prot_E-siliculosus-1a_F_contig1400.2375.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1400.2375.1
Unique Nameprot_E-siliculosus-1a_F_contig1400.2375.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length888
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A6H5JD86_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JD86_9PHAE)

HSP 1 Score: 1129 bits (2919), Expect = 0.000e+0
Identity = 780/890 (87.64%), Postives = 794/890 (89.21%), Query Frame = 0
Query:    1 LQGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDGTGDEEKDAEEKKQDEEVHEWTYEGEIGEQTQPPEVLAARREAARRAARDGGMIGLPAXXXXXXXXADNFPTLSGXXXXXXXXXXXXRXXXXSRTGWAGLASSTRPRAXXXXXXXXXXXXXXXXXXX---STFRSAVEAYPTRAQEIAMSGAGEGGWCFDYPMPPSEPTGGXXXXXXXRGRVAGIGNMKLKVDKKAAKRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAEAVVVEDFPLAPGMRAPPPSAQAGPIAATNSSGPTLAQSIAARQQPQXXXXXXXXXXXXXSVVMELKELLGEEVFAEVKEISASYRSGWMMPGEYFKAMEERLPEERFGELFEGLIGTLPDQDKRREMQVLLAASRSVKAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAAGAESWPEVGENASSAGAAGGKAKTRGKQAKSNGAASNGRXXXXXXXXXXXXXXXXXXXXXSKTSPSTVAGAKTPGSAATWLKAMGTKTGGGAKTGGTGISIVRPSARAGXXXXXXXXXTAPNASSTITAVAGGYSGSRLQCNPGVRARPESPPPGAPLRRRDEEELVGGIGQAGASWATQGGSGFKGASKAEAAPAAAKTKISRDDFPGLPGGGGGAAAMRANXXXXXXXXEEGAGMRGLGGAATATAFKVKPRAKAPPPAPQQRPPTGDDFPGLPMPVSSSVMPGMEKVDWGGSAHSGGSQRGGXXXXXXXXXXXXXXXXQKMEKDALKGMAFGFR 887
            + GDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQGILHKYYRDYTDLERHFR+EHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHP+KPIKRQIQVNFKVKRSNWDGTGDE+KDAEEKKQDEE+HEWTYEGEIGEQTQPPEVLAARREAARRAARDGGMIGLPAXXXXXXXX D+FPTLSGXXXXXXXX         SRT WAGLASSTRPRAXXXXXXXXXXXXXX        STFRSAVEAYPTRAQEIAMSGAGEGGWCFDYPMPPSEPTGGXXXXX  RGRVAGIGNMKLKVDKKAAKRSKXXXXXXXXXXXXXXXXXXXXXXXXXXX                            AEA  VVVEDFPLAPGMRAP P AQA PIAA NSSGPTLAQSIAARQQPQXXXXXXXXXXXXXSVVMELKELLGEEVFA+VKEISASYRSGWMMPGEYFKAMEERLPEERFGELFEGLIGTLPDQDKRREMQVLLAASRSVKAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AAG+ESWPEVG NASSAGAAGGKAKTRGKQAKSNGAASNGRXXXXXXXXXXXX         SKTSPSTVAGAKTPGSAATWLKAMGTKTGGGAKTGGTGISIVRPSARA           APNASSTIT+ AGGYSGSRLQCNPGVRARPESPPPGAPLRRRD+EEL+GGIGQAGASWATQGGSGFKGASKA AAPA A+T ISRDDFPGLPGGGGGAAA+RAN  XXXXXX   AGMRGLGGAATATAFKVKPRAKAP    QQRPPTGDDFPGLPMP SSSVMPGMEKVDWGGSAHSGGSQR  XXXXXXXXXXXXXXX QKMEKDAL+GMAFGFR
Sbjct:  172 VSGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQGILHKYYRDYTDLERHFRSEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPNKPIKRQIQVNFKVKRSNWDGTGDEQKDAEEKKQDEELHEWTYEGEIGEQTQPPEVLAARREAARRAARDGGMIGLPAXXXXXXXXXDDFPTLSGXXXXXXXX---------SRTCWAGLASSTRPRAXXXXXXXXXXXXXXMGGGVGGGSTFRSAVEAYPTRAQEIAMSGAGEGGWCFDYPMPPSEPTGGXXXXX--RGRVAGIGNMKLKVDKKAAKRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPPASPAFHHPARSPVTPSPPA-----AEAVEVVVEDFPLAPGMRAPHPPAQASPIAAANSSGPTLAQSIAARQQPQXXXXXXXXXXXXXSVVMELKELLGEEVFADVKEISASYRSGWMMPGEYFKAMEERLPEERFGELFEGLIGTLPDQDKRREMQVLLAASRSVKAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSESWPEVGGNASSAGAAGGKAKTRGKQAKSNGAASNGRXXXXXXXXXXXXK--------SKTSPSTVAGAKTPGSAATWLKAMGTKTGGGAKTGGTGISIVRPSARASAGSGNP----APNASSTITSAAGGYSGSRLQCNPGVRARPESPPPGAPLRRRDDEELIGGIGQAGASWATQGGSGFKGASKAAAAPAPARTNISRDDFPGLPGGGGGAAALRANRAXXXXXXXXXAGMRGLGGAATATAFKVKPRAKAPXXXXQQRPPTGDDFPGLPMPASSSVMPGMEKVDWGGSAHSGGSQRXXXXXXXXXXXXXXXXXKQKMEKDALQGMAFGFR 1033          
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A8K1FHA1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHA1_PYTOL)

HSP 1 Score: 152 bits (385), Expect = 5.030e-34
Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 0
Query:    2 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEK-QGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDGT 119
            +G+P+ G  GHPRC+FC TRFY   +L DHL K+HY C IC + QG+ ++YY+DY DLE HFRAEHFLCEE ECL KKFVVF + ID  GH    HPH  I R+I V+F V+R+  DGT
Sbjct:  861 KGNPKEGFMGHPRCDFCFTRFYSNTELFDHLHKNHYECDICVRSQGVQNRYYKDYHDLENHFRAEHFLCEEPECLMKKFVVFKTHIDFQGHMTTEHPHIKISRKIDVHFTVRRATNDGT 979          
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: K3W8I5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8I5_GLOUD)

HSP 1 Score: 144 bits (362), Expect = 1.190e-31
Identity = 64/120 (53.33%), Postives = 85/120 (70.83%), Query Frame = 0
Query:    2 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHIC-EKQGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDGTG 120
            +G+ + G +GHPRC+FC +RFY   +L+DHL K+H+ C IC     I ++YY+DY DLE HFRAEHFLCEE  CL+KKFVVF S +DL  H  + HPH  + R+I V+F V+R+  DG G
Sbjct:  169 KGNLKEGFSGHPRCDFCFSRFYSTTELYDHLHKNHFECDICLHSMNIQNRYYKDYNDLENHFRAEHFLCEEPICLRKKFVVFKSHLDLQAHMTKEHPHIKVSRKIDVHFTVRRATHDGAG 288          
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: H3GSX0_PHYRM (C2H2-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSX0_PHYRM)

HSP 1 Score: 140 bits (352), Expect = 1.850e-30
Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 0
Query:    2 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQ-GILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSN 115
            +G+P  G  GHPRC+FC +RFY   +L+DHL K+H+ C IC  Q  + ++YY+DY DLE HFRA+HFLCEE ECL KKFVVF S +DL GH    HPH    R+I V+F V+R++
Sbjct:  163 KGNPHEGFMGHPRCDFCFSRFYSTTELYDHLRKNHFECDICLYQLHVQNRYYKDYNDLENHFRADHFLCEERECLAKKFVVFKSHLDLQGHLAVDHPHIKSSRKIDVHFTVRRAS 277          
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: D0NB79_PHYIT (C2H2-type domain-containing protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NB79_PHYIT)

HSP 1 Score: 140 bits (352), Expect = 1.860e-30
Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 0
Query:    2 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQ-GILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDGTGDEE 123
            +G+P  G  GHPRC+FC +RFY   +L+DHL K+H+ C IC  Q  + ++YY+DY DLE HFRA+HFLCEE ECL KKFVVF S +DL  H    HPH    R+I V+F V+R++    GDEE
Sbjct:  164 KGNPHEGFMGHPRCDFCFSRFYSTTELYDHLRKNHFECDICLYQLNVQNRYYKDYNDLENHFRADHFLCEERECLAKKFVVFKSHLDLQAHLTVDHPHIKTSRKIDVHFTVRRASQ---GDEE 283          
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A662WQ67_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQ67_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.890e-30
Identity = 64/117 (54.70%), Postives = 83/117 (70.94%), Query Frame = 0
Query:    2 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHIC-EKQGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWD 117
            +G+P+ G  GHPRC+FC +RFY  A+L+DHL K+H+ C IC     I ++YY+DY DLE HFRAEHFLCEE  CL KKFVVF S IDL GH    HP+    R+I V+F ++R++ D
Sbjct:  250 KGNPREGFMGHPRCDFCFSRFYSTAELYDHLHKNHFECDICLHAMHIQNRYYKDYHDLENHFRAEHFLCEEASCLAKKFVVFKSHIDLQGHLAVEHPYIKTSRKIDVHFTIRRASQD 366          
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A6G0XFY2_9STRA (RING-type domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFY2_9STRA)

HSP 1 Score: 139 bits (351), Expect = 2.740e-30
Identity = 60/118 (50.85%), Postives = 84/118 (71.19%), Query Frame = 0
Query:    2 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHIC-EKQGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDG 118
            QG+P+ G  GHP+C+FC+ RFY   +LH+HL K+H+ C IC    GI ++YY+DY D+E HFR+EHFLCEE ECL  KFVVF + I+   H  + HPH  + R+I V+F ++R++ DG
Sbjct:  173 QGNPEEGFNGHPKCDFCQNRFYGNNELHEHLRKNHFECEICLHAYGIENRYYKDYHDMENHFRSEHFLCEEPECLAAKFVVFKNHIEFQAHLTRNHPHVRVCRKIDVHFSIRRADNDG 290          
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A2D4C461_PYTIN (RING-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C461_PYTIN)

HSP 1 Score: 140 bits (352), Expect = 4.600e-30
Identity = 63/114 (55.26%), Postives = 80/114 (70.18%), Query Frame = 0
Query:    2 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQ-GILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRS 114
            +G+P+ G  GHPRC+FC +RFY   +L DHL K+H+ C IC +  G+ ++YY+DY DLE HFRAEHFLCEE  CL KKFVVF S ID   H    HPH  I R+I V+F V+R+
Sbjct:  869 KGNPREGFAGHPRCDFCFSRFYSNTELFDHLHKNHFECDICVRSLGVQNRYYKDYPDLENHFRAEHFLCEEPSCLAKKFVVFKSHIDFQAHMATEHPHIKISRKIDVHFTVRRA 982          
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A024UQB2_9STRA (RING-type domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQB2_9STRA)

HSP 1 Score: 139 bits (349), Expect = 4.740e-30
Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 0
Query:    2 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHIC-EKQGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDG 118
            QG+P+ G  GHP+C+FC + +Y   +LH+HL K HY C IC    GI ++YY+DY D+E HFR++HFLCEE  CL  KFVVF + I+   H  + HPH P+ ++I VNF V+R++ +G
Sbjct:  173 QGNPEEGFNGHPKCDFCSSSYYGNNELHEHLRKHHYECEICLHAYGIENRYYKDYNDMENHFRSDHFLCEEPSCLAAKFVVFKNHIEFQAHMTKNHPHIPVSKRIDVNFSVRRADREG 290          
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A6A3RRL2_9STRA (C2H2-type domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RRL2_9STRA)

HSP 1 Score: 138 bits (347), Expect = 7.800e-30
Identity = 62/114 (54.39%), Postives = 80/114 (70.18%), Query Frame = 0
Query:    3 GDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQ-GILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSN 115
            G P  G  GHPRC+FC +RFY   +L+DHL K+H+ C IC  Q  + ++YY+DY DL+ HFRA+HFLCEE ECL KKFVVF S +DL GH    HPH    R+I V+F V+R++
Sbjct:  165 GKPHEGFMGHPRCDFCFSRFYSTTELYDHLRKNHFECDICLYQLHVQNRYYKDYNDLQNHFRADHFLCEERECLAKKFVVFKSHLDLQGHLAVDHPHIKTSRKIDVHFTVRRAS 278          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD86_9PHAE0.000e+087.64RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A8K1FHA1_PYTOL5.030e-3458.82Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3W8I5_GLOUD1.190e-3153.33Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GSX0_PHYRM1.850e-3054.78C2H2-type domain-containing protein n=1 Tax=Phytop... [more]
D0NB79_PHYIT1.860e-3053.66C2H2-type domain-containing protein n=3 Tax=Phytop... [more]
A0A662WQ67_9STRA1.890e-3054.70Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A6G0XFY2_9STRA2.740e-3050.85RING-type domain-containing protein n=2 Tax=Aphano... [more]
A0A2D4C461_PYTIN4.600e-3055.26RING-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A024UQB2_9STRA4.740e-3049.15RING-type domain-containing protein n=2 Tax=Aphano... [more]
A0A6A3RRL2_9STRA7.800e-3054.39C2H2-type domain-containing protein n=6 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 37..66
e-value: 8.5
score: 13.9
coord: 67..96
e-value: 130.0
score: 3.3
coord: 13..36
e-value: 4.7
score: 16.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 15..36
NoneNo IPR availablePANTHERPTHR22938:SF0E3 UBIQUITIN-PROTEIN LIGASE ZNF598coord: 7..532
NoneNo IPR availablePANTHERPTHR22938ZINC FINGER PROTEIN 598coord: 7..532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1400contigE-siliculosus-1a_F_contig1400:28323..32604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1400.2375.1mRNA_E-siliculosus-1a_F_contig1400.2375.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1400 28323..32604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1400.2375.1 ID=prot_E-siliculosus-1a_F_contig1400.2375.1|Name=mRNA_E-siliculosus-1a_F_contig1400.2375.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=888bp
LQGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQGILHK
YYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKP
IKRQIQVNFKVKRSNWDGTGDEEKDAEEKKQDEEVHEWTYEGEIGEQTQP
PEVLAARREAARRAARDGGMIGLPAPAPAPAAAADNFPTLSGGGGGGGGG
GGGSRGGGGSRTGWAGLASSTRPRAEDFPALGGRGRGGGGGGGGSTFRSA
VEAYPTRAQEIAMSGAGEGGWCFDYPMPPSEPTGGGGGGGGGRGRVAGIG
NMKLKVDKKAAKRSKQKAAAAAAAAAAAAAAAGKQQTAAKQQARGASPPP
ASAASHHPARSPSLPPPPPPAEAEAVVVEDFPLAPGMRAPPPSAQAGPIA
ATNSSGPTLAQSIAARQQPQPQQEQLGGGGGPPSVVMELKELLGEEVFAE
VKEISASYRSGWMMPGEYFKAMEERLPEERFGELFEGLIGTLPDQDKRRE
MQVLLAASRSVKAKAAAKKKPKKKPPSPAAAAPAAAPPPPTTTANGGTAA
GAESWPEVGENASSAGAAGGKAKTRGKQAKSNGAASNGRGKAGGGGGGGG
GGGGGGGGGKSKTSPSTVAGAKTPGSAATWLKAMGTKTGGGAKTGGTGIS
IVRPSARAGGGGGGGGGSTAPNASSTITAVAGGYSGSRLQCNPGVRARPE
SPPPGAPLRRRDEEELVGGIGQAGASWATQGGSGFKGASKAEAAPAAAKT
KISRDDFPGLPGGGGGAAAMRANRADFPSLPEEGAGMRGLGGAATATAFK
VKPRAKAPPPAPQQRPPTGDDFPGLPMPVSSSVMPGMEKVDWGGSAHSGG
SQRGGGAGAGGGGKGAKKKNKQKMEKDALKGMAFGFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type