mRNA_E-siliculosus-1a_F_contig1367.2188.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 186 bits (471), Expect = 7.270e-52 Identity = 95/196 (48.47%), Postives = 135/196 (68.88%), Query Frame = 3
Query: 669 TGKIGIYPFTHQQRAQRSRGNKPAGTMVTKATEVTKESYKKMLIDRVIPDIKRKFPRPPANPNPEDGIVWLQQDNARPHLVNDDPELTAALTSDGWDIRMLNQPANSPDTKILDRGFFASIQSLQDKTTPRNIDDLLKVVNDAWEEESPAKMNRVWLSLQACLEQIMLAGGDNAYKLPLLHKGRLETAG-TLPWQL 1253
TGK+GI+ FT Q+ AQR+ N+ AGTM TK EVTKE +K+ ++D V P IK ++P +++Q DN H +N DP++ AA +DGWDIR++NQP+NSPDT ILD GFF ++QSLQD+ TPR +D+ + V A+EE+SP+ ++VW+SLQA L QI+LA G+N +KLP L K +G ++P +L
Sbjct: 89 TGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGR------TIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAIL-QIILAKGNNTFKLPHLKKDNAANSGRSIPKEL 277
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: UPI0014933F33 (uncharacterized protein LOC117838342 n=2 Tax=Setaria viridis TaxID=4556 RepID=UPI0014933F33) HSP 1 Score: 177 bits (448), Expect = 6.120e-49 Identity = 84/191 (43.98%), Postives = 128/191 (67.02%), Query Frame = 3
Query: 672 GKIGIYPFTHQQRAQRSRGNKPAGTMVTKATEVTKESYKKMLIDRVIPDIKRKFPRPPANPNPEDGIVWLQQDNARPHLVNDDPELTAALTSDGWDIRMLNQPANSPDTKILDRGFFASIQSLQDKTTPRNIDDLLKVVNDAWEEESPAKMNRVWLSLQACLEQIMLAGGDNAYKLPLLHKGRLETAGTLP 1244
GK+G +PF ++ AQR N+P GT +TK +V +++ K +I +++ I+ ++P+ AN I+W+QQDN+ H+ DDP+ A+ G DIR++NQPANSPD LD GFFAS+QS+ D+TT RN+DD++ V + +E +P +NRV+L+LQ C+ ++M G N YK+P ++K RLE AG LP
Sbjct: 79 GKLGCWPFVREEPAQRRSDNRPRGTPITKTMKVDRQTMKSYMITKLLEAIRIRWPQEDANE-----IIWIQQDNSPSHIHADDPDFKTAVAHTGLDIRIMNQPANSPDMNCLDLGFFASLQSMTDRTTSRNMDDIIANVINEYEHYNPVILNRVFLTLQGCMIEVMKDNGGNRYKIPHMNKPRLEAAGMLP 264
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: Q49KC8_PEA (Transposase n=2 Tax=Pisum sativum TaxID=3888 RepID=Q49KC8_PEA) HSP 1 Score: 177 bits (450), Expect = 8.180e-48 Identity = 94/198 (47.47%), Postives = 132/198 (66.67%), Query Frame = 3
Query: 663 TSTGKIGIYPFTHQQRAQRSRGNKPAGTMVTKA-TEVTKESYKKMLIDRVIPDIKRKFPRPPANPNPEDGIVWLQQDNARPHLVNDDPELTAALTSDGWDIRMLNQPANSPDTKILDRGFFASIQSLQDKTTPRNIDDLLKVVNDAWEEESPAKMNRVWLSLQACLEQIMLAGGDNAYKLPLLHKGRLETAGTLPWQL 1253
T +GKIG++PF + A RS N+ AGTMVTKA T V ++ + LID+V+P I+ K+PR + + +++QQDNAR H+ +DDP A T DG+DIR++ QPANSPD ILD GFF++IQSLQ K P+ ID+L+ V ++E K NR+++SLQ C+ +IM G N YK+P ++K RLE G LP Q+
Sbjct: 203 TFSGKIGVFPFVTHEPAIRSSINRVAGTMVTKAITTVNRDVVRSFLIDKVLPAIREKWPR-----DEFESTIFIQQDNARTHINHDDPLFREAATKDGFDIRLMCQPANSPDLNILDLGFFSAIQSLQYKEAPKTIDELISAVVKSFENFPSIKSNRIFVSLQLCMIEIMKEKGSNKYKIPHVNKERLERVGQLPIQI 395
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: A0A8I6WKB7_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6WKB7_HORVV) HSP 1 Score: 171 bits (432), Expect = 1.030e-46 Identity = 87/197 (44.16%), Postives = 130/197 (65.99%), Query Frame = 3
Query: 663 TSTGKIGIYPFTHQQRAQRSRGNKPAGTMVTKATEVTKESYKKMLIDRVIPDIKRKFPRPPANPNPEDGIVWLQQDNARPHLVNDDPELTAALTSDGWDIRMLNQPANSPDTKILDRGFFASIQSLQDKTTPRNIDDLLKVVNDAWEEESPAKMNRVWLSLQACLEQIMLAGGDNAYKLPLLHKGRLETAGTLPWQL 1253
T +GKIGI+PF + AQR N+P GTM TK+ +V ++ ++ +I+ ++P I+ +P N ++++QDNA+PH++ +DPE A+ S G DIR++ QPANSPD LD GFF S+QSL D +PR + DL+K V + +E K+NRV+LSLQAC+ +I+ G N YK+P ++K RLE+ G LP +L
Sbjct: 61 TFSGKIGIWPFVKEIPAQRKSDNRPRGTMETKSIKVNRQVMREFMIENLLPAIQSSWPD-----NDAGQTIFIKQDNAKPHILPNDPEFLVAVESTGLDIRLIQQPANSPDLNGLDLGFFNSLQSLTDCLSPRTLQDLIKGVLEEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHVNKERLESLGLLPQRL 252
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: UPI00064DC2CF (uncharacterized protein LOC105977322 n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064DC2CF) HSP 1 Score: 176 bits (447), Expect = 2.220e-46 Identity = 96/198 (48.48%), Postives = 131/198 (66.16%), Query Frame = 3
Query: 669 TGKIGIYPFTHQQRAQRSRGNKPAGTMVTKA-TEVTKESYKKMLIDRVIPDIKRKFPRPPANPNPEDGI--VWLQQDNARPHLVNDDPELTAALTSDGWDIRMLNQPANSPDTKILDRGFFASIQSLQDKTTPRNIDDLLKVVNDAWEEESPAKMNRVWLSLQACLEQIMLAGGDNAYKLPLLHKGRLETAGTLPWQL 1253
+GKIG++PF Q+ A+R+ N+ AGTM TK T V ++ + LID+VIP IK K+PR ED +++QQDNAR H+ +D E A DG+DIR++ QP NSPD +LD GFFA+IQSLQ K P+NID+L+ V A+E S AK NR++L+LQ C+ +IM A G N YK+P ++K LE G LP Q+
Sbjct: 323 SGKIGVFPFVTQEPARRTSVNRVAGTMETKPITSVNRDVIRSYLIDKVIPAIKEKWPR-------EDSRYPIFIQQDNARSHISQNDDEFLRAAVQDGFDIRLMCQPPNSPDLNVLDLGFFAAIQSLQYKEAPKNIDELVNAVVHAFEFFSTAKSNRIFLTLQLCMIEIMRAKGSNKYKIPHINKAMLEREGRLPVQM 513
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 174 bits (440), Expect = 5.540e-46 Identity = 94/196 (47.96%), Postives = 127/196 (64.80%), Query Frame = 3
Query: 660 PTSTGKIGIYPFTHQQRAQRSRGNKPAGTMVTKA-TEVTKESYKKMLIDRVIPDIKRKFPRPPANPNPEDGIVWLQQDNARPHLVNDDPELTAALTSDGWDIRMLNQPANSPDTKILDRGFFASIQSLQDKTTPRNIDDLLKVVNDAWEEESPAKMNRVWLSLQACLEQIMLAGGDNAYKLPLLHKGRLETAGTLP 1244
PT GK+GI+PFT AQR N+ GT+ TK T + KE + +I ++IP IK K+P + +++QQDNA PH+ DPE A SDG+ I ++ QP NSPDT ILD GFF +IQSLQ + RN+D+L++ V A+EE +P +NRV+LSLQACL QI+ GDN+YK+P ++K RLE G LP
Sbjct: 225 PTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPDWASKE------IYIQQDNATPHITATDPEFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTGGLP 414
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: UPI00053F3BA8 (uncharacterized protein LOC104908869 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F3BA8) HSP 1 Score: 171 bits (432), Expect = 1.270e-45 Identity = 90/192 (46.88%), Postives = 128/192 (66.67%), Query Frame = 3
Query: 672 GKIGIYPFTHQQRAQRSRGNKPAGTMVTKA-TEVTKESYKKMLIDRVIPDIKRKFPRPPANPNPEDGIVWLQQDNARPHLVNDDPELTAALTSDGWDIRMLNQPANSPDTKILDRGFFASIQSLQDKTTPRNIDDLLKVVNDAWEEESPAKMNRVWLSLQACLEQIMLAGGDNAYKLPLLHKGRLETAGTLP 1244
GKIGIYPF + A+R N+ AGT+ TK T +TKE ++ LI VIP IK+K+P P A + +W+QQDNARPH+ + D + A TSDG+++R++NQPA SPD +LD GFF +IQSL+D+ P+ +D L+KVV A++E P NR++LSLQ C+ +++ G+N Y P + K R+E G LP
Sbjct: 169 GKIGIYPFVDKVPAKRRSNNREAGTLETKPITSITKEVMRQKLIQSVIPAIKQKWP-PYACKD-----IWIQQDNARPHIDSTDADFIEAATSDGFNMRLVNQPAQSPDLNVLDLGFFNAIQSLKDQKAPKTVDKLIKVVQAAYDEYDPKLGNRIFLSLQYCMIEVLKLKGNNNYNPPHVGKQRMEREGVLP 354
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: UPI001C275C9E (uncharacterized protein LOC121754448 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C275C9E) HSP 1 Score: 168 bits (426), Expect = 2.070e-45 Identity = 91/199 (45.73%), Postives = 130/199 (65.33%), Query Frame = 3
Query: 660 PTSTGKIGIYPFTHQQRAQRSRGNKPAGTMVTKAT-EVTKESYKKMLIDRVIPDIKRKFPRPPANPNPEDGIVWLQQDNARPHLVNDDPELTAALTSDGWDIRMLNQPANSPDTKILDRGFFASIQSLQDKTTPRNIDDLLKVVNDAWEEESPAKMNRVWLSLQACLEQIMLAGGDNAYKLPLLHKGRLETAGTLPWQL 1253
P GKIGI+PFT Q A R N+P GT+ TK V KE+ ++ L++++IP IK K+P AN N E +++QQDNA+PHL + D + A ++DG+ +++QPANSPDT +LD GFF +IQSLQD NID+LL V +++E +P +N+V+L+LQ+CL +I+ G N YK+P L+K RL LP L
Sbjct: 81 PIFDGKIGIFPFTQQVPAMRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPTIKAKWP---ANANKE---IYIQQDNAKPHLKSSDLQFEAIASTDGFKFHLVSQPANSPDTNVLDLGFFRAIQSLQDDKLATNIDELLANVWSSFQELTPQTLNKVFLTLQSCLTKILEVHGGNNYKIPHLNKDRLSRTVGLPTSL 273
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 170 bits (430), Expect = 2.090e-45 Identity = 90/196 (45.92%), Postives = 128/196 (65.31%), Query Frame = 3
Query: 669 TGKIGIYPFTHQQRAQRSRGNKPAGTMVTKATE-VTKESYKKMLIDRVIPDIKRKFPRPPANPNPEDGIVWLQQDNARPHLVNDDPELTAALTSDGWDIRMLNQPANSPDTKILDRGFFASIQSLQDKTTPRNIDDLLKVVNDAWEEESPAKMNRVWLSLQACLEQIMLAGGDNAYKLPLLHKGRLETAGTLPWQL 1253
+GKIGI+PFT + A+R+ N+ AGTMVTK E +TKE K LI++VIP I K+P+ + +QQDNA+PH+ ++ E A + DG+DIR++ QP NSPD +LD GFF SIQ LQ + P I++L+ V +++E K+NRV+L+ Q C+++IM GDN YK+P + K RLE GTLP Q+
Sbjct: 155 SGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQGMRT-------IIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQI 343
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Match: UPI002009AF48 (uncharacterized protein LOC125198349 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009AF48) HSP 1 Score: 167 bits (424), Expect = 2.590e-45 Identity = 92/195 (47.18%), Postives = 129/195 (66.15%), Query Frame = 3
Query: 672 GKIGIYPFTHQQRAQRSRGNKPAGTMVTKAT-EVTKESYKKMLIDRVIPDIKRKFPRPPANPNPEDGIVWLQQDNARPHLVNDDPELTAALTSDGWDIRMLNQPANSPDTKILDRGFFASIQSLQDKTTPRNIDDLLKVVNDAWEEESPAKMNRVWLSLQACLEQIMLAGGDNAYKLPLLHKGRLETAGTLPWQL 1253
GKIGI+PFT Q A+R N+P GT+ TK V KE+ ++ L++++IP IK K+P AN N E +++QQDNA+PHL D + AA ++DG+ +++QPANS DT +LD GFF +IQSLQD NID+LL V ++EE +P +N+V+LSLQ+CL +I+ G N YK+P L+K RL LP L
Sbjct: 67 GKIGIFPFTEQVPAKRKSKNRPKGTLETKPIPSVNKEAMRECLLNQIIPAIKAKWP---ANANKE---IYIQQDNAKPHLKASDLQFEAAASTDGFKFHLISQPANSLDTNVLDLGFFRAIQSLQDDKLATNIDELLANVWSSFEELTPQTLNKVFLSLQSCLRKILEVHGGNNYKIPHLNKDRLSRTVGLPTSL 255 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1367.2188.1 >prot_E-siliculosus-1a_F_contig1367.2188.1 ID=prot_E-siliculosus-1a_F_contig1367.2188.1|Name=mRNA_E-siliculosus-1a_F_contig1367.2188.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=205bp MSALWEHYQAEKGADVLSPDPSCRRKRVARDMVPYKEALRNVPLKTRTTQback to top mRNA from alignment at E-siliculosus-1a_F_contig1367:13043..14295- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1367.2188.1 ID=mRNA_E-siliculosus-1a_F_contig1367.2188.1|Name=mRNA_E-siliculosus-1a_F_contig1367.2188.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1253bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1367:13043..14295- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1367:13043..14295- >mRNA_E-siliculosus-1a_F_contig1367.2188.1 ID=mRNA_E-siliculosus-1a_F_contig1367.2188.1|Name=mRNA_E-siliculosus-1a_F_contig1367.2188.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1230bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1367:13043..14295- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |