prot_E-siliculosus-1a_F_contig1364.2175.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1364.2175.1
Unique Nameprot_E-siliculosus-1a_F_contig1364.2175.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length129
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1364.2175.1 vs. uniprot
Match: A0A6H5KBW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW0_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.610e-38
Identity = 88/103 (85.44%), Postives = 91/103 (88.35%), Query Frame = 0 
Query:   29 SASAVTSPGYAPGDVDMLAEMGFDRARVVLALKACSGSVERAAEWLLT--GDXXXXXXGIPGSGGMVVHGPHLPGGGAFTGGQDGDGGGTGWLGGGTELSKIV 129
            SASA+ SP +A  DVDMLAEMGFDRARVVLALKACSGSVERAAEWLLT  GD XXXXX +PGSGGMV HGPHLPGGGA  GGQDGDGGG GWLGGGTELSKIV
Sbjct:  424 SASALISPEFASDDVDMLAEMGFDRARVVLALKACSGSVERAAEWLLTWDGDDXXXXXXVPGSGGMV-HGPHLPGGGALAGGQDGDGGGMGWLGGGTELSKIV 525
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1364.2175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KBW0_9PHAE1.610e-3885.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 39..76
e-value: 6.9E-7
score: 38.9
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 43..74
e-value: 1.3E-11
score: 44.2
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 43..77
score: 13.173
NoneNo IPR availableGENE3D1.10.8.10coord: 7..82
e-value: 4.2E-15
score: 57.2
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 32..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1364contigE-siliculosus-1a_F_contig1364:19267..19653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1364.2175.1mRNA_E-siliculosus-1a_F_contig1364.2175.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1364 19267..19653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1364.2175.1 ID=prot_E-siliculosus-1a_F_contig1364.2175.1|Name=mRNA_E-siliculosus-1a_F_contig1364.2175.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=129bp
PPPAKIPPPASRPLSEQIAAAVAAAPTTSASAVTSPGYAPGDVDMLAEMG
FDRARVVLALKACSGSVERAAEWLLTGDDDDGGGGIPGSGGMVVHGPHLP
GGGAFTGGQDGDGGGTGWLGGGTELSKIV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf
IPR015940UBA