prot_E-siliculosus-1a_F_contig13504.2097.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13504.2097.1
Unique Nameprot_E-siliculosus-1a_F_contig13504.2097.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length125
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13504.2097.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 3.180e-16
Identity = 63/164 (38.41%), Postives = 70/164 (42.68%), Query Frame = 0
Query:    3 SVHFTIRHSDEVCFEQGAPRPVKSSKSPHALIEGFMYATVHKREELKPNDAEATTLEASSTKTEIDFSADGKSEEAXXXXXXXXXXXXXXXXXXXX------------------------------------------LLIDTGASENILDDRLIPGLKETMRE 124
            SVHFT RHSDE CFEQGA RP KSS +  AL      +  H        +   T  EASST+ EIDFSA+G+SEE                                                               LLIDTGASEN+LDD LIPGLKE MRE
Sbjct:  258 SVHFTTRHSDEECFEQGATRPKKSSNTGKAL--SACASCTHCFSTSNKTELAMTKQEASSTQAEIDFSAEGESEEGFMYAIVHKGEDLKPMATGATPLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLIDTGASENMLDDCLIPGLKEIMRE 419          
BLAST of mRNA_E-siliculosus-1a_F_contig13504.2097.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.160e-13
Identity = 53/122 (43.44%), Postives = 62/122 (50.82%), Query Frame = 0
Query:    3 SVHFTIRHSDEVCFEQGAPRPVKSSKSPHALIEGFMYATVHKREELKPNDAEATTLEASSTKTEIDFSADGKSEEAXXXXXXXXXXXXXXXXXXXXLLIDTGASENILDDRLIPGLKETMRE 124
            SV+ T R+SDE CFEQGA RP KSS +  AL       + H        ++     EAS+          G+SEEA                    LLIDTGASEN+LDDRLIPGLKE MRE
Sbjct:   52 SVYVTPRYSDEECFEQGATRPKKSSNTGKAL--SACVNSAHCSFTSNKTESAMKKKEASN----------GESEEALMYSTAHKGREFKPIAAGASLLIDTGASENMLDDRLIPGLKEIMRE 161          
BLAST of mRNA_E-siliculosus-1a_F_contig13504.2097.1 vs. uniprot
Match: A0A6H5JSB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB5_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 7.440e-13
Identity = 64/90 (71.11%), Postives = 66/90 (73.33%), Query Frame = 0
Query:   35 EGFMYATVHKREELKPNDAEATTLEASSTKTEIDFSADGKSEEAXXXXXXXXXXXXXXXXXXXXLLIDTGASENILDDRLIPGLKETMRE 124
            EGFMYATVHKR ELKPND EAT L                    XXXXXXXXXXXXXXXXXXXX L+DTGASEN+LDDRLIPGLKETMRE
Sbjct:  268 EGFMYATVHKRGELKPNDTEATMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVDTGASENMLDDRLIPGLKETMRE 357          
BLAST of mRNA_E-siliculosus-1a_F_contig13504.2097.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 9.740e-8
Identity = 40/118 (33.90%), Postives = 52/118 (44.07%), Query Frame = 0
Query:    3 SVHFTIRHSDEVCFEQGAPRPVKSSKSPHALIEGFMYATVHKREELKPNDAEATTLEASSTKTEIDFSADGKSEEAXXXXXXXXXXXXXXXXXXXXL----LIDTGASENILDDRLIP 116
            SVH T  HSDE C+ QGA RP ++ K+  A       +T  +    KP   E  T    + K EIDFS D  + +                          L+D+GASE + DDRLIP
Sbjct:  279 SVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHCSTQSRDTHAKPTTTETPTETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIP 396          
BLAST of mRNA_E-siliculosus-1a_F_contig13504.2097.1 vs. uniprot
Match: A0A6H5KPR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPR8_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.160e-6
Identity = 38/118 (32.20%), Postives = 52/118 (44.07%), Query Frame = 0
Query:    3 SVHFTIRHSDEVCFEQGAPRPVKSSKSPHALIEGFMYATVHKREELKPNDAEATTLEASSTKTEIDFSADGKSEEAXXXXXXXXXXXXXXXXXXXXL----LIDTGASENILDDRLIP 116
            SVH T  HSDE C+ QGA RP ++ K+  A       +T  +  + +P   E       + K EIDFS D  + +                          L+D+GASE + DDRLIP
Sbjct:   61 SVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHCSTQSRDIQARPTTTEIPKETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIP 178          
BLAST of mRNA_E-siliculosus-1a_F_contig13504.2097.1 vs. uniprot
Match: A0A6H5L0J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J0_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.190e-6
Identity = 39/118 (33.05%), Postives = 51/118 (43.22%), Query Frame = 0
Query:    3 SVHFTIRHSDEVCFEQGAPRPVKSSKSPHALIEGFMYATVHKREELKPNDAEATTLEASSTKTEIDFSADGKSEEAXXXXXXXXXXXXXXXXXXXXL----LIDTGASENILDDRLIP 116
            SVH T  HSDE C+ QGA RP ++ K+  A       +T  +    KP   E       + K EIDFS D  + +                          L+D+GASE I D+RLIP
Sbjct:  222 SVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHCSTQSRDTHAKPTTREIPKETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETIFDNRLIP 339          
BLAST of mRNA_E-siliculosus-1a_F_contig13504.2097.1 vs. uniprot
Match: A0A6H5JC59_9PHAE (gag_pre-integrs domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC59_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.200e-6
Identity = 38/118 (32.20%), Postives = 51/118 (43.22%), Query Frame = 0
Query:    3 SVHFTIRHSDEVCFEQGAPRPVKSSKSPHALIEGFMYATVHKREELKPNDAEATTLEASSTKTEIDFSADGKSEEAXXXXXXXXXXXXXXXXXXXXL----LIDTGASENILDDRLIP 116
            SVH T  HSDE C+ QGA RP ++ K+  A       +T  +    KP   E       + K EIDFS D  + +                          L+D+GASE + D+RLIP
Sbjct:  279 SVHNTTTHSDEECYNQGAKRPERTGKAFSACTHXXXXSTQSRDTHSKPTTTETPKEIEKTEKAEIDFSYDEDAFKGGFMYHATCSKAGGRTFTTTATGTSALVDSGASETMFDNRLIP 396          
BLAST of mRNA_E-siliculosus-1a_F_contig13504.2097.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 2.890e-6
Identity = 37/118 (31.36%), Postives = 50/118 (42.37%), Query Frame = 0
Query:    3 SVHFTIRHSDEVCFEQGAPRPVKSSKSPHALIEGFMYATVHKREELKPNDAEATTLEASSTKTEIDFSADGKSEEAXXXXXXXXXXXXXXXXXXXXL----LIDTGASENILDDRLIP 116
            SVH T  HSDE C+ QGA RP ++ K+  A        T  +    KP   E       + K E+DFS D  + +                          L+D+GASE + D+RLIP
Sbjct:  279 SVHNTTTHSDEECYNQGAKRPERTGKAFSACTHXXXXXTQSRDTHAKPTKRETPKETEKTEKAEVDFSYDEDTFKGGFMYHAICSKGSGRTFTTTATGTSALVDSGASETMFDNRLIP 396          
BLAST of mRNA_E-siliculosus-1a_F_contig13504.2097.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 3.040e-6
Identity = 38/118 (32.20%), Postives = 52/118 (44.07%), Query Frame = 0
Query:    3 SVHFTIRHSDEVCFEQGAPRPVKSSKSPHALIEGFMYATVHKREELKPNDAEATTLEASSTKTEIDFSADGKSEEAXXXXXXXXXXXXXXXXXXXXL----LIDTGASENILDDRLIP 116
            SVH T  HSDE C+ QGA RP ++ K+  A       +T  +  + KP   E       + + EIDFS D  + +                          L+D+GASE + DDRLIP
Sbjct:  279 SVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIP 396          
BLAST of mRNA_E-siliculosus-1a_F_contig13504.2097.1 vs. uniprot
Match: A0A6H5JTQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ0_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 4.220e-6
Identity = 38/118 (32.20%), Postives = 51/118 (43.22%), Query Frame = 0
Query:    3 SVHFTIRHSDEVCFEQGAPRPVKSSKSPHALIEGFMYATVHKREELKPNDAEATTLEASSTKTEIDFSADGKSEEAXXXXXXXXXXXXXXXXXXXXL----LIDTGASENILDDRLIP 116
            SVH T  HSDE C+ QGA RP ++ K+  A       +T  +    KP   E       + K EIDFS D  + +                          L+D+GASE + D+RLIP
Sbjct:  279 SVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHCSTQSRDTHAKPTTTEIPKETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIP 396          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13504.2097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5KW66_9PHAE3.180e-1638.41CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JYD3_9PHAE1.160e-1343.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSB5_9PHAE7.440e-1371.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJB9_9PHAE9.740e-833.90Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5KPR8_9PHAE2.160e-632.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0J0_9PHAE2.190e-633.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC59_9PHAE2.200e-632.20gag_pre-integrs domain-containing protein (Fragmen... [more]
A0A6H5KN28_9PHAE2.890e-631.36Uncharacterized protein (Fragment) n=3 Tax=Ectocar... [more]
A0A6H5K3T5_9PHAE3.040e-632.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTQ0_9PHAE4.220e-632.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13504contigE-siliculosus-1a_F_contig13504:686..1160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13504.2097.1mRNA_E-siliculosus-1a_F_contig13504.2097.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13504 270..1160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13504.2097.1 ID=prot_E-siliculosus-1a_F_contig13504.2097.1|Name=mRNA_E-siliculosus-1a_F_contig13504.2097.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=125bp
MGSVHFTIRHSDEVCFEQGAPRPVKSSKSPHALIEGFMYATVHKREELKP
NDAEATTLEASSTKTEIDFSADGKSEEAFMYATAHKGEEFEANAAGATLL
IDTGASENILDDRLIPGLKETMRE*
back to top