mRNA_E-siliculosus-1a_F_contig1024.213.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1024.213.1 vs. uniprot
Match: A0A6H5JHV3_9PHAE (GT1 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHV3_9PHAE) HSP 1 Score: 873 bits (2255), Expect = 0.000e+0 Identity = 438/459 (95.42%), Postives = 446/459 (97.17%), Query Frame = 3 Query: 105 AGHEVTFVTSQPMVARIQGMCRDPRVAVLGLQDELVPESDHFLLGMQPHVKKHPVWYAEEKMTPSLVALIKGMPRPPDMMISDHLTWAGANAARIVGVKHACHVAWPLFMLEQCGFLPARSLSGVLGAAARALRSSRLAPGFLKPPGPPRAMLDRVRQQCLGVEEGSAGLVLVNSFGIEPPRALPPCLKVIGRGHLPETVEALEEHPELKTFLDSNDAVVYVTFGSRVTPPPSLVRTVAEGLVTGGWAVVWSLKEADASHLPPAALASGRFFVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNAAIAEAAGFAVRPRPLSRKATDLLKFWKRRGDPEYAPAAIHDAVLKILRDPSLAEGARRAKRAALAAGYGRVAVDAVESTCLYGTDNLSAGNGGIRNAAGATQTLRGIVGGVVVGAVLSGLLAVKLSHGGCRRTR 1481
A +VTFVTSQPMVARIQGMCRDPRVAVLGLQDELVPESDHFLLGMQPHVKKHPVWYAEEKMTPSLVAL+KGMPR PDM+ISDHLTWAGANAARIVGVKHACHVAWPLFMLEQCGFLPARSLS VLGAAARALRSSRLAP FLKPPGPPRAMLDRVRQQCLGVEEGSAGLVLVNSFGIEPPRALPPCLKVIGRGHLPETVEALEEHPELKTFLDSNDAVVYVTFGSRVTPPPSLVRTVAEGLVTGGWAVVWSLKEADASHLPPAALASGRFFVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNAAIAEAAGFAVRPRPLSR+ATD LKFW+RRGDPEYAPAAI+DAVLKILRDPSLAEGA RAKRAALAAGYGRVAVDAVESTCL+G DNL A NGGI NAAGATQTLRGIVGGVV GAVLSGLLAV+LSHGG RRTR
Sbjct: 17 ASTQVTFVTSQPMVARIQGMCRDPRVAVLGLQDELVPESDHFLLGMQPHVKKHPVWYAEEKMTPSLVALVKGMPRAPDMIISDHLTWAGANAARIVGVKHACHVAWPLFMLEQCGFLPARSLSSVLGAAARALRSSRLAPAFLKPPGPPRAMLDRVRQQCLGVEEGSAGLVLVNSFGIEPPRALPPCLKVIGRGHLPETVEALEEHPELKTFLDSNDAVVYVTFGSRVTPPPSLVRTVAEGLVTGGWAVVWSLKEADASHLPPAALASGRFFVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNAAIAEAAGFAVRPRPLSRRATDFLKFWQRRGDPEYAPAAIYDAVLKILRDPSLAEGAGRAKRAALAAGYGRVAVDAVESTCLFGADNLPAENGGIGNAAGATQTLRGIVGGVVFGAVLSGLLAVRLSHGGSRRTR 475
BLAST of mRNA_E-siliculosus-1a_F_contig1024.213.1 vs. uniprot
Match: A0A443NA18_9MAGN (Glycosyltransferase n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NA18_9MAGN) HSP 1 Score: 89.4 bits (220), Expect = 2.910e-15 Identity = 68/194 (35.05%), Postives = 95/194 (48.97%), Query Frame = 3 Query: 585 LGVEEGSAGLVLVNSF-GIEPPRALPP-------CLKVIGRGHL----PETVEALEEHP---ELKTFLDSNDAVVYVTFGSRVTPPPSLVRTVAEGLVTGGWAVVWSLKEADASHLPPAAL--ASGRFFVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNAA-IAEAAGFAVR 1112
+G E A V++N+ G++P L CL V L P++ L+ H L +F DS +V YV+FG+ ++PPPS + +AEGL G +WSL++ LP L GR V PW PQ L H V VTHCG L E AV VP++ PF DQ +N +++ G A+R
Sbjct: 209 MGQESPRAAAVVINTVEGLDPTTVLDDLRASFQKCLPVGPVSLLNKARPDSEPELDPHSCISWLDSFSDSPASVAYVSFGTVMSPPPSELAELAEGLEASGAHFLWSLRDKHRESLPAGFLDRTKGRGHVVPWAPQTRVLGHVVVGAFVTHCGWNSLIESAVAGVPMICRPFF--GDQRINGRMLSDVLGVAIR 400
BLAST of mRNA_E-siliculosus-1a_F_contig1024.213.1 vs. uniprot
Match: E1ZHB4_CHLVA (Glycosyltransferase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZHB4_CHLVA) HSP 1 Score: 88.6 bits (218), Expect = 5.780e-15 Identity = 106/397 (26.70%), Postives = 160/397 (40.30%), Query Frame = 3 Query: 45 CVPCYGHAKPLVLLAEHLAEAGHEVTFVTSQPMVARIQGM--------CRDPRVAVLGLQDELVPESDHFLLGMQPHVKKHPVWYA--EEKMTPSLVALIKGMPRPPDMMISDHLTWAGANAARIVGVKHACHVAWPL-FMLEQCGF--------LPARSLSGVLGAAARALRSSRLAPGFLKPPGPPRAMLDRVRQQCLGVEEGSAGLVLVNSFGIEPPRALPPCLKVIGRGHLPETVEAL-----------------------EEHPELKTFL----DSNDAVVYVTFGSRVTPPPSLVRTVAEGLVTG-GWAVVWSLKEADASHLPP-----AALASGRFFVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNA 1079
C+P GH +P+ +A + G +V F +P A ++ M + + + +G E V ++ + + V K +A EE + P L A + ++SD T A +AA + G+ PL + L G +P VL A L+ + P LK G + R + E + +S +PP +P + ++G ET L ++ E+ FL D+ + VVYV GS VTP +LV +A G +W+L++A + LPP A G+ V W Q A LAHP VK+ VTH G+G L E P+V LPF ADQ VNA
Sbjct: 8 CLPLEGHLRPVTNVAAAVQRLGVDVEFAALEPSRATVESMGVPFVSLGSAERKTSKMGFA-ERVGDTSTPPVPLDQFVDKAGANFAGWEEAVYPLLQAHMDRAGGRYAAIVSDQATMAAHDAAAVAGLPLVSLYQLPLSYSLVMGGHNEYNMPRSVPVELPCCVLPEAMTWLQYAFTNPA-LKRRGAAQITAAYGRHRAAARERLGLPPLPPSSGPFQPPPGIPRSITIVGGMMELETERPLPPGWHMSGPQVLPPVTAPPVLDGDKDAEVAAFLRAAQDAGEPVVYVALGSLVTPHEALVHAMAAAFQAAPGARFLWALRQASHAFLPPDLAPPAGAGGGKVLVVSWAAQTAVLAHPAVKLFVTHGGLGSLSEGLAAGKPLVALPFF--ADQHVNA 400
BLAST of mRNA_E-siliculosus-1a_F_contig1024.213.1 vs. uniprot
Match: A0A1W0X030_HYPDU (UDP-glucuronosyltransferase n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0X030_HYPDU) HSP 1 Score: 83.2 bits (204), Expect = 2.550e-13 Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = 3 Query: 714 EEHPELKTFLDSNDA--VVYVTFGSRVTPPPSLVRTVAEGLVTGGWAVVWSLKEADASHLPPAALAS-------GRFFVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNA 1079
EE +++ +LD+ D+ V+Y++FGS P P + + E L+ VVWSLK+ +LP + G F + PW PQ A LAHP VKV ++HCG E VP+V P + ADQ +NA
Sbjct: 238 EEKDDVQKWLDTQDSRSVIYISFGSIAVPKPDEIMAIGEALLQLTSPVVWSLKKEYYVYLPVDIQSELNKEGCKGNFVIVPWAPQKAVLAHPAVKVFISHCGWNSTLEALSYGVPVVCWP--MFADQLLNA 366
BLAST of mRNA_E-siliculosus-1a_F_contig1024.213.1 vs. uniprot
Match: A0A182N956_9DIPT (UDP-glucuronosyltransferase n=1 Tax=Anopheles dirus TaxID=7168 RepID=A0A182N956_9DIPT) HSP 1 Score: 82.4 bits (202), Expect = 6.360e-13 Identity = 66/193 (34.20%), Postives = 96/193 (49.74%), Query Frame = 3 Query: 540 PGPPRAMLDRVRQQCLGVEEGSAGLVLVNS-FGIEPPRALPPCLKVIGRGHLPETVEALEEHPELKTFLDSND-AVVYVTFGSRVTPP---PSLVRTVAEGLVTGGWAVVWSLKEADASHLPPAALASGRFFVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNAAIAEAAGF 1103
PG R+M + R+ LVL+NS F + PR P + +G H+ V L E ++KTF++S+D V+Y + G V P P T+ + L ++W D LP + +F VR WLPQ LAHP V++ +TH G+ E + VPIV +P + DQ +NAA AE AG+
Sbjct: 223 PGATRSMEEMRRR--------GVALVLINSHFSMSYPRPYTPNMVEVGGFHVNREVNPLPE--DIKTFIESSDHGVIYFSLGGNVKPSKMDPRKRDTLVKVLSDMRERIIWKW---DDETLP---VDKHKFLVRRWLPQDDILAHPRVRLFITHGGLLSCTEAIYHGVPIVAIP--IFGDQSLNAARAEQAGW 397
BLAST of mRNA_E-siliculosus-1a_F_contig1024.213.1 vs. uniprot
Match: A0A6P8I1Z0_ACTTE (UDP-glucuronosyltransferase 1-2-like isoform X1 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I1Z0_ACTTE) HSP 1 Score: 81.6 bits (200), Expect = 1.110e-12 Identity = 65/217 (29.95%), Postives = 100/217 (46.08%), Query Frame = 3 Query: 615 VLVNSFGIEPPRALPPCLKVIGRGHLPETVEALEEHPELKTFLDSN--DAVVYVTFGSRVTP--PPSLVRTVAEGLVTGGWAVVWSLKEADASHLPPAALASGRFFVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNAAIAEAAGFAVRPRPLSRKATDLLKFWKRRGDPEYAPAAIHDAVLKILRDPSLAEGARR 1253
+ + F ++ P +PP K+IG ++ + V+ L P+L+ +DS+ D + V+FGS V V +A+ VVW L+ S L P A WLPQ LAHP ++V V+H G LYE A VP+V LP L DQP NA + E G + + A D+ ++ + ++++ PS E A+R
Sbjct: 248 LFLGDFAVDYPHPIPPSYKLIGPLNI-QPVKPLP--PDLQQLIDSSGDDGFIIVSFGSNVASVLDKDKVDIMADAFGRLKQKVVWRLQGYIPSSLSPNIKAVD------WLPQNDLLAHPKIRVFVSHVGQNSLYETAYRGVPVVSLP--LFGDQPDNALLVEERGMGLSLDYQTLTADDM-----------------YNTIQRVIQQPSFKENAQR 436
BLAST of mRNA_E-siliculosus-1a_F_contig1024.213.1 vs. uniprot
Match: A0A137P216_CONC2 (Glycosyltransferase family 1 protein (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P216_CONC2) HSP 1 Score: 77.0 bits (188), Expect = 1.180e-12 Identity = 60/187 (32.09%), Postives = 87/187 (46.52%), Query Frame = 3 Query: 618 LVNSF-GIEPPRALPPCLKVIG---RGHLPETVEALEEHPELKTFLDSNDAVVYVTFGSRVTPPPSLV--------RTVAEGLVTGGWAVVWSLKEADASHLPP-----------AALASG---RFFVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNAAIAEAAG 1100
+ NS+ G+E R+LP + IG G P PEL+TF+D+++ V+YV FGS V P L+ R + +G++ G VVW L D P A + G + + W PQ + L HP K+ ++H G+ +YE A VPI+ LPF DQP N + G
Sbjct: 1 IANSYIGLENARSLPTHIHPIGPILSGDTPPL------SPELQTFMDTHNKVLYVAFGSLVKPSQDLLTKLLRHFQRAINQGILDG---VVWGLPNTDFKTFPKTFKVDIAEYTTAQIVEGTQDKIKILKWAPQQSILHHPSTKLFLSHGGLDSIYESANAGVPILVLPFL--GDQPRNGVLVSENG 176
BLAST of mRNA_E-siliculosus-1a_F_contig1024.213.1 vs. uniprot
Match: UPI00053C42D3 (UDP-glycosyltransferase 78D2-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C42D3) HSP 1 Score: 80.9 bits (198), Expect = 1.530e-12 Identity = 49/138 (35.51%), Postives = 68/138 (49.28%), Query Frame = 3 Query: 693 PETVEALEEHPELKTFLDSN--DAVVYVTFGSRVTPPPSLVRTVAEGLVTGGWAVVWSLKEADASHLPPAALASGRF--FVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNAAIAEA 1094
P V L + +LD+ +V Y++FG+ +TPPPS ++ +AEGL +WSLK+ D +HLP R V PW PQ L H V VTHCG + E +P++ PF DQ +N EA
Sbjct: 252 PPKVSTLNDTYNCLAWLDNQALGSVAYISFGTVMTPPPSELQAMAEGLEASRVPFIWSLKDKDRAHLPKGFQDRTREQGLVVPWAPQVKVLEHRATGVFVTHCGWNSVLESVAGGIPMICRPFF--GDQRLNGRAVEA 387
BLAST of mRNA_E-siliculosus-1a_F_contig1024.213.1 vs. uniprot
Match: A0A061SK64_9CHLO (Glucuronosyltransferase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SK64_9CHLO) HSP 1 Score: 81.3 bits (199), Expect = 1.550e-12 Identity = 72/239 (30.13%), Postives = 106/239 (44.35%), Query Frame = 3 Query: 612 LVLVNSF-GIEPPRALPPCLKVIGRGHLPETVEALEEHP-ELKTFLDSNDA---VVYVTFGSRVTPPPSLVRTVAEGLVTGGWAVVWSLKEADASHLPPAALASGRFFVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNAAIAEAAGFAVRPRPLSRKATDLLKFWKRRGDPEYAPAAIHDAVLKILRDPSLAEGARRAKRAALAAGYGRVAVDAVES 1313
L L NS G++ P+ PP L+ G ++ EE P E+ +FL+S A VVY+++G+ V +V + + L V+W+L + LP V W+P ALAHP V+V V+HCG+ + E VPIV P L P+ + +A P+P S W R+ D +L +L +PS + A KR G R A D VE+
Sbjct: 261 LWLFNSVPGLDYPQPFPPLLQYTG---CLSDIDKAEEFPAEVLSFLESVPADKPVVYISYGTFVALSRDVVHHIVDTLAXENLYVLWALPKPQQVGLPXQ--LPSNVXVHNWIPTTRALAHPKVRVFVSHCGVNSVLESLAQGVPIVGYP-QLGDQLPLCSRVAYLGAGITAPKPQS---------WLRKED-----------ILNVLENPSYTQHAEAFKRLFKLFGGVRRAADLVEA 473
BLAST of mRNA_E-siliculosus-1a_F_contig1024.213.1 vs. uniprot
Match: A0A345HZ32_9ACTN (Glycosyltransferase n=2 Tax=Streptomyces paludis TaxID=2282738 RepID=A0A345HZ32_9ACTN) HSP 1 Score: 80.9 bits (198), Expect = 1.640e-12 Identity = 90/300 (30.00%), Postives = 130/300 (43.33%), Query Frame = 3 Query: 333 PDMMISDHLTWAGANAARIVGVKHACHV-AWPLFML-------EQCGFLPAR-SLSGVLGAAARALRSSRLAPGFLKPPGPPRAMLDRVRQQCLGVEEGS---------AGLVLVNS-FGIEPPRALPPCLKVIGRGHLPETVEALEEHPELKTFLDSNDAVVYVTFGSRVTPPPSLVRTVAEGLVTGGWA--VVWSLKEADASHLPPAALASGRFFVRPWLP-QGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNAAIAEAAGFAV-RPRP-----LSRKATDLL 1148
P +M+ D +T A +AA G+ A + A P F +LP R + L A +RSS + P + V+++ LG++ S A LVL +S FG+E +PP ++G LPE E P+L +LD +VVY+ FG+ +R + + G A +W L + LPP G V W+P Q + LAHPHV+V VTH G G +E P++ LP L + A+ G AV RP L+ K T LL
Sbjct: 131 PALMVVDTMTLAPLDAAMTRGIPFAVTLPAMPSFGFTLPWLYPSPIAYLPRRMNARQHLSNAVFKMRSSLTL--LTRTP----TVAFAVKRRILGIKNASGSHDAYYRAAQLVLTSSVFGLEYAFPVPPHTHLVG-AFLPENPPDRIEDPDLLEWLDRAASVVYLGFGTLSRLSRDQIRALLTAVQRLGPAHQFLWKLSKEQQDLLPPPESRPGNLRVESWIPSQLSVLAHPHVRVFVTHGGSNGFHESVHYGKPVLVLPAWLDCYAIAHRAVDSGVGLAVGRPAEVTGDELTAKLTRLL 423 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1024.213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1024.213.1 >prot_E-siliculosus-1a_F_contig1024.213.1 ID=prot_E-siliculosus-1a_F_contig1024.213.1|Name=mRNA_E-siliculosus-1a_F_contig1024.213.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=491bp MACPPLSLVLCCVPCYGHAKPLVLLAEHLAEAGHEVTFVTSQPMVARIQGback to top mRNA from alignment at E-siliculosus-1a_F_contig1024:5749..10947+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1024.213.1 ID=mRNA_E-siliculosus-1a_F_contig1024.213.1|Name=mRNA_E-siliculosus-1a_F_contig1024.213.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5199bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1024:5749..10947+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1024:5749..10947+ >mRNA_E-siliculosus-1a_F_contig1024.213.1 ID=mRNA_E-siliculosus-1a_F_contig1024.213.1|Name=mRNA_E-siliculosus-1a_F_contig1024.213.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2946bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1024:5749..10947+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |