prot_E-siliculosus-1a_F_contig1331.2005.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1331.2005.1
Unique Nameprot_E-siliculosus-1a_F_contig1331.2005.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length841
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A6H5K7W3_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W3_9PHAE)

HSP 1 Score: 1094 bits (2829), Expect = 0.000e+0
Identity = 775/845 (91.72%), Postives = 786/845 (93.02%), Query Frame = 0
Query:    1 MDAGRGGGGRGRGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNGAAAKDENTKPNSADGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEGEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXX-------GDAMEEEEGAAAAPPRLPLVYVMRHANGCKLLLRLLAPDRTGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXXEGTKEGGEGTEVPLVPSSRKEASVRRRELLAYLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKAGADSAEATPDTLSFADALLEKAGGQLSTWSSTNRGGFVVTALAEVPSTGAAVREELGTKAARARLVKEATEGNNMGTKVLAERLGFGDFGAKDAAAKKRRRPGKK 838
            MDAGRGGGGRGRG    XXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXX  RSNGAA KDENTKPNSAD  D    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRPQF+TVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSY+LLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYV+ASL HRDAYIAVIRLVESVDDTVTCQK ILAELLKP EV PKTT AGN VPKAGKGTSAEEWVPRGTTAPKGN +GGVAAAGDGVTGMDVEGEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX       GDAME     AAA PRLPLV VM H NGCKLLLRLLAPD TGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXX    K GGEGTEVPLVPSSRKEASVRRRELLA+LREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTP++VAAVV+AAC KPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAK GADSA  T DTLSFADALLEKAGGQLS W STNRG FVVTALAEVPSTGAAVREELGTKAARARLV EATEGNNMGTKVLAERLGFGDFGAK+AAAKKR++  KK
Sbjct:    1 MDAGRGGGGRGRGSRRGXXXXXXXXXXXXXXXXXXRDGRXXXXXXXXXXXXXXXXXXXXXSGRSNGAAPKDENTKPNSADDVDGKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRPQFDTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYILLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLMHRDAYIAVIRLVESVDDTVTCQKAILAELLKPKEVTPKTTPAGNSVPKAGKGTSAEEWVPRGTTAPKGNSDGGVAAAGDGVTGMDVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGDAMEXXXXXAAASPRLPLVGVMCHKNGCKLLLRLLAPDHTGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXP---KAGGEGTEVPLVPSSRKEASVRRRELLAFLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPQVVAAVVKAACGKPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKDGADSAADTSDTLSFADALLEKAGGQLSAWISTNRGAFVVTALAEVPSTGAAVREELGTKAARARLVMEATEGNNMGTKVLAERLGFGDFGAKEAAAKKRKQTEKK 842          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: D7FHP3_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP3_ECTSI)

HSP 1 Score: 1015 bits (2625), Expect = 0.000e+0
Identity = 737/847 (87.01%), Postives = 746/847 (88.08%), Query Frame = 0
Query:    1 MDAGRGGGGRGRGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNGAAAKDENTKPNSADGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QQRPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEGEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXGDAMEEEEGAAAAPPRLPLVYVMRHANGCKLLLRLLAPDRTGY-----LHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXXEGTKEGGEGTEVPLVPSSRKEASVRRRELLAYLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKAGADSAEATPDTLSFADALLEKAGGQLSTWSSTNRGGFVVTALAEVPSTGAAVREELGTKAARARLVKEATEGNNMGTKVLAERLGFGDFGA-KDAAAKKRRRPGKKTR 840
            MDAGRGGGGRGRG XXXXXXXXXXXXXX    XXXXX   XXXXXXXXXXXXXXXXXXX   RSNGA  KDENTKP+S+DGGD            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QQRPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVI KLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYV+ASLTH D       +V+  D                  VAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPE GVAAAGDGVTGMDVEGEEK XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX              PP LPLVYVM H NGCKLLLRLLAPDRTGY     LHPEELELLKPTMVPSPAA XXXXXXXXXXXXXXX  TK GG+GTEVPLVPSSRKEASVRRRELLAYLREPLREACAT+APMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAK  VGKLPMHEDPSAHLFMKQLLEREAEAQKAK GADSA AT DT SFADALLEKAGGQLS+WSSTNRGGFVVTALAEVPSTGAAVREELGTK ARARLVKEATEGNNMGTKVLAERLGFGDFGA K    +     GKKTR
Sbjct:    1 MDAGRGGGGRGRGGXXXXXXXXXXXXXXSSDRXXXXXGRGXXXXXXXXXXXXXXXXXXXSSGRSNGADPKDENTKPDSSDGGDGKRKWSSDSKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVITKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLTHSD-------VVKQADHL----------------VAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPERGVAAAGDGVTGMDVEGEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------PPGLPLVYVMGHTNGCKLLLRLLAPDRTGYAFFRYLHPEELELLKPTMVPSPAAAXXXXXXXXXXXXXXX--TKAGGQGTEVPLVPSSRKEASVRRRELLAYLREPLREACATYAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKSHVGKLPMHEDPSAHLFMKQLLEREAEAQKAKGGADSAAATSDTPSFADALLEKAGGQLSSWSSTNRGGFVVTALAEVPSTGAAVREELGTKTARARLVKEATEGNNMGTKVLAERLGFGDFGARKKPQPRSAGETGKKTR 808          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A835Z7T9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T9_9STRA)

HSP 1 Score: 489 bits (1259), Expect = 1.510e-156
Identity = 336/696 (48.28%), Postives = 417/696 (59.91%), Query Frame = 0
Query:  145 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTD---DNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATP-----VQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELL----KPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEG--EEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXGDAMEEEEGAAA---------------------------------APPRLPLVYVMRHANGCKLLLRLLAPDRTGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXXEGTKEGGEGTEVPLVPSSRKEASVRRRELLAYLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKAGADSAEATPDTLSFADALLEKA----GGQLSTWSSTNRGGFVVTALAEVPSTGAAVREEL 789
            RP  +TV R+KE+WNKLRERK+  E+RA LV+EL+QL++GKV  I++KHDASRVVQ+A+ FG+  +R  ILTE+EGH+ +LSQL YAHFIVL+L +  +GAEEQ+RV K  RG   KLATH+IGARV+Q A+D LP A AA +++E YG E+ALF D   D  P +LK V+  RPDRRA+V+  V   + K+  KGL+ F FAH LLWEYM E          + ++VP ++D YM LLSTR GS AAA+CAA+G AK+RKRMM+  KG+V  SL HRDAY+AV+RLV SVDDTVTCQK++LAELL    +P   A     A     K G+G +AE WVP+G     G    G A   D   G + +G  +E   XXXXXXXXXXXXXXXXXXXXX      +        +A  EEE   A                                 AP  LP   V  H NGCKLLL L APD T YL PEE  LL+P MVP                          GEG    LV +S+K+  VRR+ELLA+L+ PL+  C  H   LMRSK AG+ VLLE  + + TP++VAA+  AA A P  G L M EDP+ HLFMKQLL  E E         +         FADALL++     GG L  W+ +NRG FV+ ALA VPS GAAVR+ L
Sbjct:  161 RPDNDTVVRAKELWNKLRERKITEEQRAPLVRELMQLLRGKVYKISMKHDASRVVQSAVTFGSNTDRDLILTELEGHLVELSQLQYAHFIVLKLLQRARGAEEQRRVTKDLRGHVAKLATHSIGARVIQQAMDMLPSARAAQLRAELYGPEHALFADMAFDKAPRNLKQVIALRPDRRAIVLEGVKRTLGKIAQKGLLSFAFAHSLLWEYMSEVNVNSDGGAAIADMVPTVIDGYMALLSTRDGSRAAALCAAYGSAKDRKRMMKGFKGFVGTSLMHRDAYLAVLRLVASVDDTVTCQKSVLAELLVPLPRPVAAAVTGVTASGAAVKPGEGVTAEAWVPKGVARSSGT---GEAVVEDDEDGGEFDGMTDEFDGXXXXXXXXXXXXXXXXXXXXXQQDEAEESDIEAGEDEAAAEEETTDAVGAQGDADTSAQAALXXXXXXXXXXXXXXXXXXAPALLP---VSLHRNGCKLLLYLAAPDATKYLDPEERHLLEPAMVPVAQ-----------------------GEGEAPVLVCASKKDPEVRRQELLAFLKAPLQSLCQEHTAELMRSKFAGANVLLEVTKNLRTPDLVAAIAAAAVAVPEEGHLAMQEDPAGHLFMKQLLLWEGEQXXXXXXXXAGW-------FADALLKRLQAGDGGGLRGWAGSNRGAFVLAALAGVPSAGAAVRKAL 820          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A7S4QEX1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QEX1_9STRA)

HSP 1 Score: 259 bits (663), Expect = 6.180e-73
Identity = 213/650 (32.77%), Postives = 306/650 (47.08%), Query Frame = 0
Query:  145 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKE-IKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDN------QPHSLKAVLK-ARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEGEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXGDAMEEEEGAAAAPPRLPLVYVMRHANGCKLLLRLLAPD---RTGYLHPEELELL--KPTMVPSPAAXXXXXXXXXXXXXXXXEGTKEGGEGTEVPLVPSSRKEASVRRRELLAYLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKPRVG--KLPMHEDPSAHLFMKQLLEREAEAQKAKAGADSAEATPDTLSFADALLEKAGGQL-STWSSTNRGGFVVTALAEV 778
            R   + V  +K IWNKLR R    EE + +   L+ L++GK++++AL+HDASRVVQ A+QFGN+++R  I  E+   I++L++  YAHF+VL+L K  ++  E  + + K+ +G   KLA HA+GARVV+    + P  S  L+K E YG ++ LFTD           +L++V K A P ++   + HV+G++ K + KGL  F +   L  EY+  ATP  ++ + P +VD  + +LSTR G+   A CAA+G  K+RK +MR+LKGY  +SL HRDAYIAV+RL + VDDTVT  K +L EL +                                     NP                                                           DA  + +         P++ +     G KL L LL  +   R  Y  P ELE+L   PT++                         E GE      VP+S+K    RR EL  +LR  L + C  HA  L+RS   G V L E  RA    E++ ++V+A   K      KLP+ EDP  HL +K LL  +AE         S E    + SF+  L  K  G+L S+  ++NRG FV+TALA+V
Sbjct:   40 RRHADAVVEAKSIWNKLRLRTNTKEETSAMADNLMGLLRGKMVEVALQHDASRVVQAAVQFGNEKQRREIAKELGSKISELAKSQYAHFVVLKLIKYCVRDGEAVRLIVKSLKGHISKLAVHAVGARVVELLFSTFPPKSTTLLKQEMYGPQFTLFTDGALSGGTAASPTLQSVFKTATPSQKKSALEHVHGLLQKGIDKGLFGFTYYQSLFCEYVIAATPNDIRSIAPSVVDHSIHMLSTRAGARVVAECAAYGTVKDRKNIMRSLKGYTRSSLLHRDAYIAVLRLADVVDDTVTLDKNVLVELQE-------------------------------------NP-----------------------------------------------------------DAKNKSDS--------PILDLALSETGSKLFLMLLPKNDEARLKYFDPYELEVLHSNPTIL-------------------------EKGEE-----VPTSKKNPDTRRMELSQHLRVSLVDLCQKHAGELLRSTSGGKV-LREVNRAFSNAEVIKSIVKACDEKVDDDDEKLPIFEDPVGHLVVKHLLTDDAE---------SGEEKEKSNSFSTLLYTKFKGKLMSSIGTSNRGAFVLTALAKV 545          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A7R9U7V4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7V4_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.030e-65
Identity = 129/300 (43.00%), Postives = 196/300 (65.33%), Query Frame = 0
Query:  147 QFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEI---KGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFT--DDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAEL 441
            Q   V R   +WN+LR+R+V  E+R KLV E+  L++GK   ++LKHD SRVVQ  + FG  E+   +L E+E  I  L    YAHF+V++L K +   +  + ++R+ K   G  ++L  H++GARVV+TAL+ LP   A  +  EFYG+E+ L T  D    H L  +LK RPDRR  ++  V G+++K++ KGL +F F  +LL EY++ A P Q+ ++VP L +  + LL +R GS AAAM AA+ GA+ER++M++ALKG+V + + HRDAY+ +++LV   DDTV+ +K +LAE+
Sbjct:   56 QSEEVSRLLRLWNQLRDRQVSSEDRRKLVNEVASLMRGKYAAMSLKHDVSRVVQAVVSFGTAEQVDEVLVEVEPRIFDLCVSPYAHFLVIKLLKSVAQPRRRDSRRRMVKLLSGHMLRLGVHSVGARVVETALEELPKPDARRLNREFYGREHLLATGGDAEGSHRLDGLLKLRPDRRETILTRVWGLLSKMIDKGLCQFVFVQELLCEYLECAGPAQIAKVVPSLAEHAVALLVSRNGSKAAAMLAAYSGARERRKMIKALKGHVKSCIFHRDAYMFLLKLVSVTDDTVSVKKNLLAEI 355          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A7S2SB37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SB37_9STRA)

HSP 1 Score: 234 bits (598), Expect = 1.500e-64
Identity = 174/563 (30.91%), Postives = 263/563 (46.71%), Query Frame = 0
Query:  145 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKE-IKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALF--------TDDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEGEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXGDAMEEEEGAAAAPPRLPLVYVMRHANGCKLLLRLLAPD---RTGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXXEGTKEGGEGTEVPLVPSSRKEASVRRRELLAYLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVE 695
            R   + V   KE+WNK+R +    EE  ++         GK  D+A++HDASR+VQ A+QFGN+++RL I+ E+   I++LS++ YAHF +L++ K  ++  +  K + K+ +G   KL  HA+GARVV+  L + P    A +K E YG ++ALF        T  N P +L++++K +PD++ V + ++  +I K + K L  F +   L  EY+   +P +++ + P + D  + LLSTR G+   A CAA+   KERKRMMR+LKGY  +SL H DAYIA++RL++  DDTVT QK +L EL               + P AGK                      V  + DG                                                      E+      P+ P++ +     G KL L LL+ D   R  Y  P ELE+LKP                            E GE      +P+S+K AS RR ELL Y++  L E C  HA  L+ S+  GS +L E      + E+  ++++
Sbjct:   56 RKHADIVVSGKELWNKMRLKSNTKEEITEMXXXXXXSFTGKFNDVAMQHDASRIVQAAIQFGNEDQRLIIVKELSSSISELSKVQYAHFAILKMIKYCVRNKDAMKIIVKSLKGHINKLCVHAVGARVVELLLATFPAKITAHLKLELYGPQFALFASGDLSASTSTNNP-TLQSIIKEQPDKKEVAVQNILNIINKGIEKSLFSFAYFQRLFSEYVLAVSPNEIRAIAPSISDHAIHLLSTRSGARVVAECAAYSTPKERKRMMRSLKGYTRSSLKHADAYIALLRLIDVTDDTVTAQKLLLEEL--------------QVDPTAGK----------------------VKVSVDGTV----------------------------------------------------EDNGDNNSPKSPILEIALSDTGSKLFLMLLSKDEERRKKYFDPSELEILKPNPT-----------------------VLENGEQ-----IPTSKKNASTRRVELLRYMKNLLVELCTLHADELLFSR-PGSKILREVFETFPSKELSESIID 500          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A4D9CTP5_9STRA (PUM-HD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTP5_9STRA)

HSP 1 Score: 239 bits (609), Expect = 4.170e-64
Identity = 132/303 (43.56%), Postives = 195/303 (64.36%), Query Frame = 0
Query:  145 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAE-EQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDN---QPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLK 443
            RP F+ V R+K IW   R +++  +ER K+ +EL  LIKGK+  IA+KHDA+RVVQ AL+ GN+ ++ + +TE+  ++ + S++ YAHFIVLRL         E+KRV++ F G+   LATHA+GA+V++    + P      +++E YG+E  L   D    Q   L A+L+  P RR  V+++V G+I K+L K L    F  +L+WEY   A PV ++ELVP L+D  +LL  TRPG  A A CAA+G  K+RK+M++ALKGYV  +L H+DAY+ ++RL + +DDTV   K +  ELL+
Sbjct:   40 RPAFDLVARAKAIWAIFRSKRLGKDEREKMSEELYSLIKGKLHQIAVKHDAARVVQAALKHGNRIQQEAYITELLEYLLEFSKVQYAHFIVLRLLDVTASLPAERKRVSRVFTGKVHTLATHAVGAKVLEGIFSTYPKQDTQALRAELYGRETTLLLGDPTGPQGRDLAAILRELPGRRERVLSNVLGMIQKMLVKDLAVLPFVQELIWEYTCNAGPVLVRELVPTLLDYLLLLTGTRPGCKALAECAAYGTPKDRKKMLKALKGYVVPTLLHKDAYLLILRLADVIDDTVAFNKAVWQELLE 342          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A7S2FGZ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FGZ7_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.220e-56
Identity = 147/461 (31.89%), Postives = 237/461 (51.41%), Query Frame = 0
Query:  145 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEI-KGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDD-----------NQPHSL-KAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEGEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXGDAMEEEEGAAAAPPRLPLVYVMRHANGCKLLLRLLAPDRTGYLHPEELELL 592
            R  ++TV   K +WN+LR +   P  R  LV +L + +KG   ++ALKHDASR+VQ+ L+FG  ++RL I+ E+   + +LS+ TYAHF+V++L     +  + Q+++ K  RG    +AT A+ AR+V+ AL +L   +A  ++ E YGKEY +FTD+            Q +S+  A+L  +P  +  ++  +  +  K + KGL+ FE+ H+LL E++      QM EL+P ++++ ++LLSTRPG+           AK+R++ ++ALKG+    LTHRDAY+AV+R+V+ +DDTV  Q+++LAEL        + T+ G I                 +  P  + +GG AA      G     ++                                       D+        A+   +PL+ V  H NG K+LLRLLAP +  YL P ++  L
Sbjct:   77 RKHYSTVTDGKVVWNELRAKSCDPARRTTLVNDLHKALKGNYPEVALKHDASRLVQSVLEFGTSDQRLDIMGEVAPRLVELSRSTYAHFVVVKLLDLADRDPKLQQQLHKALRGNIRMMATSAVAARIVELALGNLK--NAFTLRLELYGKEYGVFTDEALSKTPAYDAKGQRNSIVAAILALKPQSKPGLLEGLAVLCGKFVKKGLLAFEYVHELLDEFVGHCDEAQMAELLPSILNNALVLLSTRPGTRVVVAALGLSIAKDRRKFLKALKGHGVQLLTHRDAYLAVLRIVDVMDDTVALQRSLLAELTT------RATSDGKI-----------------SANPSLDADGGKAALASMGKGTQPNTDD-----------------------------------VDDDDSCPAAGDTTASAGPMPLLDVALHTNGSKMLLRLLAPTKEKYLDPWDITAL 477          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A448Z1A3_9STRA (PUM-HD domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1A3_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.190e-55
Identity = 126/311 (40.51%), Postives = 194/311 (62.38%), Query Frame = 0
Query:  145 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEI---EGHIAQLSQLTYAHFIVLRLFKEIKGAEEQ-KRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDD-NQPHSLKAVL---KARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELL-KPTE 446
            R    +V  +K +WNKLR +    E+  KL+++++ LI+GKV +IAL+HDASRVVQ A+QFG+  +R  IL EI   EG + +++++ YAHF+ L+  K     E   K + K+F+G+  KLA H +GARVV++   +LP    A +K EFYG  ++LF  D     SLK+ +   K    +++ +   V  +I K ++K    F +   L  EY++ A P +++ +   + D  + LLSTR G+   A CA++G  K+RKR  ++LKGY S+SL HRDAY+A++RLV+  DDTV+ QK++L E+L KP E
Sbjct:   63 RRHAESVTEAKALWNKLRMKTNTKEDTQKLMEKVMDLIRGKVREIALQHDASRVVQAAIQFGSDAQRKEILEEICRSEGSLGEMAKIQYAHFVSLKFIKYCARDEASVKLIVKSFKGEMPKLAVHGVGARVVESIFLNLPSKLTAPLKQEFYGPHFSLFAKDLTSAPSLKSNIENAKTETQKKSAI-DFVQAIINKGMTKSFYGFTYFQQLFAEYVEVADPSEIRSISSSVADHSIHLLSTRVGTRVVAACASYGTPKDRKRSCKSLKGYTSSSLLHRDAYLALLRLVQVTDDTVSIQKSVLNEILTKPKE 372          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: B5YP90_THAPS (RNA-binding protein of the pumilio family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YP90_THAPS)

HSP 1 Score: 209 bits (531), Expect = 5.990e-54
Identity = 121/330 (36.67%), Postives = 192/330 (58.18%), Query Frame = 0
Query:  145 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEI-------------EGH----IAQLSQLTYAHFIVLRLFKEIKGAEEQ-KRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHS--------------LKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQE-LVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAEL 441
            R    TV+ +KEIWN+LR +    ++ +KL  EL  L +GK+M++A++HDASR+VQ  +QFGN+ ER   + E+             +GH    +A+L ++ YAHF+VL++ K     E+  K + K+ R Q  KLA H++G+RVV+    + P  + A +K E YG +YALF   N   +              L + ++  PD+    + H+  ++ K L K L  F + H LL++Y+  A+P  +++ L P L +  + L+STR G+     CAA+G  K+RK+M++  KGY  +SL HRDAY+A++R+V+ +DDTV   K +LAEL
Sbjct:   61 RKHATTVRTAKEIWNELRIKTNTSDQNSKLATELYGLFEGKMMEVAMQHDASRMVQAVIQFGNKNERGETVRELCGVSGGAVQKEESKGHGTVNLAELCKIQYAHFVVLKMIKYCARDEDSVKLIVKSLRKQMTKLAVHSVGSRVVELLFATFPSKATAPLKLELYGPQYALFATSNPTPTDGKSKSSISPTLPTLASFIETNPDKLESTLTHLQTLLQKGLDKHLTGFAYFHSLLFDYVSIASPNDIRDFLTPALAEHSLHLISTRAGTKVVCECAAYGSVKDRKKMLKCFKGYTRSSLLHRDAYLAILRMVDVMDDTVLVNKMLLAEL 390          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7W3_9PHAE0.000e+091.72PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FHP3_ECTSI0.000e+087.01PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7T9_9STRA1.510e-15648.28Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A7S4QEX1_9STRA6.180e-7332.77Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7R9U7V4_9STRA1.030e-6543.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2SB37_9STRA1.500e-6430.91Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A4D9CTP5_9STRA4.170e-6443.56PUM-HD domain-containing protein n=2 Tax=Monodopsi... [more]
A0A7S2FGZ7_9STRA1.220e-5631.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A448Z1A3_9STRA1.190e-5540.51PUM-HD domain-containing protein n=1 Tax=Pseudo-ni... [more]
B5YP90_THAPS5.990e-5436.67RNA-binding protein of the pumilio family n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 520..547
NoneNo IPR availableCOILSCoilCoilcoord: 496..516
NoneNo IPR availablePANTHERPTHR13389:SF0PUMILIO HOMOLOG 3coord: 562..815
coord: 66..443
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 254..289
e-value: 0.83
score: 18.7
coord: 181..216
e-value: 0.0071
score: 25.6
coord: 217..253
e-value: 11.0
score: 12.5
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 180..216
score: 8.337
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 217..253
score: 5.911
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 254..289
score: 6.914
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 151..339
e-value: 6.5E-35
score: 122.6
IPR012959CPL domainPFAMPF08144CPLcoord: 635..729
e-value: 2.9E-6
score: 27.7
IPR040059Pumilio homologue 3PANTHERPTHR13389UNCHARACTERIZEDcoord: 562..815
IPR040059Pumilio homologue 3PANTHERPTHR13389UNCHARACTERIZEDcoord: 66..443
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 153..506
score: 20.734
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 162..577

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1331contigE-siliculosus-1a_F_contig1331:5597..16163 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1331.2005.1mRNA_E-siliculosus-1a_F_contig1331.2005.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1331 5436..16163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1331.2005.1 ID=prot_E-siliculosus-1a_F_contig1331.2005.1|Name=mRNA_E-siliculosus-1a_F_contig1331.2005.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=841bp
MDAGRGGGGRGRGDRGGRGRGRGGGRGNSSDRGGGRGGRGGRGRGGGRGA
GRGEGRGRGSGGRSNGAAAKDENTKPNSADGGDGKRKRSSDSKGAGGRGR
GRGRGGGKAGGGRGSNKKESGGGGEEDKGPANKKRKLKLERQQQRPQFNT
VKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQ
TALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKR
VAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFT
DDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWE
YMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMM
RALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPK
TTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEG
EEKEEEEDEEDEDEDEDDEEDEDEDEDDEDEEKKEEKKEEGDAMEEEEGA
AAAPPRLPLVYVMRHANGCKLLLRLLAPDRTGYLHPEELELLKPTMVPSP
AAAKAAAAATGDNDDDDDEGTKEGGEGTEVPLVPSSRKEASVRRRELLAY
LREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAK
PRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKAGADSAEATPDTLSFADA
LLEKAGGQLSTWSSTNRGGFVVTALAEVPSTGAAVREELGTKAARARLVK
EATEGNNMGTKVLAERLGFGDFGAKDAAAKKRRRPGKKTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR033133PUM-HD
IPR040059PUM3
IPR012959CPL_dom
IPR011989ARM-like
IPR001313Pumilio_RNA-bd_rpt