Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10257.225.1 vs. uniprot
Match:
D8LE94_ECTSI (Complex1_LYR_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE94_ECTSI)
HSP 1 Score: 154 bits (390), Expect = 8.710e-45
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 2
Query: 2 SPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHESGSNDPQLKKRMEAVKTHALADLKQRQQERDGKR 238
SPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHESGSNDPQLKKRMEAVKTHALADLKQRQQERDGKR
Sbjct: 29 SPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHESGSNDPQLKKRMEAVKTHALADLKQRQQERDGKR 107
BLAST of mRNA_E-siliculosus-1a_F_contig10257.225.1 vs. uniprot
Match:
A0A835Z7F8_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F8_9STRA)
HSP 1 Score: 70.9 bits (172), Expect = 2.910e-12
Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 2
Query: 2 SPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHESGSNDPQLKKRMEAVKTHALADLKQRQQER 226
S KG +R ++ TEF+K++ ETDP ++ LK A+RGLSNY +HES S D +LK RME + A++ + Q+ R
Sbjct: 30 SAKGDAMRKMISTEFRKHIDETDPARVAILKAAAVRGLSNYFLHESASRDAKLKARMEDQRIAVQAEIGEEQRAR 104
BLAST of mRNA_E-siliculosus-1a_F_contig10257.225.1 vs. uniprot
Match:
A0A7S1ZML8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZML8_TRICV)
HSP 1 Score: 67.4 bits (163), Expect = 1.430e-10
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 2
Query: 2 SPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHESGSNDPQLKKRMEAVKTHALADL 205
SPK LR ++++EF KN E DP KIE++K GAIR LSNY+++ESG+ D +L K M ++ +
Sbjct: 55 SPKAMALRAMVQSEFSKNRDEKDPAKIESMKAGAIRALSNYMLYESGAKDQKLGKAMNKFNQDTISGI 122
BLAST of mRNA_E-siliculosus-1a_F_contig10257.225.1 vs. uniprot
Match:
R1E7M2_EMIHU (Complex1_LYR_dom domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E7M2_EMIHU)
HSP 1 Score: 61.2 bits (147), Expect = 3.300e-8
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 2
Query: 2 SPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHES 139
SPKG+ +R ++R +FK NMGETDP KI LK AI G+ NY++HE+
Sbjct: 71 SPKGEAMRSMIRQQFKSNMGETDPTKINELKMRAISGIQNYVIHEN 116
BLAST of mRNA_E-siliculosus-1a_F_contig10257.225.1 vs. uniprot
Match:
A0A482SGE8_9ARCH (LYR motif-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SGE8_9ARCH)
HSP 1 Score: 60.8 bits (146), Expect = 3.380e-8
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 2
Query: 2 SPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHESGSNDPQLKK 166
S KG+ +R +LR EF+KN DP KIE LK A+RGL+NYL+ ES + D +L+K
Sbjct: 51 SQKGENIRRVLRHEFRKNAKLEDPAKIEQLKSNAVRGLANYLMIESATKDTKLQK 105
BLAST of mRNA_E-siliculosus-1a_F_contig10257.225.1 vs. uniprot
Match:
A0A7S3WS84_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WS84_EMIHU)
HSP 1 Score: 61.2 bits (147), Expect = 3.920e-8
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 2
Query: 2 SPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHES 139
SPKG+ +R ++R +FK NMGETDP KI LK AI G+ NY++HE+
Sbjct: 83 SPKGEAMRSMIRQQFKSNMGETDPTKINELKMRAISGIQNYVIHEN 128
BLAST of mRNA_E-siliculosus-1a_F_contig10257.225.1 vs. uniprot
Match:
R1CQ33_EMIHU (Complex1_LYR_dom domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CQ33_EMIHU)
HSP 1 Score: 61.2 bits (147), Expect = 4.930e-8
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 2
Query: 2 SPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHES 139
SPKG+ +R ++R +FK NMGETDP KI LK AI G+ NY++HE+
Sbjct: 96 SPKGEAMRSMIRQQFKSNMGETDPTKINELKMRAISGIQNYVIHEN 141
BLAST of mRNA_E-siliculosus-1a_F_contig10257.225.1 vs. uniprot
Match:
A0A024GHE4_9STRA (Phosphoribosylaminoimidazolesuccinocarboxamide synthase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GHE4_9STRA)
HSP 1 Score: 59.3 bits (142), Expect = 1.380e-6
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 2
Query: 2 SPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHESGSNDPQLKKRMEA 178
S KG ++ ++R EF K ETDP KIE LKG A+RGLSNYLV + S D +K M++
Sbjct: 62 SKKGLAIKELVRREFDKGKRETDPEKIEMLKGNAVRGLSNYLVMANASKDKGMKNAMKS 120
BLAST of mRNA_E-siliculosus-1a_F_contig10257.225.1 vs. uniprot
Match:
A0A2I0VL77_9ASPA (Complex1_LYR_dom domain-containing protein n=3 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0VL77_9ASPA)
HSP 1 Score: 52.0 bits (123), Expect = 7.590e-6
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 2
Query: 29 ILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHES 139
++R +FKKNM ETDPVKI+ LK A RGL N+++HES
Sbjct: 1 MVRQQFKKNMHETDPVKIQKLKDDAARGLINHILHES 37
BLAST of mRNA_E-siliculosus-1a_F_contig10257.225.1 vs. uniprot
Match:
A0A1Y1IKT5_KLENI (Complex1_LYR_dom domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IKT5_KLENI)
HSP 1 Score: 50.1 bits (118), Expect = 9.370e-5
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 2
Query: 20 LRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHES 139
LR +R +FKKNM E DP KI+A K A+RGLSNY+V E+
Sbjct: 35 LREQVRLQFKKNMDERDPDKIQAQKEAAVRGLSNYMVFEA 74
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10257.225.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 10
0 1 Expect = 8.71e-45 / Id = 100.00 Expect = 2.91e-12 / Id = 45.33 Expect = 1.43e-10 / Id = 45.59 Expect = 3.30e-8 / Id = 56.52 Expect = 3.38e-8 / Id = 52.73 Expect = 3.92e-8 / Id = 56.52 Expect = 4.93e-8 / Id = 56.52 Expect = 1.38e-6 / Id = 50.85 Expect = 7.59e-6 / Id = 62.16 Expect = 9.37e-5 / Id = 60.00 Sequence D8LE94_ECTSI A0A835Z7F8_9STRA A0A7S1ZML8_TRICV R1E7M2_EMIHU A0A482SGE8_9ARCH A0A7S3WS84_EMIHU R1CQ33_EMIHU A0A024GHE4_9STRA A0A2I0VL77_9ASPA A0A1Y1IKT5_KLENI back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10257.225.1
>prot_E-siliculosus-1a_F_contig10257.225.1 ID=prot_E-siliculosus-1a_F_contig10257.225.1|Name=mRNA_E-siliculosus-1a_F_contig10257.225.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=162bp
EPQGAAAPSYPENRVQEEHGRDRPSQDRSAQGRRNTRIVKLLGARIGQQR back to top mRNA from alignment at E-siliculosus-1a_F_contig10257:669..2112+
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10257.225.1 ID=mRNA_E-siliculosus-1a_F_contig10257.225.1|Name=mRNA_E-siliculosus-1a_F_contig10257.225.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1444bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10257:669..2112+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GAGCCCCAAGGGGCAGCAGCTCCGTCTTATCCTGAGAACCGAGTTCAAGA
AGAACATGGGCGAGACCGACCCAGTCAAGATAGAAGCGCTCAAGGGAGG G
TGAGGCACGAAACATGATTTGTCGTTGAGAGTACCACACTATTTCTGTTG
TTCGCCCATTGAAGCTTGGGAGCATACCTTGGGCCGCTCACAGCAGAGGT
TATGTGCCTCTGTGATAGGTGCCTACGCATTCGTCCAGGAATGGGGCTGC
CTGTTCTCCGAGCAAAAAAAATTATCGCGGTTATTCGTCCAGCGGTTAAA
TTAGTGCACGACTTACGTGCTGTCCAAGCGGAATCTGCGCGTATTGTTGG
ACCTCGCGCTGTCGACTTTTTTTTTATCGAATACCAGACAGAGCGGTTTC
GGTCGGCGACAATCCAATCCTAATCCTTCCTTGTGCGCGCTCGTACGTCG
GTCTGTCCTGCCTTGTATTCTGGCAGCGCAATACGAGGATTGTCAAACTA
CTTGGTGCACGAATCGGGCAG GTGAGGAATCCAGCTCGACTACTATGTAC
AGCAGCAGTGGTGTTTTATTTCACGCGCTGACCTCCTCTTAATCCCGCAC
TGCTGTACCGTCTAACTACCTCGAAGACGTTCCTGCTCACCTACAATATT
TTCAGCTTTCCCATACCTTTCAAAATCACAGTTGGTTGCGACGCCAGCCA
GACCGACGAGATGTATGTGTAGCCTCACGTTTGTTGCTAGTTTTTTTTTT
GCGAAACCACCTTCTTCGCCTCCTGTTTCACTCGTGTTTCTTTTCGTCTT
GTACTTTTTCCACTGCCGCCTTCCTCTTCGCTTCTTTTGCGGAACCACCG
CAATACGCTCTGTCTGATTGGTTAGCAACGACCCGCAACTGAAAAAGCGA
ATGGAAGCAGTCAAGACCCACGCCTTGGCCGACCTCAAGCAACGACAACA
GGAACGGGACGGGAAGCGGTGACAGCCAGTCCGCTTGGTTGCCGCTCATG
TCCGATCCCACAAAAATTTACCTGTCGCGGACGAACCCTGTTGGGATCTA
GAGTAATTGATGGTCTGCGTGCGGGCTCCCATTTTTCGGTGCATGTTTTG
GTATTCTTGTGGGATGTAAATATGTCGATGGTGGACGACGGGAGTCCCGC
ATGGAGTGCAGGTAGTTCATCAAGTAGTGGATGTGCAGAGCATATTATGA
TGAGAACGTACCCATGA ACGCGGTGTGCTGGGTACCAAGTACCAGGACGG
AACGAGAGGGAGATTAAGAACCAGCCTCAGCTCGTGCTATGCACACAAGA
TGTCGCATGGTTGAAAATGTCGGATGTTGCACTGCTTTTACCCGCGTTGC
GTGCCCGGTTTCAAGGCAAAAAAATGTTATCGCGTCCGCTGTTTGACAAA
GACAACGTCCATTGAACGATCGCTCCCCACGAGCATAGCTAGCA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10257:669..2112+
>mRNA_E-siliculosus-1a_F_contig10257.225.1 ID=mRNA_E-siliculosus-1a_F_contig10257.225.1|Name=mRNA_E-siliculosus-1a_F_contig10257.225.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=972bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10257:669..2112+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top