Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10242.216.1 vs. uniprot
Match:
A0A6H5LQ87_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ87_9PHAE)
HSP 1 Score: 153 bits (386), Expect = 1.830e-41
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1
Query: 19 SRYAKETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVMILIFPLTP 246
SRYAKETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFV+ILIFPLTP
Sbjct: 647 SRYAKETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVVILIFPLTP 722
BLAST of mRNA_E-siliculosus-1a_F_contig10242.216.1 vs. uniprot
Match:
D8LP03_ECTSI (LETM1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP03_ECTSI)
HSP 1 Score: 148 bits (373), Expect = 4.550e-40
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1
Query: 19 SRYAKETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVMILIFPLTP 246
SRYAKETYDKIKSG+DFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFV+ILI PL+P
Sbjct: 464 SRYAKETYDKIKSGLDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVIILIIPLSP 539
BLAST of mRNA_E-siliculosus-1a_F_contig10242.216.1 vs. uniprot
Match:
A0A836CA55_9STRA (LETM1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA55_9STRA)
HSP 1 Score: 99.4 bits (246), Expect = 2.060e-23
Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 19 SRYAKETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVMILIFPLTP 246
+RY +ET +K++S +DFY TGTK+LG D+ YAL LV KA+QG L PREVRTLRR+ KD +T IP ++ILI PL+P
Sbjct: 156 ARYVRETVEKLRSALDFYVTGTKLLGQDIQYALALVGKAIQGYTLKPREVRTLRRSGKDLLTLIPTIIILILPLSP 231
BLAST of mRNA_E-siliculosus-1a_F_contig10242.216.1 vs. uniprot
Match:
A0A7S2SGM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGM0_9STRA)
HSP 1 Score: 92.0 bits (227), Expect = 2.690e-20
Identity = 41/69 (59.42%), Postives = 58/69 (84.06%), Query Frame = 1
Query: 40 YDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVMILIFPLTP 246
+ K+++G+ FY TGT++LG+D+ YA++L+ KAVQG+ L PRE RTLRRTAKD VT +PFV+IL+ PL+P
Sbjct: 242 WSKLQAGLSFYTTGTRLLGDDLNYAVSLLGKAVQGTTLAPREARTLRRTAKDLVTLVPFVIILLIPLSP 310
BLAST of mRNA_E-siliculosus-1a_F_contig10242.216.1 vs. uniprot
Match:
A0A7S2X822_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2X822_9EUKA)
HSP 1 Score: 86.7 bits (213), Expect = 1.360e-19
Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 31 KETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVMILIFPLTP 246
K+T K+K + FY GTK+LGND+ YAL L+++A+ G L PRE R L+RTAKD +T +PF +IL+ PLTP
Sbjct: 62 KDTVTKLKMALSFYVLGTKLLGNDIQYALWLIARAIDGDTLKPREARMLQRTAKDLLTLLPFTIILLIPLTP 133
BLAST of mRNA_E-siliculosus-1a_F_contig10242.216.1 vs. uniprot
Match:
A0A7S3KWU1_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWU1_9STRA)
HSP 1 Score: 89.4 bits (220), Expect = 5.730e-19
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 1
Query: 22 RYAKETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVMILIFPLTP 246
R+ E D+ K G+ FY G ++L NDV + L LVS+A QG L PREVRT+RRT KD +TFIPFV+ILI PLTP
Sbjct: 485 RWLAELVDQTKKGLAFYVKGVRLLWNDVAFCLNLVSRAAQGYTLKPREVRTIRRTFKDILTFIPFVIILIIPLTP 559
BLAST of mRNA_E-siliculosus-1a_F_contig10242.216.1 vs. uniprot
Match:
A0A0D2M6A9_9CHLO (LETM1 domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2M6A9_9CHLO)
HSP 1 Score: 85.5 bits (210), Expect = 1.710e-18
Identity = 44/73 (60.27%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 28 AKETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVMILIFPLTP 246
AKE DK+ GV F G ++LG+DVG A L SKA G IL PREV LRRTA+D +TFIPF++ILI PLTP
Sbjct: 20 AKEGADKVGEGVGFLTRGVRLLGSDVGNAGRLFSKAALGGILKPREVTALRRTARDLLTFIPFIIILIIPLTP 92
BLAST of mRNA_E-siliculosus-1a_F_contig10242.216.1 vs. uniprot
Match:
A0A1Z5JMY9_FISSO (LETM1 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMY9_FISSO)
HSP 1 Score: 87.8 bits (216), Expect = 2.000e-18
Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 LCGRGESRYAKETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVMILIFPLTP 246
L G R++ + DK K G+ FY G ++ ND Y L L+++AVQG L PREVRTLRRT KD +TFIPFV+ILI PL+P
Sbjct: 501 LDGESIKRWSIDLLDKTKKGLAFYVKGVRLFWNDNVYCLRLINRAVQGYTLEPREVRTLRRTFKDIITFIPFVIILIIPLSP 582
BLAST of mRNA_E-siliculosus-1a_F_contig10242.216.1 vs. uniprot
Match:
A0A5J4Z2D7_PORPP (LETM1 and EF-hand domain-containing protein anon-60Da, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2D7_PORPP)
HSP 1 Score: 87.4 bits (215), Expect = 2.730e-18
Identity = 40/71 (56.34%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 34 ETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVMILIFPLTP 246
ET K + GV+FYW G +++G D+ YA+ LV KA+ G+ L+PREVRTLRRT +D +T IPF +ILI PL+P
Sbjct: 539 ETVTKGREGVEFYWRGFRLIGGDLRYAVRLVRKAILGTTLSPREVRTLRRTGRDVLTLIPFTIILIIPLSP 609
BLAST of mRNA_E-siliculosus-1a_F_contig10242.216.1 vs. uniprot
Match:
A0A7S0B253_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B253_9STRA)
HSP 1 Score: 83.2 bits (204), Expect = 2.590e-17
Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 22 RYAKETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVMILIFPLTP 246
R+ + +K K+G+ FY G ++L ND Y+L L+ +A+QG L PREVRTLRR+ KD +TFIPFV+ILI PL+P
Sbjct: 127 RFLADLLEKTKTGLLFYVKGVELLWNDAIYSLRLIGRALQGYTLQPREVRTLRRSFKDIITFIPFVIILIIPLSP 201
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10242.216.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.83e-41 / Id = 98.68 Expect = 4.55e-40 / Id = 94.74 Expect = 2.06e-23 / Id = 60.53 Expect = 2.69e-20 / Id = 59.42 Expect = 1.36e-19 / Id = 54.17 Expect = 5.73e-19 / Id = 58.67 Expect = 1.71e-18 / Id = 60.27 Expect = 2.00e-18 / Id = 53.66 Expect = 2.73e-18 / Id = 56.34 Expect = 2.59e-17 / Id = 53.33 Sequence A0A6H5LQ87_9PHAE D8LP03_ECTSI A0A836CA55_9STRA A0A7S2SGM0_9STRA A0A7S2X822_9EUKA A0A7S3KWU1_9STRA A0A0D2M6A9_9CHLO A0A1Z5JMY9_FISSO A0A5J4Z2D7_PORPP A0A7S0B253_9STRA Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10242.216.1
>prot_E-siliculosus-1a_F_contig10242.216.1 ID=prot_E-siliculosus-1a_F_contig10242.216.1|Name=mRNA_E-siliculosus-1a_F_contig10242.216.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=82bp
LCGRGESRYAKETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSI back to top mRNA from alignment at E-siliculosus-1a_F_contig10242:1398..2295+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10242.216.1 ID=mRNA_E-siliculosus-1a_F_contig10242.216.1|Name=mRNA_E-siliculosus-1a_F_contig10242.216.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=898bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10242:1398..2295+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)TTGTGTGGGCGTGGGGAGAGCAGATACGCGAAAGAGACGTACGACAAGAT
CAAGAGCGGGGTGGACTTCTACTGGACCGGTACCAAGATCCTCGGTAACG
ACGTCGGGTACGCCCTCACGCTCGTCTCCAAGGCCGTGCAG GTACATAGC
GGTGTCGATAGCGGTAGCAGTAGCGGTCGGGGCTCGCGTACGGTGGAAGG
AAGGTACACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGTAGATGGTT
GCTGTGTCGGTAGCGGTCCGTGTACGGTGGAAGGAGGCGCCTATCGCATC
CGATCAAGTCTAAGGTGTAACGTGTACGATGCCGGCGAGGTGGCTTGGAA
CAGATTATCCGGTCGATGATGCATGCACCTGCTGCTGCGTCGCTGGATGT
ACTGTTTATCGAAAACTCCTCGTCTAGCAAATTACAGCCTCAGCGGCATT
TGTACATGGTCGCCCGCAGTGTTGTGCGTAGACGAGGCAACACGTTGGGC
CAGTACCTCGTGGGTTGTCGACTTTCGTTTCAAAGGCCGTAGGAGGTTAT
TCTTTGTACGGTTCCTTTTGAGCCGCGGACAACATGGAAACCGGAACCTT
TTTTTTTTTTTTTTCATGCTGGCAGGCCGGAAGCGCGTTAGCGTCGTGAG
CACCCTGTGGTGGTCCTCCCGTTACGGAAACCCCTGGCGTTTCCACGCCT
ACTTCTCCCCCGGTCTCACTCACTGTCTCACTTTCATTTGTGTGTTTTTA
CACCCTGGCTGGCGGTTTCTTCCTTGTGTCCCTGTGGCAACAGGGATCCA
TCCTGAATCCCCGCGAGGTTCGAACGCTACGCCGGACTGCCAAGGATTGC
GTCACGTTCATCCCGTTCGTCATGATCCTCATCTTCCCTCTTACGCCC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10242:1398..2295+
>mRNA_E-siliculosus-1a_F_contig10242.216.1 ID=mRNA_E-siliculosus-1a_F_contig10242.216.1|Name=mRNA_E-siliculosus-1a_F_contig10242.216.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=492bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10242:1398..2295+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top