CALCIUM BINDING PROTEINcoord: 39..145
NoneNo IPR availablePANTHERPTHR23050:SF330CALMODULIN-LIKE PROTEIN 8coord: 39..145
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 96..142
e-value: 7.3E-4
score: 19.3
coord: 42..71
e-value: 0.036
score: 13.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 114..149
score: 8.516
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 41..76
score: 7.874
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 39..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1029contigE-siliculosus-1a_F_contig1029:36549..38040 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1029.245.1mRNA_E-siliculosus-1a_F_contig1029.245.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1029 36549..38040 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1029.245.1 ID=prot_E-siliculosus-1a_F_contig1029.245.1|Name=mRNA_E-siliculosus-1a_F_contig1029.245.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=151bp
MLNKGARINNRLKNAARAVSSALNKDSREAGADGDDDSKVPTKTELSSLT
SKMDSDKTGKVDFGSFFAAMAAFMKPQYGREKLDKAFDEISGGLDEIDAS
FLHRTMVHLGQSTIRYADCEAMICEVDRNGHGRISKRDFHHLQTCTTDNI
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom