prot_E-siliculosus-1a_F_contig1353.2109.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1353.2109.1
Unique Nameprot_E-siliculosus-1a_F_contig1353.2109.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length518
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1353.2109.1 vs. uniprot
Match: D8LKA2_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKA2_ECTSI)

HSP 1 Score: 627 bits (1617), Expect = 2.370e-220
Identity = 482/519 (92.87%), Postives = 487/519 (93.83%), Query Frame = 0
Query:    1 MAWGAPRGVDDLVAKLNDNSTASTMCILSTRKFGPSEAAALSAALSGNTSLTELLASGHPLEVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGLLVLDLEYKSIASGEGLRTLLETHPTLADLRLGRNQLGEAGMKSLSAGLSLSSTLLRLDLSGNQLNAAAAEALGRSLSTHRPTAIGNQAGTSAVGXXXXXXXXXXXXXXXXXXLEFLDVSRNPLGDEGGATLFRALATSPTLTGLVLAEAKLGRLAAAALAESLVPPPASPLPGGGGPSGPAETDSG--AXXXXXXXXXXPANGGGLQKLQALDVSKNELGTVGAAEVAGALSRGGAPRLETLSMAYNDVGDDGAAALGKAAXXXXXXXXXXXXXXXXXXXXXXXXXXGLREAKLFHNACKDEGVPLVLEALLAGGTLQTLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDERAEEAVRRSQGSNPALDIAFRRGGEAMEGSGAPPGVGIGGGTAGGPGAAASWQTQ 517
            MAWGAPRGVDDL+AKLNDNSTASTMCILSTRKFGPSEAAA SAALSGNTSLTELLASGHPLEVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGLLVLDLEYKSIASGEGLRTLLETHPTLADLRLGRNQLGEAGMKSLSAGLSL+STLLRLD+SGNQLNAAAAEALGR+L THRP AIGNQ GTSAVG   XXXXXXXXXXXXXXXLEFLDVSRNPLGDEGGA LFRALATSPTLTGLVLAEAKLG LAAAALAE+LVPPPASPLPGGGGPSGPAE DSG      XXXXXXX  NGGGLQKLQALDVSKNELGT G AEVAGALSRGGAPRLETLSMAYNDVGDDGAAA     XXXXXXXXXXXXXXXXXXXXXXXXXX LREAKLFHNACKDEGVPLVLEALLAGGTLQTLD      XXXXXXXXXXXXXXXXXXXXXXXXXXSNDERAEEAVRRSQGSNPALDIAFRRGGEAMEGSGAPPGVGIGGGTAGGPGAAASWQTQ
Sbjct:    1 MAWGAPRGVDDLIAKLNDNSTASTMCILSTRKFGPSEAAAFSAALSGNTSLTELLASGHPLEVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGLLVLDLEYKSIASGEGLRTLLETHPTLADLRLGRNQLGEAGMKSLSAGLSLNSTLLRLDVSGNQLNAAAAEALGRALCTHRPAAIGNQTGTSAVGGSDXXXXXXXXXXXXXXXLEFLDVSRNPLGDEGGAALFRALATSPTLTGLVLAEAKLGPLAAAALAEALVPPPASPLPGGGGPSGPAEPDSGEMTPLPXXXXXXXXXNGGGLQKLQALDVSKNELGTGGGAEVAGALSRGGAPRLETLSMAYNDVGDDGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREAKLFHNACKDEGVPLVLEALLAGGTLQTLDLGANGLXXXXXXXXXXXXXXXXXXXXXXXXXXSNDERAEEAVRRSQGSNPALDIAFRRGGEAMEGSGAPPGVGIGGGTAGGPGAAASWQTQ 519          
BLAST of mRNA_E-siliculosus-1a_F_contig1353.2109.1 vs. uniprot
Match: A0A835YR55_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR55_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.340e-19
Identity = 100/210 (47.62%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    1 MAWGAPRGVDDLVAKLNDNSTASTMCILSTRKFGPSEAAALSAALSGNTSLTELLASGHPLEVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-GLLVLDLEYKSIASGEGLRTLLETHPTLADLRLGRNQLGEAGMKSLSAGL--------------------------SLSSTLLRLDLSGNQLNAAAAEALGRSL 183
            MAWGAP+GVDDL+ KL  ++  +++ IL  R+FG +EA   +AALS N++LTEL ASGH +   G   XXXXXXXXXXXXXXXXXXXXXXXXX           + GL+ LDLEYKS+  G+ +  LL+ H  L DLRLGRN++G  G+ +L  GL                          +L STL  LDLSGN L  +A   L  SL
Sbjct:    1 MAWGAPKGVDDLLVKLRTDANLTSLVILRNRRFGVTEATQFAAALSSNSTLTELFASGHAVGEEGAAAXXXXXXXXXXXXXXXXXXXXXXXXXVTALVHGGLHKNTGLVKLDLEYKSVTRGDHIGHLLQHHTALQDLRLGRNRIGNDGLIALCQGLCASTXXXXXXXXXXXXXXXXXXXXTQTLPSTLTGLDLSGNALCGSAGHTLFTSL 210          
BLAST of mRNA_E-siliculosus-1a_F_contig1353.2109.1 vs. uniprot
Match: A0A7S2SI57_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SI57_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.160e-11
Identity = 78/185 (42.16%), Postives = 98/185 (52.97%), Query Frame = 0
Query:    1 MAWGAPRGVDDLVAKLNDNSTASTMCILSTRKFGPSEAAALSAALSGNTSLTELLASGHPLEVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGLLVLDLEYKSIASG--EGLRTLLETHPTLADLRLGRNQLGEAGMKSLSAGLSLSSTLLRLDLSGNQLNAAAAEALGRSL 183
            M WG  +GVDDLV KL+ N T  TM ILS R FG  E  A   AL+ NTSL ELL SGH      XXXXXXXXXXXXXXXXX                        L  ++LEYKS+  G  E + + L+    L  + LGRN L +  ++ LS G+  S ++  + L  N L+A   + +G SL
Sbjct:    1 MVWGKKQGVDDLVQKLSRNETGETMLILSNRSFGDKETIAFCKALATNTSLKELLCSGHXXXXXXXXXXXXXXXXXXXXXXXGLGNSNFGDKGVAALFANWENST-LTHIELEYKSLGQGAMEAISSALQRENALESILLGRNGLNDTHVEVLSKGIQASPSINHICLKSNVLSATGCKHVGDSL 184          
BLAST of mRNA_E-siliculosus-1a_F_contig1353.2109.1 vs. uniprot
Match: A0A3M6VKV4_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKV4_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.910e-8
Identity = 75/160 (46.88%), Postives = 95/160 (59.38%), Query Frame = 0
Query:    1 MAWGAPRGVDDLVAKLNDNSTASTMCILSTRKFGPSEAAALSAALSGNTSLTELLASGHPL--EVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGLLVLDLEYKSIASG--EGLRTLLETHPTLADLRLGRNQLGEAGMKSLSAGLS 156
            MAWG   GVDDL+ KL +  TA+++ ++STR    S+   L+ ++S NT L EL  SGH L  +          XXXXXXXXXXXXXXXXXXXXXXX          GLL  DLE KS+       +  LL+T+  L  L L RNQ+G+ GM+ L+ GLS
Sbjct:    1 MAWGKKTGVDDLLQKLVNPKTATSLYVMSTRCMSDSDFVRLAGSISSNTMLQELYVSGHELGPQSVQAFADCLAXXXXXXXXXXXXXXXXXXXXXXXCAGLARNPQSGLLNWDLELKSLGVDGVSAIAELLKTNKVLTTLTLSRNQIGDEGMEKLAKGLS 160          
BLAST of mRNA_E-siliculosus-1a_F_contig1353.2109.1 vs. uniprot
Match: M4C052_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C052_HYAAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.070e-7
Identity = 78/282 (27.66%), Postives = 113/282 (40.07%), Query Frame = 0
Query:    1 MAWGAPRGVDDLVAKLNDNSTASTMCILSTRKFGPSEAAALSAALSGNTSLTELLASGHPLEVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--HGLLVLDLEYKS--IASGEGLRTLLETHPTLADLRLGRNQLGEAGMKSLSAGLSLSS-------TLLRLDLSGNQLNAAAAEALGRSLSTHRPTAIGNQAGTSAVGXXXXXXXXXXXXXXXXXXLEFLDVSRNPLGDEGGATLFRALATSPTLTGLVLAEAKLGRLAAAALAESLV 271
            MAWG   GVDDL+ KL D  TA+++ ++S R    S+   L+ A+S NT L EL  SGH L   G                                           L V DLE+KS  +     +  LL+T+ TL  + L RN + + G++ ++ GLS +         L  + +SG  L+  AA    ++ S                                   +  L +S N LGD   +  F ALAT+ ++  L+L E KL    AAALA + V
Sbjct:    1 MAWGKKTGVDDLLQKLADPLTATSLYVMSIRSLSDSDVVTLAKAISTNTLLRELYMSGHELGPLGLNAFADCLATNMTLQHLCLGSETLGDNAVKVLCTGLARNAQSKLRVWDLEFKSLNVDGASAIAELLKTNKTLTTITLSRNPIHDEGVEKVANGLSANPQSQVAELNLTDIGISGTGLDHLAALVASKTCS-----------------------------------VTTLQLSFNSLGD-ATSPFFDALATNTSVEKLLLKECKLTDQHAAALASASV 246          
BLAST of mRNA_E-siliculosus-1a_F_contig1353.2109.1 vs. uniprot
Match: A0A2P6VFQ9_9CHLO (Putative leucine rich repeat n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFQ9_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 2.540e-6
Identity = 31/65 (47.69%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    1 MAWGAPRGVDDLVAKL-NDNSTASTMCILSTRKFGPSEAAALSAALSGNTSLTELLASGHPLEVA 64
            MAWGA RGV+DL+ +L +D+   +++C+L  R+F  ++A A +AAL+ NTSL EL A+ HP+  A
Sbjct:    1 MAWGAKRGVEDLLERLRSDDPALTSLCLLRQRRFEEADAVAFAAALADNTSLRELTAAAHPVSAA 65          
BLAST of mRNA_E-siliculosus-1a_F_contig1353.2109.1 vs. uniprot
Match: A0A2R5GZM4_9STRA (NACHT, LRR and PYD domains-containing protein 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZM4_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.360e-6
Identity = 53/149 (35.57%), Postives = 65/149 (43.62%), Query Frame = 0
Query:    1 MAWGAPR-GVDDLVAKLNDNSTASTMCILSTRKFGPSEAAALSAALSGNTSLTELLASGHPLEVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGLLVLDLEYKSIASGEGL----RTLLETHPTLADLRLGRNQLG 144
            MAWG  R GVDDLVAKL  N T   + ++S RK   S   AL+ AL+ N+SL ELL SGH +                                             L  LDLE+KS+ +G G+      L +    L DLRLGRN LG
Sbjct:    1 MAWGQQRRGVDDLVAKLRANETGPALLVMSMRKVDESGLCALADALAENSSLEELLCSGHSVS-EDAAKRLGQALRQNSTLKRLSVGCAQFGDAELAALLDAWENSTLEALDLEFKSLTAG-GMPHLGSVLAQPSHALQDLRLGRNDLG 147          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1353.2109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LKA2_ECTSI2.370e-22092.87Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A835YR55_9STRA1.340e-1947.62Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
A0A7S2SI57_9STRA1.160e-1142.16Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A3M6VKV4_9STRA1.910e-846.88Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
M4C052_HYAAE1.070e-727.66Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A2P6VFQ9_9CHLO2.540e-647.69Putative leucine rich repeat n=1 Tax=Micractinium ... [more]
A0A2R5GZM4_9STRA3.360e-635.57NACHT, LRR and PYD domains-containing protein 3 n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 130..157
e-value: 1.3
score: 16.3
coord: 48..75
e-value: 35.0
score: 6.2
coord: 245..272
e-value: 160.0
score: 1.6
coord: 217..244
e-value: 13.0
score: 9.3
coord: 341..366
e-value: 5.5
score: 11.9
coord: 367..396
e-value: 1.7
score: 15.6
coord: 158..185
e-value: 0.13
score: 21.4
coord: 76..103
e-value: 8.4E-5
score: 32.0
coord: 311..338
e-value: 1.1
score: 16.9
coord: 419..446
e-value: 2.1
score: 14.9
NoneNo IPR availablePANTHERPTHR24107FAMILY NOT NAMEDcoord: 246..505
coord: 29..243
coord: 129..336
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 48..432
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 7..120
e-value: 4.5E-22
score: 80.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 292..480
e-value: 1.7E-28
score: 101.0
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 220..238
e-value: 0.034
score: 14.2
coord: 76..97
e-value: 2.4E-4
score: 20.9
coord: 370..387
e-value: 0.39
score: 10.9
coord: 312..331
e-value: 0.084
score: 13.0
coord: 342..362
e-value: 0.0029
score: 17.5
coord: 158..179
e-value: 0.029
score: 14.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1353contigE-siliculosus-1a_F_contig1353:17503..21272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1353.2109.1mRNA_E-siliculosus-1a_F_contig1353.2109.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1353 17459..21600 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1353.2109.1 ID=prot_E-siliculosus-1a_F_contig1353.2109.1|Name=mRNA_E-siliculosus-1a_F_contig1353.2109.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=518bp
MAWGAPRGVDDLVAKLNDNSTASTMCILSTRKFGPSEAAALSAALSGNTS
LTELLASGHPLEVAGATAFGQALSRNSTLRSLCVGDNDFGDEGVIALVEG
LKRNHGLLVLDLEYKSIASGEGLRTLLETHPTLADLRLGRNQLGEAGMKS
LSAGLSLSSTLLRLDLSGNQLNAAAAEALGRSLSTHRPTAIGNQAGTSAV
GGGDGGGGDGGGGSAPPPPLEFLDVSRNPLGDEGGATLFRALATSPTLTG
LVLAEAKLGRLAAAALAESLVPPPASPLPGGGGPSGPAETDSGATAPSPP
PPPLPANGGGLQKLQALDVSKNELGTVGAAEVAGALSRGGAPRLETLSMA
YNDVGDDGAAALGKAAGPRLAVLDLSGNALGGAGVGAVLAAPGLREAKLF
HNACKDEGVPLVLEALLAGGTLQTLDLGANGLTGAGFEMLLPGLAACSSL
QTLEVGANSNDERAEEAVRRSQGSNPALDIAFRRGGEAMEGSGAPPGVGI
GGGTAGGPGAAASWQTQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf