mRNA_E-siliculosus-1a_F_contig1400.2375.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A6H5JD86_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JD86_9PHAE) HSP 1 Score: 1129 bits (2919), Expect = 0.000e+0 Identity = 780/890 (87.64%), Postives = 794/890 (89.21%), Query Frame = 1
Query: 1 LQGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDGTGDEEKDAEEKKQDEEVHEWTYEGEIGEQTQPPEVLAARREAARRAARDGGMIGLPAXXXXXXXXADNFPTLSGXXXXXXXXXXXXRXXXXSRTGWAGLASSTRPRAXXXXXXXXXXXXXXXXXXX---STFRSAVEAYPTRAQEIAMSGAGEGGWCFDYPMPPSEPTGGXXXXXXXRGRVAGIGNMKLKVDKKAAKRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAEAVVVEDFPLAPGMRAPPPSAQAGPIAATNSSGPTLAQSIAARQQPQXXXXXXXXXXXXXSVVMELKELLGEEVFAEVKEISASYRSGWMMPGEYFKAMEERLPEERFGELFEGLIGTLPDQDKRREMQVLLAASRSVKAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAAGAESWPEVGENASSAGAAGGKAKTRGKQAKSNGAASNGRXXXXXXXXXXXXXXXXXXXXXSKTSPSTVAGAKTPGSAATWLKAMGTKTGGGAKTGGTGISIVRPSARAGXXXXXXXXXTAPNASSTITAVAGGYSGSRLQCNPGVRARPESPPPGAPLRRRDEEELVGGIGQAGASWATQGGSGFKGASKAEAAPAAAKTKISRDDFPGLPGGGGGAAAMRANXXXXXXXXEEGAGMRGLGGAATATAFKVKPRAKAPPPAPQQRPPTGDDFPGLPMPVSSSVMPGMEKVDWGGSAHSGGSQRGGXXXXXXXXXXXXXXXXQKMEKDALKGMAFGFR 2661
+ GDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQGILHKYYRDYTDLERHFR+EHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHP+KPIKRQIQVNFKVKRSNWDGTGDE+KDAEEKKQDEE+HEWTYEGEIGEQTQPPEVLAARREAARRAARDGGMIGLPAXXXXXXXX D+FPTLSGXXXXXXXX SRT WAGLASSTRPRAXXXXXXXXXXXXXX STFRSAVEAYPTRAQEIAMSGAGEGGWCFDYPMPPSEPTGGXXXXX RGRVAGIGNMKLKVDKKAAKRSKXXXXXXXXXXXXXXXXXXXXXXXXXXX AEA VVVEDFPLAPGMRAP P AQA PIAA NSSGPTLAQSIAARQQPQXXXXXXXXXXXXXSVVMELKELLGEEVFA+VKEISASYRSGWMMPGEYFKAMEERLPEERFGELFEGLIGTLPDQDKRREMQVLLAASRSVKAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAG+ESWPEVG NASSAGAAGGKAKTRGKQAKSNGAASNGRXXXXXXXXXXXX SKTSPSTVAGAKTPGSAATWLKAMGTKTGGGAKTGGTGISIVRPSARA APNASSTIT+ AGGYSGSRLQCNPGVRARPESPPPGAPLRRRD+EEL+GGIGQAGASWATQGGSGFKGASKA AAPA A+T ISRDDFPGLPGGGGGAAA+RAN XXXXXX AGMRGLGGAATATAFKVKPRAKAP QQRPPTGDDFPGLPMP SSSVMPGMEKVDWGGSAHSGGSQR XXXXXXXXXXXXXXX QKMEKDAL+GMAFGFR
Sbjct: 172 VSGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQGILHKYYRDYTDLERHFRSEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPNKPIKRQIQVNFKVKRSNWDGTGDEQKDAEEKKQDEELHEWTYEGEIGEQTQPPEVLAARREAARRAARDGGMIGLPAXXXXXXXXXDDFPTLSGXXXXXXXX---------SRTCWAGLASSTRPRAXXXXXXXXXXXXXXMGGGVGGGSTFRSAVEAYPTRAQEIAMSGAGEGGWCFDYPMPPSEPTGGXXXXX--RGRVAGIGNMKLKVDKKAAKRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPPASPAFHHPARSPVTPSPPA-----AEAVEVVVEDFPLAPGMRAPHPPAQASPIAAANSSGPTLAQSIAARQQPQXXXXXXXXXXXXXSVVMELKELLGEEVFADVKEISASYRSGWMMPGEYFKAMEERLPEERFGELFEGLIGTLPDQDKRREMQVLLAASRSVKAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSESWPEVGGNASSAGAAGGKAKTRGKQAKSNGAASNGRXXXXXXXXXXXXK--------SKTSPSTVAGAKTPGSAATWLKAMGTKTGGGAKTGGTGISIVRPSARASAGSGNP----APNASSTITSAAGGYSGSRLQCNPGVRARPESPPPGAPLRRRDDEELIGGIGQAGASWATQGGSGFKGASKAAAAPAPARTNISRDDFPGLPGGGGGAAALRANRAXXXXXXXXXAGMRGLGGAATATAFKVKPRAKAPXXXXQQRPPTGDDFPGLPMPASSSVMPGMEKVDWGGSAHSGGSQRXXXXXXXXXXXXXXXXXKQKMEKDALQGMAFGFR 1033
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A8K1FHA1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHA1_PYTOL) HSP 1 Score: 152 bits (385), Expect = 5.030e-34 Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1
Query: 4 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEK-QGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDGT 357
+G+P+ G GHPRC+FC TRFY +L DHL K+HY C IC + QG+ ++YY+DY DLE HFRAEHFLCEE ECL KKFVVF + ID GH HPH I R+I V+F V+R+ DGT
Sbjct: 861 KGNPKEGFMGHPRCDFCFTRFYSNTELFDHLHKNHYECDICVRSQGVQNRYYKDYHDLENHFRAEHFLCEEPECLMKKFVVFKTHIDFQGHMTTEHPHIKISRKIDVHFTVRRATNDGT 979
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: K3W8I5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8I5_GLOUD) HSP 1 Score: 144 bits (362), Expect = 1.190e-31 Identity = 64/120 (53.33%), Postives = 85/120 (70.83%), Query Frame = 1
Query: 4 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHIC-EKQGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDGTG 360
+G+ + G +GHPRC+FC +RFY +L+DHL K+H+ C IC I ++YY+DY DLE HFRAEHFLCEE CL+KKFVVF S +DL H + HPH + R+I V+F V+R+ DG G
Sbjct: 169 KGNLKEGFSGHPRCDFCFSRFYSTTELYDHLHKNHFECDICLHSMNIQNRYYKDYNDLENHFRAEHFLCEEPICLRKKFVVFKSHLDLQAHMTKEHPHIKVSRKIDVHFTVRRATHDGAG 288
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: H3GSX0_PHYRM (C2H2-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSX0_PHYRM) HSP 1 Score: 140 bits (352), Expect = 1.850e-30 Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 1
Query: 4 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQ-GILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSN 345
+G+P G GHPRC+FC +RFY +L+DHL K+H+ C IC Q + ++YY+DY DLE HFRA+HFLCEE ECL KKFVVF S +DL GH HPH R+I V+F V+R++
Sbjct: 163 KGNPHEGFMGHPRCDFCFSRFYSTTELYDHLRKNHFECDICLYQLHVQNRYYKDYNDLENHFRADHFLCEERECLAKKFVVFKSHLDLQGHLAVDHPHIKSSRKIDVHFTVRRAS 277
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: D0NB79_PHYIT (C2H2-type domain-containing protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NB79_PHYIT) HSP 1 Score: 140 bits (352), Expect = 1.860e-30 Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 4 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQ-GILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDGTGDEE 369
+G+P G GHPRC+FC +RFY +L+DHL K+H+ C IC Q + ++YY+DY DLE HFRA+HFLCEE ECL KKFVVF S +DL H HPH R+I V+F V+R++ GDEE
Sbjct: 164 KGNPHEGFMGHPRCDFCFSRFYSTTELYDHLRKNHFECDICLYQLNVQNRYYKDYNDLENHFRADHFLCEERECLAKKFVVFKSHLDLQAHLTVDHPHIKTSRKIDVHFTVRRASQ---GDEE 283
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A662WQ67_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQ67_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.890e-30 Identity = 64/117 (54.70%), Postives = 83/117 (70.94%), Query Frame = 1
Query: 4 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHIC-EKQGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWD 351
+G+P+ G GHPRC+FC +RFY A+L+DHL K+H+ C IC I ++YY+DY DLE HFRAEHFLCEE CL KKFVVF S IDL GH HP+ R+I V+F ++R++ D
Sbjct: 250 KGNPREGFMGHPRCDFCFSRFYSTAELYDHLHKNHFECDICLHAMHIQNRYYKDYHDLENHFRAEHFLCEEASCLAKKFVVFKSHIDLQGHLAVEHPYIKTSRKIDVHFTIRRASQD 366
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A6G0XFY2_9STRA (RING-type domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFY2_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.740e-30 Identity = 60/118 (50.85%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 4 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHIC-EKQGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDG 354
QG+P+ G GHP+C+FC+ RFY +LH+HL K+H+ C IC GI ++YY+DY D+E HFR+EHFLCEE ECL KFVVF + I+ H + HPH + R+I V+F ++R++ DG
Sbjct: 173 QGNPEEGFNGHPKCDFCQNRFYGNNELHEHLRKNHFECEICLHAYGIENRYYKDYHDMENHFRSEHFLCEEPECLAAKFVVFKNHIEFQAHLTRNHPHVRVCRKIDVHFSIRRADNDG 290
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A2D4C461_PYTIN (RING-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C461_PYTIN) HSP 1 Score: 140 bits (352), Expect = 4.600e-30 Identity = 63/114 (55.26%), Postives = 80/114 (70.18%), Query Frame = 1
Query: 4 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQ-GILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRS 342
+G+P+ G GHPRC+FC +RFY +L DHL K+H+ C IC + G+ ++YY+DY DLE HFRAEHFLCEE CL KKFVVF S ID H HPH I R+I V+F V+R+
Sbjct: 869 KGNPREGFAGHPRCDFCFSRFYSNTELFDHLHKNHFECDICVRSLGVQNRYYKDYPDLENHFRAEHFLCEEPSCLAKKFVVFKSHIDFQAHMATEHPHIKISRKIDVHFTVRRA 982
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A024UQB2_9STRA (RING-type domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQB2_9STRA) HSP 1 Score: 139 bits (349), Expect = 4.740e-30 Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 4 QGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHIC-EKQGILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSNWDG 354
QG+P+ G GHP+C+FC + +Y +LH+HL K HY C IC GI ++YY+DY D+E HFR++HFLCEE CL KFVVF + I+ H + HPH P+ ++I VNF V+R++ +G
Sbjct: 173 QGNPEEGFNGHPKCDFCSSSYYGNNELHEHLRKHHYECEICLHAYGIENRYYKDYNDMENHFRSDHFLCEEPSCLAAKFVVFKNHIEFQAHMTKNHPHIPVSKRIDVNFSVRRADREG 290
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Match: A0A6A3RRL2_9STRA (C2H2-type domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RRL2_9STRA) HSP 1 Score: 138 bits (347), Expect = 7.800e-30 Identity = 62/114 (54.39%), Postives = 80/114 (70.18%), Query Frame = 1
Query: 7 GDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQ-GILHKYYRDYTDLERHFRAEHFLCEEEECLQKKFVVFDSEIDLAGHTLQMHPHKPIKRQIQVNFKVKRSN 345
G P G GHPRC+FC +RFY +L+DHL K+H+ C IC Q + ++YY+DY DL+ HFRA+HFLCEE ECL KKFVVF S +DL GH HPH R+I V+F V+R++
Sbjct: 165 GKPHEGFMGHPRCDFCFSRFYSTTELYDHLRKNHFECDICLYQLHVQNRYYKDYNDLQNHFRADHFLCEERECLAKKFVVFKSHLDLQGHLAVDHPHIKTSRKIDVHFTVRRAS 278 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1400.2375.1 >prot_E-siliculosus-1a_F_contig1400.2375.1 ID=prot_E-siliculosus-1a_F_contig1400.2375.1|Name=mRNA_E-siliculosus-1a_F_contig1400.2375.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=888bp LQGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQGILHKback to top mRNA from alignment at E-siliculosus-1a_F_contig1400:28323..32604- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1400.2375.1 ID=mRNA_E-siliculosus-1a_F_contig1400.2375.1|Name=mRNA_E-siliculosus-1a_F_contig1400.2375.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4282bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1400:28323..32604- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1400:28323..32604- >mRNA_E-siliculosus-1a_F_contig1400.2375.1 ID=mRNA_E-siliculosus-1a_F_contig1400.2375.1|Name=mRNA_E-siliculosus-1a_F_contig1400.2375.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5328bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1400:28323..32604- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |