Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1028.238.1 vs. uniprot
Match:
A0A6H5K6J9_9PHAE (IF3_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6J9_9PHAE)
HSP 1 Score: 1030 bits (2664), Expect = 0.000e+0
Identity = 627/733 (85.54%), Postives = 642/733 (87.59%), Query Frame = 1
Query: 88 MASRFLRADLRRACRPPSRPTSSNSNAFLSLATTRRDEPSVARSAYNPSALTAAALASPELLCSSVQSSGHAHSESATARSGSGEHGPRLPLPVTGMVPALTSAEQRYVGCWRG-AVGLGLCSRQQQQAGRRFLSSRSAKAGGQTLTNKKIKAEKILLVLETEDGSKEATTVSRQQALAAANAVNLDLVQVSSGKNDQVVCRLMDFKKEEYRKQKQKKANAKRIQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVLEANISLLKRSGNCLNVLQEKFEEQMEDYEGAVLKHSGGGNGYTRREIECIPKTVRPTTAKPTTSASETPGRYGGGTPEAGEKENPNPPPPRSVVVDKHVVREILSGAAETAQGGSEGELSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVAETASPLKLGSTEISLNDVELYDDLVDETVYDDGDLERERNEARRXXXXXXXXXAKEKVRNAARYAPTRGXXXXXXXXXWKAEIDRXXXXXXXNFDEESGWGEKDDRRTARRAPKGRDQQDAGRRGVVGGDSRAGASGRGGSPKVWSTGGGRRDGSLPNVPQQGAGSFRRGGRRGSDGGSGPREGPPPPSPARAARAPYKWRTSIADAKVAEAGEDREGASAKPWYSRSSSAASLARVARTKDGSGATGA---EEVRGFKARFGGGSMNLAPTNPAPAGTAKATSSKGFRSSSVTAPSAKVKPPRASEKGSDRGVGGQE 2274
MASRFLRADLRR RP RPTSSNSNAFLSLATTR DEPSVA SAY+PSALTAAAL S E LCSSVQSSGHAHSESAT+RSGS EHGPRLPLPVTGM ALTSAEQRYVGCWRG AVGLGLCSRQQQQAG+RFLSSRS KAGGQTLTNKKIKAEKILLVLETEDGSK ATTVSRQQALAAANAVNLDLVQVSSG+NDQVVCRLMDFKKEEYRK+KQ+KANAKRIQKKKEIRL GMIADHDFGRKVNDVKKYLERGDVVKVVLEANISLLKRSGNCLNVLQEKFEEQME+YEGAVLKHSGGGNGYTRREIECIPKTVRPTTAKPTTSASE PGR GGG PEAGEKENP PPP R VVDKHVV E++SGAA TA GGSEGELSSS XXXXXXXXXXXXXXXXXXXXXXXXEDVAETASPLKLGSTEI L+DVELYDDLVDETVYDDGD+ERERNEARR AKEKVRNAARYAPTRGXXXXXXXXX KAEID XXXXXXXNFDEESGWGEKDDRRTARR P GRDQQ GRRGV GGDSRAGAS GGSPKVWSTGGGRRDGS PNV QQGAGSFRRG RRGSDGGSGPREGPPP SPA AARAPYKWRTSIADAKV EAG DREG SAKPWY+ EEVRGFKARFGGGSMNL PTN TAKATSS+GFRSSSVTAPSAKV PP+ASE GSDRGV G+E
Sbjct: 1 MASRFLRADLRRVFRPLGRPTSSNSNAFLSLATTRPDEPSVAPSAYSPSALTAAALDSSEWLCSSVQSSGHAHSESATSRSGSSEHGPRLPLPVTGMFLALTSAEQRYVGCWRGGAVGLGLCSRQQQQAGKRFLSSRSGKAGGQTLTNKKIKAEKILLVLETEDGSKTATTVSRQQALAAANAVNLDLVQVSSGRNDQVVCRLMDFKKEEYRKKKQRKANAKRIQKKKEIRLRGMIADHDFGRKVNDVKKYLERGDVVKVVLEANISLLKRSGNCLNVLQEKFEEQMEEYEGAVLKHSGGGNGYTRREIECIPKTVRPTTAKPTTSASEAPGRDGGGIPEAGEKENPIPPPSRGGVVDKHVVLEVVSGAAATAHGGSEGELSSSNSGXXXXXXXXXXXXXXXXXXXXXXXXEDVAETASPLKLGSTEILLDDVELYDDLVDETVYDDGDIERERNEARRREDRQKREEAKEKVRNAARYAPTRGXXXXXXXXXXKAEIDXXXXXXXXNFDEESGWGEKDDRRTARRVPTGRDQQTGGRRGVAGGDSRAGASDSGGSPKVWSTGGGRRDGSFPNVLQQGAGSFRRGDRRGSDGGSGPREGPPPSSPALAARAPYKWRTSIADAKVVEAGGDREGTSAKPWYTSXXXXXXXXXXXXXXXXXXXXXXXXXEEVRGFKARFGGGSMNLTPTNSVAVRTAKATSSQGFRSSSVTAPSAKVNPPKASEVGSDRGVDGEE 733
BLAST of mRNA_E-siliculosus-1a_F_contig1028.238.1 vs. uniprot
Match:
D7FJ50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ50_ECTSI)
HSP 1 Score: 169 bits (427), Expect = 6.090e-46
Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 1
Query: 694 MDFKKEEYRKQKQKKANAKRIQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVLEANISLLKRSGNCLNVLQEKFEEQMEDYEGAVL 969
MDFKKEEYRK+KQKKANAKRIQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVLEANISLLKRSGNCLNVLQEKFEEQME+YEG +
Sbjct: 1 MDFKKEEYRKKKQKKANAKRIQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVLEANISLLKRSGNCLNVLQEKFEEQMEEYEGVRM 92
BLAST of mRNA_E-siliculosus-1a_F_contig1028.238.1 vs. uniprot
Match:
A0A2E1MXZ1_9BACT (Translation initiation factor IF-3 n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E1MXZ1_9BACT)
HSP 1 Score: 72.4 bits (176), Expect = 5.060e-11
Identity = 53/139 (38.13%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 526 NKKIKAEKILLVLETEDGSKEATTVSRQQALAAANAVNLDLVQVSSGKNDQVVCRLMDFKKEEYRKQKQKKANAKR--IQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVLEANISLLKRSGNCLNVLQEKFE 936
N IKA+K++L+ + K+ + R AL A NLDLVQ+S GK +Q VC+++DF K Y+KQK+ K N K I KEIRL +HD K+N KK+LE G+ +K + + R + L +L E
Sbjct: 13 NNSIKADKVMLI---DSEGKKRGVLDRSVALKIAQDNNLDLVQISDGK-EQPVCKILDFGKYLYKKQKKDKLNKKNQHIIHVKEIRLRLNTGEHDLVTKLNKAKKFLEDGNKMKFTIMFRGREISRKDSALEMLNNVAE 147
BLAST of mRNA_E-siliculosus-1a_F_contig1028.238.1 vs. uniprot
Match:
A0A2E2A1M5_9BACT (Translation initiation factor IF-3 n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E2A1M5_9BACT)
HSP 1 Score: 72.0 bits (175), Expect = 6.430e-11
Identity = 57/156 (36.54%), Postives = 85/156 (54.49%), Query Frame = 1
Query: 520 LTNKKIKAEKILLVLETEDGSKEATTVSRQQALAAANAVNLDLVQVSSGKNDQVVCRLMDFKKEEYRKQKQKKANAKR--IQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVLEANISLLKRSGNCLNVLQ---EKFEEQMEDYEGAVLK 972
L N I+AEK++L+ +D K+ VS Q AL+ A LDLVQ+S K D VC+++D+ K Y+KQK++K N K I KEIRL +HD K+N KK+LE G+ +K + + R + +L+ + F E E + A L+
Sbjct: 8 LINNFIRAEKVMLI---DDEGKQHGVVSLQMALSIAEEKKLDLVQISDSK-DNPVCKILDYGKYLYKKQKKEKQNRKNQHIIHVKEIRLRLNTGEHDLITKLNKAKKFLEDGNKIKFTIMFRGREIARKDAAMQMLENVADSFNEISEIDKKASLE 159
BLAST of mRNA_E-siliculosus-1a_F_contig1028.238.1 vs. uniprot
Match:
A0A2E5U511_9BACT (Translation initiation factor IF-3 n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E5U511_9BACT)
HSP 1 Score: 72.0 bits (175), Expect = 6.580e-11
Identity = 54/149 (36.24%), Postives = 80/149 (53.69%), Query Frame = 1
Query: 502 KAGGQTLTNKKIKAEKILLVLETEDGSKEATTVSRQQALAAANAVNLDLVQVSSGKNDQVVCRLMDFKKEEYRKQKQKKANAKR--IQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVL----------EANISLLKRSGNCL 912
K + L N +IKA K+ L+ ++ K VS QAL AN +LDLVQ++ G D VVC+++++ K Y K+KQKK N K+ + KEIR + DHD K+ +K+L GD +K+ + E+ LL+R N L
Sbjct: 3 KKNSEPLINSQIKASKVRLI---DENGKSCGLVSINQALDMANEASLDLVQIA-GNIDPVVCKILNYGKYRYDKEKQKKINKKKQHVIHVKEIRFRPNVGDHDLVIKLKKAEKFLLNGDKLKITVMFRGREFSRQESGYELLERIKNIL 147
BLAST of mRNA_E-siliculosus-1a_F_contig1028.238.1 vs. uniprot
Match:
UPI001F3D0553 (translation initiation factor IF-3 n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI001F3D0553)
HSP 1 Score: 71.2 bits (173), Expect = 1.010e-10
Identity = 54/144 (37.50%), Postives = 81/144 (56.25%), Query Frame = 1
Query: 526 NKKIKAEKILLVLETEDGSKEATTVSRQQALAAANAVNLDLVQVSSGKNDQVVCRLMDFKKEEYRKQKQKKANAK--RIQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVLE---ANISLLKRSGNCLNVLQEKFEEQ 942
N+ I A+ +LL+L DG K T V +AL AA A LDLV+V+ G VC+++D+ K + QK+K AN K R Q KEI++ I HD+G K ++K+ +RGD VKV + ++ + R L ++E F E+
Sbjct: 2 NRDITADNVLLILA--DGEKRGT-VPLSEALEAARAAGLDLVEVAPGLTP--VCKVLDYGKMRFENQKKKAANRKNQRTQALKEIKMRPNIDVHDYGVKTKAMQKFFDRGDKVKVTVRFRGREMAHMDRGMTLLARVKEDFAEE 140
BLAST of mRNA_E-siliculosus-1a_F_contig1028.238.1 vs. uniprot
Match:
A0A1V4I734_9FIRM (Translation initiation factor IF-3 n=1 Tax=[Clostridium] thermoalcaliphilum TaxID=29349 RepID=A0A1V4I734_9FIRM)
HSP 1 Score: 69.3 bits (168), Expect = 7.790e-10
Identity = 46/117 (39.32%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 526 NKKIKAEKILLVLETEDGSKEATTVSRQQALAAANAVNLDLVQVSSGKNDQVVCRLMDFKKEEYRKQKQKKANAKR--IQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVL 870
N++I+ ++I ++L DG ++ +S ++A A NLDLV++S N V C++MDF K +Y + K++K + K+ + KEIRL +I +HD K N KK+LE+GD VKVV+
Sbjct: 24 NEQIRDKEIRVIL---DGGEQLGIMSAKEAQLIATQKNLDLVKISPNANPPV-CKIMDFGKYKYEQSKKEKXSKKKQKVINVKEIRLRPVIEEHDLTTKGNQAKKFLEKGDKVKVVV 136
BLAST of mRNA_E-siliculosus-1a_F_contig1028.238.1 vs. uniprot
Match:
A0A2E1ZRP2_9BACT (Translation initiation factor IF-3 n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E1ZRP2_9BACT)
HSP 1 Score: 68.2 bits (165), Expect = 1.390e-9
Identity = 56/148 (37.84%), Postives = 81/148 (54.73%), Query Frame = 1
Query: 517 TLTNKKIKAEKILLV--LETEDGSKEATTVSRQQALAAANAVNLDLVQVSSGKNDQVVCRLMDFKKEEYRKQKQKKANAKR--IQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVLE---ANISLLKRSGNCLNVLQEKFEE 939
TL N I+AEK++L+ L T+ G + AL+ A +LDLVQ+S GK D +C+++DF K Y+KQK+ K N K I KEIRL +HD K+N KK+LE G+ +K + IS + + L+ + E F E
Sbjct: 7 TLINGSIRAEKVMLIDHLGTQKG-----VMPLSSALSIARENDLDLVQISDGK-DYPICKILDFGKYLYQKQKKLKQNKKNQHIIHVKEIRLRLSTGEHDLITKLNKAKKFLEEGNKIKFSIMFRGREISRKETAVKMLDGVAESFSE 148
BLAST of mRNA_E-siliculosus-1a_F_contig1028.238.1 vs. uniprot
Match:
A0A7C4YAJ9_9HYPH (Translation initiation factor IF-3 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4YAJ9_9HYPH)
HSP 1 Score: 67.4 bits (163), Expect = 2.920e-9
Identity = 47/118 (39.83%), Postives = 72/118 (61.02%), Query Frame = 1
Query: 526 NKKIKAEKILLVLETEDGSKEATTVSRQQALAAANAVNLDLVQVSSGKNDQVVCRLMDFKKEEYRKQKQKKANAKRIQKK---KEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVL 870
N+ I+ ++ L+ ++ K V R +ALA A AV LDLV+VS N V C+++D+ K +Y++QK K A A++ QK KEI++ I DHD+ K+ +K++ E GD VKV L
Sbjct: 16 NEAIRVREVRLI---DENGKNVGIVDRLEALARAEAVGLDLVEVSPDANPPV-CKILDYGKYKYQEQK-KAAEARKKQKIVEIKEIKMRPNIDDHDYDVKMRSIKRFFEEGDKVKVTL 128
BLAST of mRNA_E-siliculosus-1a_F_contig1028.238.1 vs. uniprot
Match:
W4QQA0_ALKA3 (Translation initiation factor IF-3 n=11 Tax=Bacillaceae TaxID=186817 RepID=W4QQA0_ALKA3)
HSP 1 Score: 66.6 bits (161), Expect = 4.440e-9
Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 1
Query: 520 LTNKKIKAEKILLVLETEDGSKEATTVSRQQALAAANAVNLDLVQVSSGKNDQVVCRLMDFKKEEYRKQKQKKANAK--RIQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVVLEANISLLKRSGNCLNVLQEKFEEQMED 951
L N+ I+A ++ L+ D + S+Q+AL A VNLDLV V+ V CR+MD+ K Y +QK++K K +I KE+RL I D+DF K+ + +K+LE+GD VKV + + S VL E+ ++ ED
Sbjct: 2 LVNEGIRAREVRLIGANGD---QVGVKSKQEALEMAQNVNLDLVCVAPTAKPPV-CRIMDYGKFRYEQQKKEKEARKNQKIINVKEVRLSPTIEDNDFNTKLRNARKFLEKGDKVKVAIRFRGRAITHSQIGRKVL-ERLAKECED 142
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1028.238.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 0.00e+0 / Id = 85.54 Expect = 6.09e-46 / Id = 94.57 Expect = 5.06e-11 / Id = 38.13 Expect = 6.43e-11 / Id = 36.54 Expect = 6.58e-11 / Id = 36.24 Expect = 1.01e-10 / Id = 37.50 Expect = 7.79e-10 / Id = 39.32 Expect = 1.39e-9 / Id = 37.84 Expect = 2.92e-9 / Id = 39.83 Expect = 4.44e-9 / Id = 36.30 Sequence A0A6H5K6J9_9PHAE D7FJ50_ECTSI A0A2E1MXZ1_9BACT A0A2E2A1M5_9BACT A0A2E5U511_9BACT UPI001F3D0553 A0A1V4I734_9FIRM A0A2E1ZRP2_9BACT A0A7C4YAJ9_9HYPH W4QQA0_ALKA3 Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 2277 Model size 2277 Exons 6 Ec32 ortholog Ec-10_000130.1 Ec32 ortholog description Translation initiation factor 3, N-terminal Hectar predicted targeting category other localisation BRITE ko00000,ko03012,ko03029 Best eggNOG OG NA|NA|NA Best tax level Sporolactobacillaceae COG Functional cat. J EggNOG OGs 1V1RC@1239,26NPQ@186821,4HFUS@91061,COG0290@1,COG0290@2 EggNOG free text desc. IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins GOs GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 KEGG ko ko:K02520 Preferred name infC Seed eggNOG ortholog 1395513.P343_01945 Seed ortholog evalue 6.6e-09 Seed ortholog score 69.7 Taxonomic scope Bacteria
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1028.238.1
>prot_E-siliculosus-1a_F_contig1028.238.1 ID=prot_E-siliculosus-1a_F_contig1028.238.1|Name=mRNA_E-siliculosus-1a_F_contig1028.238.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=759bp
MHDAAQQAGHGSIAVLVLPALCRVVHRQAMASRFLRADLRRACRPPSRPT back to top mRNA from alignment at E-siliculosus-1a_F_contig1028:1313..7663+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1028.238.1 ID=mRNA_E-siliculosus-1a_F_contig1028.238.1|Name=mRNA_E-siliculosus-1a_F_contig1028.238.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6351bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1028:1313..7663+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)ATGCATGATGCAGCACAACAAGCTGGACACGGGAGCATAGCTGTGCTCGT
GCTACCAGCCCTCTGCCGAGTGGTACATCGACAGGCAATGGCATCAAGGT
TCCTTCGAGCCGATCTGCGGCGCGCTTGCAGGCCTCCTTCCAGGCCTACG
AGCAGCAACAGCAATGCCTTCCTCTCTTTGGCCACGACCCGGCGAGATGA
ACCCTCGGTGGCACGTTCGGCATACAATCCGTCCGCATTGACAGCAGCAG
CTCTTGCTTCGCCGGAGTTGCTTTGTTCCAGCGTCCAGTCCTCTGGCCAT
GCACACAGCGAGTCGGCAACTGCGCGTAGCGGTAGTGGCGAGCACGGTCC
CCGGCTTCCGTTACCTGTCACCGGGATGGTTCCGGCCTTGACATCAGCCG
AGCAGCGCTACGTCGGTTGCTGGAGAGGGGCGGTAGGGTTAGGGTTGTGC
TCAAGACAGCAGCAACAGGCAGGGAGACGGTTCCTCAGCAGTCGCAGCGC
CAAAGCCGGTGGCCAGAC GTGAGTATGATTGATGCTTTGCATAGCCCGAG
TGCCTACGTACGTACATTTGCACGCGACAAGGATCGAATACGAAGTACCA
AAGGTGCTTTCTACAGGTCGACGCTCTGCCTTCTTTTTCTCTCTTGGTCA
GTGTGGTCTACCCCTTGCTTGAGCTGATTGCTTTGCCTGTACAACCTCAA
GGGCTTGAGCTGCTTGCTAATAAGCTGTTGCCTGGAGTGCTTGAACACAA
ACCGGGCCGCCGATACCGCGTGGCATAGGACTTTTGGCAACTCTGTCGGC
TGTGCCTGGATAGGAACTGCGGTTGCATAGGCCAACACAATCTATCCTGC
ACGCAACGCGTGCTTCGTTGCACCAAATGCGGCGAAATTACTTCCCGAAC
CTGCTGTGTTCACGACCCTCCGGATTTGGGGCGCACACGAAGCATGGACC
GTGAGTAGCACATGTAGCATCCAGCATTTTTTTTTGTGAGACCCTTGTGT
TTCGACTTGTTCGTATTGCTGATTTCCAGCAAGAACCACGCACACCACGC
AGTACAACCTCGACTGTTCAGCGCTGAAGTGGTGTAGGGTGACGTTCGAA
ACTCGTACCCACTGGGCGCTGCGCACGTCCTTACCTTCTGATGTTTTGAC
CTCCTATTCTCCCGCACCCATGGTACTTGGACCTTTTGCATCTTACATTA
AGTTGTTATCTTGGTGAAAGGGAAACCGCTTCGGTATGTAGGAATCATCG
TGGCGTTGCCCAATTTCGGGTTAGGGCATCAGCCTGAAGAACAGCAGTAA
AACGCTTCGAGTACCATACAAAACAATGACCGTGTTCTTAGGCCAGTTGT
TATGGAAAGAATTCCCAACTGGGAATCCCGATATTACGCCTTTTACATCC
AAACCCCCATGCGCCAGCAGGAGTTCTACGCACTTGGTGGGAAAAGCACA
CCAAAGCGCTTTGTCAATCAGTACGCGCCTCACAGAAATCCGTTTGCGAT
CAAACCTTCGAGGCTGTAGACTACATTGCTGTGAGCCTCTCGGAGCCAAG
TTTGGGGAGCTGGGGTGGAGTGTGTGTTCATCATGCTTGGAAAAATAGGA
TTCCAATCTGGGAATATTTGGACGATCCTGCGTGGGAATTCCTCATGAAT
TCCAAACTGGAATTGGTTGAAATCCCAATCTGGGAATTACGAATTTGCTT
TCATATCCGAGGCTACTCTGTGCACACTCCATTCTAGCGGCCCAAACTTG
GCTCCGCAAAGCTCACAGCAGTGGACTGTACAGCCTCGGTGGTTTGATAA
GGAACAGGTCTCTGTGAGGCAAGGACTAAGTAACGAAGTGCCGTGGTGGG
CTCTGCTTGCTATCCAGTACGCAGACCTCCTCTTTTGGGGGGATGGCTAA
CCATTTTCTGTCGACCCCCCGGATTCCTATCTGGGAAAATCTACCGTAAC
AACTGGCCTTAACACGTGTCCGCGGTGCTGCAATAGGCTTACGAACAAGA
AGATCAAGGCCGAGAAGATTCTGCTGGTGTTGGAAACAGAAGACGGGTCC
AAGGAGGCCACCACGGTCTCTCGGCAGCAGGCGCTCGCCGCCGCCAATGC
TGTAAACCTCGATCTGGTGCAGG GTGAGCAGGGAGACCCGGATACTTTCA
CATCTGACGTGTGGTTGATGTTGACAACAACTCGCTTCGAGAGGCATATT
TGTTCGCTTCTTCTTTTTTGTCTACAAGAAGAAAACGAATTAATGTTTTA
TCAGCAAGAGTCCAGATCAATTTGCGCGAATGTTGAAGGTTTAAGGTAAG
TATTATGCGGTGTGGTGCAGGCTAGCCATGGTTTGAAGCAGGCAAATGTG
TCGCTGCGGCAGAGGGATAATCTTGATCGCGTGCATGTTGCTGTGCGGAG
CTTGAGAGCGAGACGCAGCAGCAGTGCTGTTGTTGTATGGTCGAAACAAG
ACAAGACAAAAATTGGCGTTCCTTCATCTACAAGCATCTTCGTGTTAGCA
TTCCCAAGAGGGACGAAGCAACATGTTGAGCACGTTCACCTCCCTCCGCT
CGACCCTTCCACGCCCCCAAGTTGACAATCATTTTTTGTCTCCGTGTATC
CCCAACGCCTTACTTCGCACATCTCTCACCTGCTTGGCCTCCATGTTTGT
TCCCTTCGCGTATTCCTCCACGTCGGATGATTGACGTGGCCGGCCGCTGG
TCGGTACAACGCTAACAAAACAAATAAAAGTGAGTAGCGGTAAGAACGAC
CAGGTGGTATGCAGGCTCATGGACTTCAAGAAGGAGGAGTACCGGAAGCA
GAAGCAAAAAAAAGCCAACGCGAAAAGGATCCAGAAGAAGAAGGAGATAC
GATTGGGG GTGCGTGCCGTGGCTGGCGTGTTGTTTTATGCATATAGGGTC
AACTCCTGTGGTCTCATTTCGCAGTGTGATTTTGTGCTTGCTGTCTGTCC
TTCTATTCCCCGCCGTTTGCAGTATGCTCCGTGCTCAATTATCACCCGTA
CATCCACAAGGAATTCCCAAGAGGCAAACTATGTGCAGTACTTAGTCCTC
TGTACCCCTAGCTTTCTTAGGCAACAAGAAGGGGAAAGCGTCGGTGGGGA
TCACCTCGCTACTGCTTGTATGTGTGGCTCAGCTTACTCTAAGATGCCAC
AACTTTGTTCGCTCCAACTATCTTTCAAGTTGGTCACATAATATTGCCTA
GTTACACTGCTATCCAACGTGTTCATGTCGAGTTCTTGATTATTGGCGTC
CTCACCTGTCTTCGAGAACCCAGTTCGGTTTCGTGTATCTCGCCGAAAAA
CAGAAACAATGGCCAAGCTGCAGTAAGTCATCACAACACGCCGAGTATCG
TGAACACTGCCCACCGGCAAACTCTGTTCTAGCGCACACCCTTTTTCCCG
TTCTGGAATCCAAACTCGTCTAGGTATAGCGGCTCCTTCTTCCTTGCTTG
TCTTGATAGGGTCTTTTGTTTAGCCGCTCGCAACGCAGCACGAATATTGG
TCCTTCGTACATGTGGTTACTGCCGCACCGCCTCCAATTTTCTTTCCAGG
GCATGATCGCGGACCACGACTTTGGCAGGAAAGTGAACGATGTCAAGAAG
TATTTGGAGAGGGGGGACGTCGTCAAG GTAAGAACCCAAACGCTTAGGCT
GGTGCAAGCTGCTGAAGAAGTGCAGGCAATATGACATTGTGTCCCGTGTT
CAATGTGCTCCTTTCGCGGGTATGTTCCCGCCATGTCTCGAGTTTGTGTT
TTCACTCTCTTCCTCACTTATTGTTGCGTGGGTTCTTCTCTCGACTTGCA
TCATGCAAACAACATAACCACGGCAGGTGGTATTGGAGGCGAACATATCG
CTACTCAAGCGGTCCGGGAACTGCTTGAACGTCTTGCAGGAGAAATTCGA
GGAGCAAATGGAAGACTACGAAGGG GTGCGTATGTCCTTTATTTTCTTCT
TTACTGTTGGTTTCATTGATGCGGTATGACAAGACAACTCCCTCGGTCCC
AGCCGAACCCACGATGCTGCCGATCAATCGAAAAACGCAGGCGGCACGTC
CATACCCACCAGAAAGAAAGCAAGTAACGCGCAAACGTTTGAGATGCGGA
GAATGGTCTGTTGTTGCCCTCGAGGGTACCGTTGCTGCGAACGTCGTGGG
ATTTAGAACCTCGGCCACCTGGCTCGAGAAACATAGCTTGAGTTTCCATA
ACAGAACCAGAAACGTTCTAGCTCATTTCTCTGACCTATGTCCTCAACAC
CGCCTCCCTCCGCCGGGCGAGGGTTGATAACTTTTTGTTGTGCTGGCGAA
GGAAGCCTTGCTTCCAACTTGCAGCTCAACAACGTTTTAGAACCCGCAAC
GACCGAATCCCTGCAAAACGCGACACTGCGTCGGGGCTTCCATGTCGCTT
ATGGGGGCGTTCCACCGGTTGTATGTCGAGCGCATTCGATCACGAATTGT
GGAACGGCACACAATGCCACCAAGTGGATATTTGGCTTGTAGTTGAATTT
GGTTCTGCCACCTTCATGCTGTTGAAATTGCTTTGCTTGTCGTACACCCA
ACCGCCCGTGTTATAAAACGACAGAGAGTTCCGAGCTTTCCTGACAAACG
AGTCGTTCATGCCGACATTGGTTGACGAACGGTTCGAAGACGCTAGCGAA
GCTTGATTCCGGGGGTCTTGTGTGTTTTCCGACTAGTTATGGAACGCGCG
TTTCAGGTTGTGCCATCTTGCTCAATTAGGAAGAAAATGTCAATCGTTGT
CTGCAACGAAATTAATCGGATCTTTCCCTACCGACTGCCGCTCATCCCTT
AAGAAAGAGGAGATGGTTAACGGAAATGGTTAACGAATAACCTACCATAG
CATGAGGCTCGTATTGCTTTCGCAGAGCATTTTGTAGTGCACTCGCCTCT
CGCCCTCTTGTCGCAAGAAGCGCTTTTGGCCTGCCCAACTCGACTCCGCG
TTACGTACTTCTGTCATGCCGCGAGCCGTATGGATTCATTTCACTGCGAA
CTTCATGGATTAATCTCCCTCGGTTCCTTTGTAGGCTGTGCTGAAGCACT
CTGGAGGGGGGAACGGGTACACCCGGCGGGAAATCGAATGCATTCCGAAA
ACCGTCAGGCCGACCACCGCAAAGCCGACAACGTCGGCCTCTGAGACGCC
GGGGAGATATGGTGGCGGTACTCCTGAGGCTGGGGAGAAGGAGAACCCCA
ACCCCCCGCCGCCGCGTAGCGTGGTGGTCGACAAACATGTCGTGCGCGAA
ATTCTCAGCGGAGCAGCAGAAACAGCGCAAGGAGGGAGTGAAGGAGAGCT
ATCTTCTTCGAACTCTGGTGGTAACGCCGCTGGTGAATCCGTTGACAGTT
CTTCGGAAGAGGAATCAGGAGAAGATTCCTCGTCAGACGAAGAGGATGTG
GCTGAAACAGCGTCGCCGTTGAAGTTGGGAAGCACTGAGATCTCGTTGAA
TGATGTGGAGCTGTACGACGATCTCGTGGATGAGACCGTCTACGACGACG
GCGACCTTGAGAGAGAAAGAAACGAGGCCCGAAGACGCGAAGACCGGCGG
AAGCGGGAAGAAGCTAAGGAAAAGGTTAGAAATGCGGCCCGCTACGCTCC
CACGCGCGGTGGCGGCGGAGGCGGTGGACGCAAAAAGTGGAAGGCTGAGA
TTGACCGCGAGGGCGGTGGGGGCGGCGACAATTTTGATGAGGAATCTGGG
TGGGGTGAAAAGGATGACAGACGGACAGCACGCCGGGCGCCCAAGGGGAG
AGATCAGCAAGACGCCGGAAGGAGGGGCGTCGTGGGTGGGGACAGTAGAG
CGGGTGCCAGCGGCAGGGGAGGTAGTCCGAAGGTGTGGTCAACAGGCGGC
GGTCGTCGAGATGGCTCCCTTCCAAACGTGCCACAGCAGGGGGCGGGCAG
CTTTAGACGAGGGGGTCGAAGGGGCAGCGATGGCGGCAGTGGTCCACGTG
AGGGGCCTCCTCCGCCTTCACCAGCACGTGCAGCCCGCGCACCGTACAAG
TGGCGGACTTCAATTGCCGATGCAAAGGTGGCGGAGGCAGGCGAGGACAG
AGAAGGGGCATCCGCGAAGCCCTGGTACAGTAGGTCTAGCAGTGCCGCGT
CACTGGCACGGGTGGCACGCACGAAGGATGGCAGCGGGGCTACTGGAGCC
GAGGAGGTTAGGGGGTTTAAGGCTAGGTTCGGCGGAGGATCCATGAATCT
GGCGCCTACAAACCCAGCTCCTGCTGGTACTGCCAAGGCAACATCCAGCA
AAGGGTTTCGCAGTTCGTCTGTGACTGCACCTTCTGCGAAGGTGAAACCG
CCAAGGGCATCTGAAAAAGGCTCGGACCGAGGGGTCGGCGGCCAGGAATG
A back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1028:1313..7663+
>mRNA_E-siliculosus-1a_F_contig1028.238.1 ID=mRNA_E-siliculosus-1a_F_contig1028.238.1|Name=mRNA_E-siliculosus-1a_F_contig1028.238.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4554bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1028:1313..7663+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top