prot_E-siliculosus-1a_F_contig1367.2188.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1367.2188.1
Unique Nameprot_E-siliculosus-1a_F_contig1367.2188.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length205
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: A0A484NKE1_9ASTE (F-box domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484NKE1_9ASTE)

HSP 1 Score: 67.8 bits (164), Expect = 1.110e-9
Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 0
Query:   25 RKRVARDMVPYKEALRNVPLKTRTTQRSVAHAIGLPQETFRRNMKKLGVKVTKRFLKPLLTKQGKIDRLRWSRRWVAPSTVPGEPRKFKGMANAVTVDEKWFF 127
            RKRVA D+    +A+ + PL+ RTT RS+A AIG P+ +    +KK  ++     +KP LT   K+ RLR+    V P ++P +PR F    N + +DEKWFF
Sbjct:  506 RKRVAMDV----QAIADTPLRNRTTIRSLAAAIGKPKSSVHEWIKKGMLRSHSNAIKPYLTDDNKLSRLRFCLNQVDPHSIPLQPR-FNSFHNVLHIDEKWFF 603          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: A0A484LCT6_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LCT6_9ASTE)

HSP 1 Score: 65.5 bits (158), Expect = 5.330e-9
Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 0
Query:   25 RKRVARDMVPYKEALRNVPLKTRTTQRSVAHAIGLPQETFRRNMKKLGVKVTKRFLKPLLTKQGKIDRLRWSRRWVAPSTVPGEPRKFKGMANAVTVDEKWFF 127
            RKR+  D     +A+   PL+ RTT RS+A AIG P+ T    +KK  ++     +KP LT   K+ RLR+    V P ++P +PR F    N + +DEKWFF
Sbjct:   52 RKRIVIDA----QAIAETPLRNRTTIRSLAAAIGKPKSTVHEWIKKGMLRSHSNVIKPYLTDDNKVARLRFCLNQVEPGSMPLQPR-FNSFHNVLHIDEKWFF 149          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: A0A834HDF7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HDF7_RHOSS)

HSP 1 Score: 64.3 bits (155), Expect = 1.340e-8
Identity = 42/102 (41.18%), Postives = 63/102 (61.76%), Query Frame = 0
Query:   42 VPLKTRTTQRSVAHAIGLPQETFRRNMKKLGVKVTKRFLKPLLTKQGKIDRLRWSRRWVAPSTVPGEPRKFKGMANAVTVDEKWFFRLQRQTD---VLPARR 140
            VPL+ RT+ RS+A A+ +PQ T  R +K+  ++     +KP LT++GK  RLR+    + PS++  +P  FK M N V +DEKWFF L R+ +   +LP  R
Sbjct:  100 VPLRRRTSIRSLAKAVTVPQTTLFRRIKEGDIRPHTIAVKPHLTEEGKKARLRFCFSMLEPSSLANDP-VFKNMYNYVHIDEKWFF-LSREVERYYLLPRER 199          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: UPI00073A4D58 (uncharacterized protein LOC107061740 n=4 Tax=Solanum tuberosum TaxID=4113 RepID=UPI00073A4D58)

HSP 1 Score: 63.5 bits (153), Expect = 2.660e-8
Identity = 38/111 (34.23%), Postives = 65/111 (58.56%), Query Frame = 0
Query:   22 SCRRKRVARDMVPYKEALRNVPLKTRTTQRSVAHAIGLPQETFRRNMKKLGVKVTKRFLKPLLTKQGKIDRLRWSRRWVAPSTVPGEPRKFKGMANAVTVDEKWFFRLQRQ 132
            +C RKR+  DM  ++E    +PL+ RTT R++A ++ + + T  R +K   ++     +KP LT+Q KI RL++    V   ++P +P  F  M N V +DEKWF+  +++
Sbjct:  175 NCGRKRIEIDMNRFRE----IPLRKRTTLRTLACSLDVNKSTLGRRLKGKEIQRHSNTIKPFLTEQNKISRLQFCLSMVDRDSIPDDP-SFIDMYNIVHIDEKWFYMTKKK 280          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: A0A8J8Y2I6_ORYSJ (Uncharacterized protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A8J8Y2I6_ORYSJ)

HSP 1 Score: 61.6 bits (148), Expect = 1.140e-7
Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   22 SCRRKRVARDMVPYKEALRNVPLKTRTTQRSVAHAIGLPQETFRRNMKKLGVKVTKRFLKPLLTKQGKIDRLRWSRRWVAPSTVPGEPRKFKGMANAVTVDEKWF 126
            +C RK+V  D+      +  +PL+ R+T RS+A A+G+P+ T  R  K+  ++     LKP L +  K +RLRW    +   T+P  P KF  M N + +DEKWF
Sbjct:  187 NCGRKKVEIDL----SVVAAIPLRQRSTIRSLADALGVPKSTLHRLFKEGHLQRHSNSLKPYLKEANKKERLRWCVGMLDHRTLPNNP-KFIEMENIIHIDEKWF 286          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: A0A484LHL8_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LHL8_9ASTE)

HSP 1 Score: 58.9 bits (141), Expect = 2.030e-7
Identity = 43/133 (32.33%), Postives = 70/133 (52.63%), Query Frame = 0
Query:    1 MSALWEHYQAEKGADVLSPDPSCR------RKRVARDMVPYKEALRNVPLKTRTTQRSVAHAIGLPQETFRRNMKKLGVKVTKRFLKPLLTKQGKIDRLRWSRRWVAPSTVPGEPRKFKGMANAVTVDEKWFF 127
            +S+LW   +A+    VL  D S R      RKR A D     E++  +PL+ RTT RS+A ++G+ + T    +K+  ++     +KP L    +  RL +  + +  +++P  P  FKG  N + +DEKWFF
Sbjct:   25 ISSLWRKAKAQLQVGVLI-DVSSRMAGNVGRKRAALDF----ESITLIPLRRRTTIRSLASSVGISKSTVHNWVKRSILRSHTNAIKPTLNDANRRQRLIFCLQQLEETSIPSNPT-FKGFKNVLHIDEKWFF 151          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: A0A1R3G0N2_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3G0N2_9ROSI)

HSP 1 Score: 59.3 bits (142), Expect = 5.320e-7
Identity = 35/124 (28.23%), Postives = 70/124 (56.45%), Query Frame = 0
Query:    4 LWEHYQAEKGADVLSPDPSCRRKRVARDMVPYKEALRNVPLKTRTTQRSVAHAIGLPQETFRRNMKKLGVKVTKRFLKPLLTKQGKIDRLRWSRRWVAPSTVPGEPRKFKGMANAVTVDEKWFF 127
            +W+ Y++    DV S      +KR+  DM      L+ +PL+ R T ++++ +    + T +R +K   ++     +KP LT + KI+R+++S   +  +++P +P  F+GM + + +DEKWF+
Sbjct:   64 IWKQYKSIINGDVSSRKIYSGQKRIEIDM----SELQKIPLRKRITLKALSCSFS--ESTVQRRVKSGSIRKHSNAIKPDLTPENKIERMKFSHSMIDKTSIPHDPI-FEGMYDVIHIDEKWFY 180          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: B9FLL3_ORYSJ (Uncharacterized protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=B9FLL3_ORYSJ)

HSP 1 Score: 59.3 bits (142), Expect = 7.440e-7
Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 0
Query:   22 SCRRKRVARDMVPYKEALRNVPLKTRTTQRSVAHAIGLPQETFRRNMKKLGVKVTKRFLKPLLTKQGKIDRLRWSRRWVAPSTVPGEPRKFKGMANAVTVDEKWF 126
            +C RK+V  D+      +  +PL+ R+T RS+A A+G+ + T  R  K+  ++     LKP L +  K +RLRW    +   T+P  P KF  M N + +DEKWF
Sbjct:  189 NCGRKKVEIDL----SVVAAIPLRQRSTIRSLAEALGVSKSTLHRLFKEGHLRRHSNSLKPYLKEANKKERLRWCVGMLDHRTLPNNP-KFIEMENIIHIDEKWF 288          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: Q7G793_ORYSJ (Transposon protein, putative, Mariner sub-class n=4 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7G793_ORYSJ)

HSP 1 Score: 59.3 bits (142), Expect = 7.520e-7
Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   22 SCRRKRVARDMVPYKEALRNVPLKTRTTQRSVAHAIGLPQETFRRNMKKLGVKVTKRFLKPLLTKQGKIDRLRWSRRWVAPSTVPGEPRKFKGMANAVTVDEKWF 126
            +C RK+V  D+      +  +PL+ R+T RS+A A+G+ + T  R  K+  ++     LKP L +  K +RL+W    +   T+P +P KF  M N V +DEKWF
Sbjct:  210 NCGRKKVVIDL----SVVSAIPLRQRSTIRSLAEALGVSKSTLHRLFKEGHLRRHSNSLKPYLKEANKKERLQWCVGMLDHRTLPNDP-KFIEMENIVHIDEKWF 309          
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: E5FNA4_PHYED (Transposase n=1 Tax=Phyllostachys edulis TaxID=38705 RepID=E5FNA4_PHYED)

HSP 1 Score: 58.5 bits (140), Expect = 1.270e-6
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   22 SCRRKRVARDMVPYKEALRNVPLKTRTTQRSVAHAIGLPQETFRRNMKKLGVKVTKRFLKPLLTKQGKIDRLRWSRRWVAPSTVPGEPRKFKGMANAVTVDEKWFFRLQR 131
            +C RK VA D     EA+++VPL +RTT R +A A+ + + T  R MK+   +     +K  LT+  K  R+++    +   ++P EP  F+GM N V +DEKWF+R ++
Sbjct:   94 NCGRKWVAFDP----EAIKDVPLSSRTTIRDLAGALNISKSTLFRRMKEGKFRRHTNDIKFTLTEDNKRARVKFCLSMLDKLSMPQEPT-FEGMYNIVYIDEKWFYRTRK 198          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A484NKE1_9ASTE1.110e-940.78F-box domain-containing protein n=1 Tax=Cuscuta ca... [more]
A0A484LCT6_9ASTE5.330e-939.81Uncharacterized protein n=2 Tax=Cuscuta campestris... [more]
A0A834HDF7_RHOSS1.340e-841.18Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
UPI00073A4D582.660e-834.23uncharacterized protein LOC107061740 n=4 Tax=Solan... [more]
A0A8J8Y2I6_ORYSJ1.140e-737.14Uncharacterized protein n=2 Tax=Oryza sativa subsp... [more]
A0A484LHL8_9ASTE2.030e-732.33Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]
A0A1R3G0N2_9ROSI5.320e-728.23Uncharacterized protein n=1 Tax=Corchorus olitoriu... [more]
B9FLL3_ORYSJ7.440e-736.19Uncharacterized protein n=1 Tax=Oryza sativa subsp... [more]
Q7G793_ORYSJ7.520e-736.19Transposon protein, putative, Mariner sub-class n=... [more]
E5FNA4_PHYED1.270e-636.36Transposase n=1 Tax=Phyllostachys edulis TaxID=387... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47169:SF1coord: 5..134
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 5..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1367contigE-siliculosus-1a_F_contig1367:13543..14157 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1367.2188.1mRNA_E-siliculosus-1a_F_contig1367.2188.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1367 13043..14295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1367.2188.1 ID=prot_E-siliculosus-1a_F_contig1367.2188.1|Name=mRNA_E-siliculosus-1a_F_contig1367.2188.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=205bp
MSALWEHYQAEKGADVLSPDPSCRRKRVARDMVPYKEALRNVPLKTRTTQ
RSVAHAIGLPQETFRRNMKKLGVKVTKRFLKPLLTKQGKIDRLRWSRRWV
APSTVPGEPRKFKGMANAVTVDEKWFFRLQRQTDVLPARRRTYPGPEGST
QEPHRQGDVPRSCRATEAQHLHQLQLRRGRLEFTPSRINNEPSDLGGTSP
LAQW*
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