mRNA_E-siliculosus-1a_F_contig1331.2005.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1331.2005.1
Unique NamemRNA_E-siliculosus-1a_F_contig1331.2005.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A6H5K7W3_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W3_9PHAE)

HSP 1 Score: 1094 bits (2829), Expect = 0.000e+0
Identity = 775/845 (91.72%), Postives = 786/845 (93.02%), Query Frame = 1
Query:    1 MDAGRGGGGRGRGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNGAAAKDENTKPNSADGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEGEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXX-------GDAMEEEEGAAAAPPRLPLVYVMRHANGCKLLLRLLAPDRTGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXXEGTKEGGEGTEVPLVPSSRKEASVRRRELLAYLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKAGADSAEATPDTLSFADALLEKAGGQLSTWSSTNRGGFVVTALAEVPSTGAAVREELGTKAARARLVKEATEGNNMGTKVLAERLGFGDFGAKDAAAKKRRRPGKK 2514
            MDAGRGGGGRGRG    XXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXX  RSNGAA KDENTKPNSAD  D    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRPQF+TVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSY+LLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYV+ASL HRDAYIAVIRLVESVDDTVTCQK ILAELLKP EV PKTT AGN VPKAGKGTSAEEWVPRGTTAPKGN +GGVAAAGDGVTGMDVEGEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX       GDAME     AAA PRLPLV VM H NGCKLLLRLLAPD TGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXX    K GGEGTEVPLVPSSRKEASVRRRELLA+LREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTP++VAAVV+AAC KPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAK GADSA  T DTLSFADALLEKAGGQLS W STNRG FVVTALAEVPSTGAAVREELGTKAARARLV EATEGNNMGTKVLAERLGFGDFGAK+AAAKKR++  KK
Sbjct:    1 MDAGRGGGGRGRGSRRGXXXXXXXXXXXXXXXXXXRDGRXXXXXXXXXXXXXXXXXXXXXSGRSNGAAPKDENTKPNSADDVDGKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRPQFDTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYILLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLMHRDAYIAVIRLVESVDDTVTCQKAILAELLKPKEVTPKTTPAGNSVPKAGKGTSAEEWVPRGTTAPKGNSDGGVAAAGDGVTGMDVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGDAMEXXXXXAAASPRLPLVGVMCHKNGCKLLLRLLAPDHTGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXP---KAGGEGTEVPLVPSSRKEASVRRRELLAFLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPQVVAAVVKAACGKPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKDGADSAADTSDTLSFADALLEKAGGQLSAWISTNRGAFVVTALAEVPSTGAAVREELGTKAARARLVMEATEGNNMGTKVLAERLGFGDFGAKEAAAKKRKQTEKK 842          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: D7FHP3_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP3_ECTSI)

HSP 1 Score: 1015 bits (2624), Expect = 0.000e+0
Identity = 737/847 (87.01%), Postives = 746/847 (88.08%), Query Frame = 1
Query:    1 MDAGRGGGGRGRGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNGAAAKDENTKPNSADGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QQRPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEGEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXGDAMEEEEGAAAAPPRLPLVYVMRHANGCKLLLRLLAPDRTGY-----LHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXXEGTKEGGEGTEVPLVPSSRKEASVRRRELLAYLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKAGADSAEATPDTLSFADALLEKAGGQLSTWSSTNRGGFVVTALAEVPSTGAAVREELGTKAARARLVKEATEGNNMGTKVLAERLGFGDFGA-KDAAAKKRRRPGKKTR 2520
            MDAGRGGGGRGRG XXXXXXXXXXXXXX    XXXXX   XXXXXXXXXXXXXXXXXXX   RSNGA  KDENTKP+S+DGGD            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QQRPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVI KLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYV+ASLTH D       +V+  D                  VAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPE GVAAAGDGVTGMDVEGEEK XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX              PP LPLVYVM H NGCKLLLRLLAPDRTGY     LHPEELELLKPTMVPSPAA XXXXXXXXXXXXXXX  TK GG+GTEVPLVPSSRKEASVRRRELLAYLREPLREACAT+APMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAK  VGKLPMHEDPSAHLFMKQLLEREAEAQKAK GADSA AT DT SFADALLEKAGGQLS+WSSTNRGGFVVTALAEVPSTGAAVREELGTK ARARLVKEATEGNNMGTKVLAERLGFGDFGA K    +     GKKTR
Sbjct:    1 MDAGRGGGGRGRGGXXXXXXXXXXXXXXSSDRXXXXXGRGXXXXXXXXXXXXXXXXXXXSSGRSNGADPKDENTKPDSSDGGDGKRKWSSDSKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVITKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLTHSD-------VVKQADHL----------------VAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPERGVAAAGDGVTGMDVEGEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------PPGLPLVYVMGHTNGCKLLLRLLAPDRTGYAFFRYLHPEELELLKPTMVPSPAAAXXXXXXXXXXXXXXX--TKAGGQGTEVPLVPSSRKEASVRRRELLAYLREPLREACATYAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKSHVGKLPMHEDPSAHLFMKQLLEREAEAQKAKGGADSAAATSDTPSFADALLEKAGGQLSSWSSTNRGGFVVTALAEVPSTGAAVREELGTKTARARLVKEATEGNNMGTKVLAERLGFGDFGARKKPQPRSAGETGKKTR 808          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A835Z7T9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T9_9STRA)

HSP 1 Score: 489 bits (1259), Expect = 7.050e-156
Identity = 336/696 (48.28%), Postives = 417/696 (59.91%), Query Frame = 1
Query:  433 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTD---DNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATP-----VQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELL----KPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEG--EEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXGDAMEEEEGAAA---------------------------------APPRLPLVYVMRHANGCKLLLRLLAPDRTGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXXEGTKEGGEGTEVPLVPSSRKEASVRRRELLAYLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKAGADSAEATPDTLSFADALLEKA----GGQLSTWSSTNRGGFVVTALAEVPSTGAAVREEL 2367
            RP  +TV R+KE+WNKLRERK+  E+RA LV+EL+QL++GKV  I++KHDASRVVQ+A+ FG+  +R  ILTE+EGH+ +LSQL YAHFIVL+L +  +GAEEQ+RV K  RG   KLATH+IGARV+Q A+D LP A AA +++E YG E+ALF D   D  P +LK V+  RPDRRA+V+  V   + K+  KGL+ F FAH LLWEYM E          + ++VP ++D YM LLSTR GS AAA+CAA+G AK+RKRMM+  KG+V  SL HRDAY+AV+RLV SVDDTVTCQK++LAELL    +P   A     A     K G+G +AE WVP+G     G    G A   D   G + +G  +E   XXXXXXXXXXXXXXXXXXXXX      +        +A  EEE   A                                 AP  LP   V  H NGCKLLL L APD T YL PEE  LL+P MVP                          GEG    LV +S+K+  VRR+ELLA+L+ PL+  C  H   LMRSK AG+ VLLE  + + TP++VAA+  AA A P  G L M EDP+ HLFMKQLL  E E         +         FADALL++     GG L  W+ +NRG FV+ ALA VPS GAAVR+ L
Sbjct:  161 RPDNDTVVRAKELWNKLRERKITEEQRAPLVRELMQLLRGKVYKISMKHDASRVVQSAVTFGSNTDRDLILTELEGHLVELSQLQYAHFIVLKLLQRARGAEEQRRVTKDLRGHVAKLATHSIGARVIQQAMDMLPSARAAQLRAELYGPEHALFADMAFDKAPRNLKQVIALRPDRRAIVLEGVKRTLGKIAQKGLLSFAFAHSLLWEYMSEVNVNSDGGAAIADMVPTVIDGYMALLSTRDGSRAAALCAAYGSAKDRKRMMKGFKGFVGTSLMHRDAYLAVLRLVASVDDTVTCQKSVLAELLVPLPRPVAAAVTGVTASGAAVKPGEGVTAEAWVPKGVARSSGT---GEAVVEDDEDGGEFDGMTDEFDGXXXXXXXXXXXXXXXXXXXXXQQDEAEESDIEAGEDEAAAEEETTDAVGAQGDADTSAQAALXXXXXXXXXXXXXXXXXXAPALLP---VSLHRNGCKLLLYLAAPDATKYLDPEERHLLEPAMVPVAQ-----------------------GEGEAPVLVCASKKDPEVRRQELLAFLKAPLQSLCQEHTAELMRSKFAGANVLLEVTKNLRTPDLVAAIAAAAVAVPEEGHLAMQEDPAGHLFMKQLLLWEGEQXXXXXXXXAGW-------FADALLKRLQAGDGGGLRGWAGSNRGAFVLAALAGVPSAGAAVRKAL 820          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A7S4QEX1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QEX1_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.410e-72
Identity = 213/650 (32.77%), Postives = 306/650 (47.08%), Query Frame = 1
Query:  433 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKE-IKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDN------QPHSLKAVLK-ARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEGEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXGDAMEEEEGAAAAPPRLPLVYVMRHANGCKLLLRLLAPD---RTGYLHPEELELL--KPTMVPSPAAXXXXXXXXXXXXXXXXEGTKEGGEGTEVPLVPSSRKEASVRRRELLAYLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKPRVG--KLPMHEDPSAHLFMKQLLEREAEAQKAKAGADSAEATPDTLSFADALLEKAGGQL-STWSSTNRGGFVVTALAEV 2334
            R   + V  +K IWNKLR R    EE + +   L+ L++GK++++AL+HDASRVVQ A+QFGN+++R  I  E+   I++L++  YAHF+VL+L K  ++  E  + + K+ +G   KLA HA+GARVV+    + P  S  L+K E YG ++ LFTD           +L++V K A P ++   + HV+G++ K + KGL  F +   L  EY+  ATP  ++ + P +VD  + +LSTR G+   A CAA+G  K+RK +MR+LKGY  +SL HRDAYIAV+RL + VDDTVT  K +L EL +                                     NP                                                           DA  + +         P++ +     G KL L LL  +   R  Y  P ELE+L   PT++                         E GE      VP+S+K    RR EL  +LR  L + C  HA  L+RS   G V L E  RA    E++ ++V+A   K      KLP+ EDP  HL +K LL  +AE         S E    + SF+  L  K  G+L S+  ++NRG FV+TALA+V
Sbjct:   40 RRHADAVVEAKSIWNKLRLRTNTKEETSAMADNLMGLLRGKMVEVALQHDASRVVQAAVQFGNEKQRREIAKELGSKISELAKSQYAHFVVLKLIKYCVRDGEAVRLIVKSLKGHISKLAVHAVGARVVELLFSTFPPKSTTLLKQEMYGPQFTLFTDGALSGGTAASPTLQSVFKTATPSQKKSALEHVHGLLQKGIDKGLFGFTYYQSLFCEYVIAATPNDIRSIAPSVVDHSIHMLSTRAGARVVAECAAYGTVKDRKNIMRSLKGYTRSSLLHRDAYIAVLRLADVVDDTVTLDKNVLVELQE-------------------------------------NP-----------------------------------------------------------DAKNKSDS--------PILDLALSETGSKLFLMLLPKNDEARLKYFDPYELEVLHSNPTIL-------------------------EKGEE-----VPTSKKNPDTRRMELSQHLRVSLVDLCQKHAGELLRSTSGGKV-LREVNRAFSNAEVIKSIVKACDEKVDDDDEKLPIFEDPVGHLVVKHLLTDDAE---------SGEEKEKSNSFSTLLYTKFKGKLMSSIGTSNRGAFVLTALAKV 545          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A7R9U7V4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7V4_9STRA)

HSP 1 Score: 241 bits (616), Expect = 2.110e-65
Identity = 129/300 (43.00%), Postives = 196/300 (65.33%), Query Frame = 1
Query:  439 QFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEI---KGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFT--DDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAEL 1323
            Q   V R   +WN+LR+R+V  E+R KLV E+  L++GK   ++LKHD SRVVQ  + FG  E+   +L E+E  I  L    YAHF+V++L K +   +  + ++R+ K   G  ++L  H++GARVV+TAL+ LP   A  +  EFYG+E+ L T  D    H L  +LK RPDRR  ++  V G+++K++ KGL +F F  +LL EY++ A P Q+ ++VP L +  + LL +R GS AAAM AA+ GA+ER++M++ALKG+V + + HRDAY+ +++LV   DDTV+ +K +LAE+
Sbjct:   56 QSEEVSRLLRLWNQLRDRQVSSEDRRKLVNEVASLMRGKYAAMSLKHDVSRVVQAVVSFGTAEQVDEVLVEVEPRIFDLCVSPYAHFLVIKLLKSVAQPRRRDSRRRMVKLLSGHMLRLGVHSVGARVVETALEELPKPDARRLNREFYGREHLLATGGDAEGSHRLDGLLKLRPDRRETILTRVWGLLSKMIDKGLCQFVFVQELLCEYLECAGPAQIAKVVPSLAEHAVALLVSRNGSKAAAMLAAYSGARERRKMIKALKGHVKSCIFHRDAYMFLLKLVSVTDDTVSVKKNLLAEI 355          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A7S2SB37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SB37_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.950e-64
Identity = 174/563 (30.91%), Postives = 263/563 (46.71%), Query Frame = 1
Query:  433 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKE-IKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALF--------TDDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEGEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXGDAMEEEEGAAAAPPRLPLVYVMRHANGCKLLLRLLAPD---RTGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXXEGTKEGGEGTEVPLVPSSRKEASVRRRELLAYLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVE 2085
            R   + V   KE+WNK+R +    EE  ++         GK  D+A++HDASR+VQ A+QFGN+++RL I+ E+   I++LS++ YAHF +L++ K  ++  +  K + K+ +G   KL  HA+GARVV+  L + P    A +K E YG ++ALF        T  N P +L++++K +PD++ V + ++  +I K + K L  F +   L  EY+   +P +++ + P + D  + LLSTR G+   A CAA+   KERKRMMR+LKGY  +SL H DAYIA++RL++  DDTVT QK +L EL               + P AGK                      V  + DG                                                      E+      P+ P++ +     G KL L LL+ D   R  Y  P ELE+LKP                            E GE      +P+S+K AS RR ELL Y++  L E C  HA  L+ S+  GS +L E      + E+  ++++
Sbjct:   56 RKHADIVVSGKELWNKMRLKSNTKEEITEMXXXXXXSFTGKFNDVAMQHDASRIVQAAIQFGNEDQRLIIVKELSSSISELSKVQYAHFAILKMIKYCVRNKDAMKIIVKSLKGHINKLCVHAVGARVVELLLATFPAKITAHLKLELYGPQFALFASGDLSASTSTNNP-TLQSIIKEQPDKKEVAVQNILNIINKGIEKSLFSFAYFQRLFSEYVLAVSPNEIRAIAPSISDHAIHLLSTRSGARVVAECAAYSTPKERKRMMRSLKGYTRSSLKHADAYIALLRLIDVTDDTVTAQKLLLEEL--------------QVDPTAGK----------------------VKVSVDGTV----------------------------------------------------EDNGDNNSPKSPILEIALSDTGSKLFLMLLSKDEERRKKYFDPSELEILKPNPT-----------------------VLENGEQ-----IPTSKKNASTRRVELLRYMKNLLVELCTLHADELLFSR-PGSKILREVFETFPSKELSESIID 500          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A4D9CTP5_9STRA (PUM-HD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTP5_9STRA)

HSP 1 Score: 239 bits (609), Expect = 8.470e-64
Identity = 132/303 (43.56%), Postives = 195/303 (64.36%), Query Frame = 1
Query:  433 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAE-EQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDN---QPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLK 1329
            RP F+ V R+K IW   R +++  +ER K+ +EL  LIKGK+  IA+KHDA+RVVQ AL+ GN+ ++ + +TE+  ++ + S++ YAHFIVLRL         E+KRV++ F G+   LATHA+GA+V++    + P      +++E YG+E  L   D    Q   L A+L+  P RR  V+++V G+I K+L K L    F  +L+WEY   A PV ++ELVP L+D  +LL  TRPG  A A CAA+G  K+RK+M++ALKGYV  +L H+DAY+ ++RL + +DDTV   K +  ELL+
Sbjct:   40 RPAFDLVARAKAIWAIFRSKRLGKDEREKMSEELYSLIKGKLHQIAVKHDAARVVQAALKHGNRIQQEAYITELLEYLLEFSKVQYAHFIVLRLLDVTASLPAERKRVSRVFTGKVHTLATHAVGAKVLEGIFSTYPKQDTQALRAELYGRETTLLLGDPTGPQGRDLAAILRELPGRRERVLSNVLGMIQKMLVKDLAVLPFVQELIWEYTCNAGPVLVRELVPTLLDYLLLLTGTRPGCKALAECAAYGTPKDRKKMLKALKGYVVPTLLHKDAYLLILRLADVIDDTVAFNKAVWQELLE 342          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A7S2FGZ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FGZ7_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.140e-56
Identity = 147/461 (31.89%), Postives = 237/461 (51.41%), Query Frame = 1
Query:  433 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEI-KGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDD-----------NQPHSL-KAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPKTTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEGEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXGDAMEEEEGAAAAPPRLPLVYVMRHANGCKLLLRLLAPDRTGYLHPEELELL 1776
            R  ++TV   K +WN+LR +   P  R  LV +L + +KG   ++ALKHDASR+VQ+ L+FG  ++RL I+ E+   + +LS+ TYAHF+V++L     +  + Q+++ K  RG    +AT A+ AR+V+ AL +L   +A  ++ E YGKEY +FTD+            Q +S+  A+L  +P  +  ++  +  +  K + KGL+ FE+ H+LL E++      QM EL+P ++++ ++LLSTRPG+           AK+R++ ++ALKG+    LTHRDAY+AV+R+V+ +DDTV  Q+++LAEL        + T+ G I                 +  P  + +GG AA      G     ++                                       D+        A+   +PL+ V  H NG K+LLRLLAP +  YL P ++  L
Sbjct:   77 RKHYSTVTDGKVVWNELRAKSCDPARRTTLVNDLHKALKGNYPEVALKHDASRLVQSVLEFGTSDQRLDIMGEVAPRLVELSRSTYAHFVVVKLLDLADRDPKLQQQLHKALRGNIRMMATSAVAARIVELALGNLK--NAFTLRLELYGKEYGVFTDEALSKTPAYDAKGQRNSIVAAILALKPQSKPGLLEGLAVLCGKFVKKGLLAFEYVHELLDEFVGHCDEAQMAELLPSILNNALVLLSTRPGTRVVVAALGLSIAKDRRKFLKALKGHGVQLLTHRDAYLAVLRIVDVMDDTVALQRSLLAELTT------RATSDGKI-----------------SANPSLDADGGKAALASMGKGTQPNTDD-----------------------------------VDDDDSCPAAGDTTASAGPMPLLDVALHTNGSKMLLRLLAPTKEKYLDPWDITAL 477          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: A0A448Z1A3_9STRA (PUM-HD domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1A3_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.020e-55
Identity = 126/311 (40.51%), Postives = 194/311 (62.38%), Query Frame = 1
Query:  433 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEI---EGHIAQLSQLTYAHFIVLRLFKEIKGAEEQ-KRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDD-NQPHSLKAVL---KARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELL-KPTE 1338
            R    +V  +K +WNKLR +    E+  KL+++++ LI+GKV +IAL+HDASRVVQ A+QFG+  +R  IL EI   EG + +++++ YAHF+ L+  K     E   K + K+F+G+  KLA H +GARVV++   +LP    A +K EFYG  ++LF  D     SLK+ +   K    +++ +   V  +I K ++K    F +   L  EY++ A P +++ +   + D  + LLSTR G+   A CA++G  K+RKR  ++LKGY S+SL HRDAY+A++RLV+  DDTV+ QK++L E+L KP E
Sbjct:   63 RRHAESVTEAKALWNKLRMKTNTKEDTQKLMEKVMDLIRGKVREIALQHDASRVVQAAIQFGSDAQRKEILEEICRSEGSLGEMAKIQYAHFVSLKFIKYCARDEASVKLIVKSFKGEMPKLAVHGVGARVVESIFLNLPSKLTAPLKQEFYGPHFSLFAKDLTSAPSLKSNIENAKTETQKKSAI-DFVQAIINKGMTKSFYGFTYFQQLFAEYVEVADPSEIRSISSSVADHSIHLLSTRVGTRVVAACASYGTPKDRKRSCKSLKGYTSSSLLHRDAYLALLRLVQVTDDTVSIQKSVLNEILTKPKE 372          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Match: B5YP90_THAPS (RNA-binding protein of the pumilio family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YP90_THAPS)

HSP 1 Score: 209 bits (531), Expect = 9.980e-54
Identity = 121/330 (36.67%), Postives = 192/330 (58.18%), Query Frame = 1
Query:  433 RPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEI-------------EGH----IAQLSQLTYAHFIVLRLFKEIKGAEEQ-KRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHS--------------LKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQE-LVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAEL 1323
            R    TV+ +KEIWN+LR +    ++ +KL  EL  L +GK+M++A++HDASR+VQ  +QFGN+ ER   + E+             +GH    +A+L ++ YAHF+VL++ K     E+  K + K+ R Q  KLA H++G+RVV+    + P  + A +K E YG +YALF   N   +              L + ++  PD+    + H+  ++ K L K L  F + H LL++Y+  A+P  +++ L P L +  + L+STR G+     CAA+G  K+RK+M++  KGY  +SL HRDAY+A++R+V+ +DDTV   K +LAEL
Sbjct:   61 RKHATTVRTAKEIWNELRIKTNTSDQNSKLATELYGLFEGKMMEVAMQHDASRMVQAVIQFGNKNERGETVRELCGVSGGAVQKEESKGHGTVNLAELCKIQYAHFVVLKMIKYCARDEDSVKLIVKSLRKQMTKLAVHSVGSRVVELLFATFPSKATAPLKLELYGPQYALFATSNPTPTDGKSKSSISPTLPTLASFIETNPDKLESTLTHLQTLLQKGLDKHLTGFAYFHSLLFDYVSIASPNDIRDFLTPALAEHSLHLISTRAGTKVVCECAAYGSVKDRKKMLKCFKGYTRSSLLHRDAYLAILRMVDVMDDTVLVNKMLLAEL 390          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7W3_9PHAE0.000e+091.72PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FHP3_ECTSI0.000e+087.01PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7T9_9STRA7.050e-15648.28Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A7S4QEX1_9STRA1.410e-7232.77Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7R9U7V4_9STRA2.110e-6543.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2SB37_9STRA2.950e-6430.91Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A4D9CTP5_9STRA8.470e-6443.56PUM-HD domain-containing protein n=2 Tax=Monodopsi... [more]
A0A7S2FGZ7_9STRA2.140e-5631.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A448Z1A3_9STRA2.020e-5540.51PUM-HD domain-containing protein n=1 Tax=Pseudo-ni... [more]
B5YP90_THAPS9.980e-5436.67RNA-binding protein of the pumilio family n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1331contigE-siliculosus-1a_F_contig1331:5436..16163 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size2523
Model size2684
Exons12
Ec32 orthologEc-07_006210.1
Ec32 ortholog descriptionPumilio RNA-binding repeat protein
Hectar predicted targeting categoryother localisation
BRITEko00000,ko03009,ko03019
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.E
EggNOG OGsKOG2050@1,KOG2050@2759
EggNOG free text desc.mRNA binding
KEGG koko:K14844
Preferred namePUF8
Seed eggNOG ortholog2880.D7FHP3
Seed ortholog evalue2.6e-296
Seed ortholog score1024.6
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927851.9649434-UTR-E-siliculosus-1a_F_contig1331:5435..55961622927851.9649434-UTR-E-siliculosus-1a_F_contig1331:5435..5596Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1331 5436..5596 -
1696318708.358423-UTR-E-siliculosus-1a_F_contig1331:5435..55961696318708.358423-UTR-E-siliculosus-1a_F_contig1331:5435..5596Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1331 5436..5596 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927851.9826493-CDS-E-siliculosus-1a_F_contig1331:5596..56861622927851.9826493-CDS-E-siliculosus-1a_F_contig1331:5596..5686Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 5597..5686 -
1696318708.367481-CDS-E-siliculosus-1a_F_contig1331:5596..56861696318708.367481-CDS-E-siliculosus-1a_F_contig1331:5596..5686Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 5597..5686 -
1622927852.0011284-CDS-E-siliculosus-1a_F_contig1331:6417..67201622927852.0011284-CDS-E-siliculosus-1a_F_contig1331:6417..6720Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 6418..6720 -
1696318708.3747072-CDS-E-siliculosus-1a_F_contig1331:6417..67201696318708.3747072-CDS-E-siliculosus-1a_F_contig1331:6417..6720Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 6418..6720 -
1622927852.0200388-CDS-E-siliculosus-1a_F_contig1331:7617..77011622927852.0200388-CDS-E-siliculosus-1a_F_contig1331:7617..7701Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 7618..7701 -
1696318708.381972-CDS-E-siliculosus-1a_F_contig1331:7617..77011696318708.381972-CDS-E-siliculosus-1a_F_contig1331:7617..7701Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 7618..7701 -
1622927852.04565-CDS-E-siliculosus-1a_F_contig1331:8664..89651622927852.04565-CDS-E-siliculosus-1a_F_contig1331:8664..8965Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 8665..8965 -
1696318708.389199-CDS-E-siliculosus-1a_F_contig1331:8664..89651696318708.389199-CDS-E-siliculosus-1a_F_contig1331:8664..8965Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 8665..8965 -
1622927852.0803301-CDS-E-siliculosus-1a_F_contig1331:9517..99241622927852.0803301-CDS-E-siliculosus-1a_F_contig1331:9517..9924Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 9518..9924 -
1696318708.3963976-CDS-E-siliculosus-1a_F_contig1331:9517..99241696318708.3963976-CDS-E-siliculosus-1a_F_contig1331:9517..9924Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 9518..9924 -
1622927852.0993807-CDS-E-siliculosus-1a_F_contig1331:10266..103631622927852.0993807-CDS-E-siliculosus-1a_F_contig1331:10266..10363Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 10267..10363 -
1696318708.4038575-CDS-E-siliculosus-1a_F_contig1331:10266..103631696318708.4038575-CDS-E-siliculosus-1a_F_contig1331:10266..10363Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 10267..10363 -
1622927852.115815-CDS-E-siliculosus-1a_F_contig1331:10757..109151622927852.115815-CDS-E-siliculosus-1a_F_contig1331:10757..10915Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 10758..10915 -
1696318708.4116082-CDS-E-siliculosus-1a_F_contig1331:10757..109151696318708.4116082-CDS-E-siliculosus-1a_F_contig1331:10757..10915Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 10758..10915 -
1622927852.1328714-CDS-E-siliculosus-1a_F_contig1331:11487..116171622927852.1328714-CDS-E-siliculosus-1a_F_contig1331:11487..11617Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 11488..11617 -
1696318708.4191961-CDS-E-siliculosus-1a_F_contig1331:11487..116171696318708.4191961-CDS-E-siliculosus-1a_F_contig1331:11487..11617Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 11488..11617 -
1622927852.1476505-CDS-E-siliculosus-1a_F_contig1331:12390..124791622927852.1476505-CDS-E-siliculosus-1a_F_contig1331:12390..12479Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 12391..12479 -
1696318708.4282568-CDS-E-siliculosus-1a_F_contig1331:12390..124791696318708.4282568-CDS-E-siliculosus-1a_F_contig1331:12390..12479Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 12391..12479 -
1622927852.163885-CDS-E-siliculosus-1a_F_contig1331:13883..141201622927852.163885-CDS-E-siliculosus-1a_F_contig1331:13883..14120Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 13884..14120 -
1696318708.4402516-CDS-E-siliculosus-1a_F_contig1331:13883..141201696318708.4402516-CDS-E-siliculosus-1a_F_contig1331:13883..14120Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 13884..14120 -
1622927852.188263-CDS-E-siliculosus-1a_F_contig1331:14733..148651622927852.188263-CDS-E-siliculosus-1a_F_contig1331:14733..14865Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 14734..14865 -
1696318708.4483817-CDS-E-siliculosus-1a_F_contig1331:14733..148651696318708.4483817-CDS-E-siliculosus-1a_F_contig1331:14733..14865Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 14734..14865 -
1622927852.2060423-CDS-E-siliculosus-1a_F_contig1331:15668..161631622927852.2060423-CDS-E-siliculosus-1a_F_contig1331:15668..16163Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 15669..16163 -
1696318708.4560935-CDS-E-siliculosus-1a_F_contig1331:15668..161631696318708.4560935-CDS-E-siliculosus-1a_F_contig1331:15668..16163Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 15669..16163 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1331.2005.1prot_E-siliculosus-1a_F_contig1331.2005.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1331 5597..16163 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1331.2005.1

>prot_E-siliculosus-1a_F_contig1331.2005.1 ID=prot_E-siliculosus-1a_F_contig1331.2005.1|Name=mRNA_E-siliculosus-1a_F_contig1331.2005.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=841bp
MDAGRGGGGRGRGDRGGRGRGRGGGRGNSSDRGGGRGGRGGRGRGGGRGA
GRGEGRGRGSGGRSNGAAAKDENTKPNSADGGDGKRKRSSDSKGAGGRGR
GRGRGGGKAGGGRGSNKKESGGGGEEDKGPANKKRKLKLERQQQRPQFNT
VKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQ
TALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKR
VAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFT
DDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWE
YMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMM
RALKGYVSASLTHRDAYIAVIRLVESVDDTVTCQKTILAELLKPTEVAPK
TTAAGNIVPKAGKGTSAEEWVPRGTTAPKGNPEGGVAAAGDGVTGMDVEG
EEKEEEEDEEDEDEDEDDEEDEDEDEDDEDEEKKEEKKEEGDAMEEEEGA
AAAPPRLPLVYVMRHANGCKLLLRLLAPDRTGYLHPEELELLKPTMVPSP
AAAKAAAAATGDNDDDDDEGTKEGGEGTEVPLVPSSRKEASVRRRELLAY
LREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAK
PRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKAGADSAEATPDTLSFADA
LLEKAGGQLSTWSSTNRGGFVVTALAEVPSTGAAVREELGTKAARARLVK
EATEGNNMGTKVLAERLGFGDFGAKDAAAKKRRRPGKKTR*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1331:5436..16163-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1331.2005.1 ID=mRNA_E-siliculosus-1a_F_contig1331.2005.1|Name=mRNA_E-siliculosus-1a_F_contig1331.2005.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10728bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1331:5436..16163- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACGCGGGACGTGGTGGTGGCGGAAGAGGCCGCGGCGATAGAGGAGG CAGAGGCAGAGGAAGAGGAGGAGGGCGTGGAAACAGCTCCGATCGAGGTG GTGGCCGTGGTGGCCGTGGTGGCCGTGGGAGGGGCGGCGGCCGCGGAGCA GGGAGAGGTGAAGGTCGGGGGCGTGGCAGTGGTGGGCGCTCGAACGGTGC TGCCGCCAAGGATGAAAACACGAAGCCTAACTCTGCCGATGGTGGAGACG GCAAGCGAAAGCGGTCCTCCGACAGCAAGGGAGCTGGCGGTAGAGGCAGG GGCCGCGGGCGTGGTGGAGGGAAGGCGGGCGGCGGGAGAGGGAGCAACAA GAAAGAGAGTGGTGGCGGTGGAGAGGAAGACAAGGGTCCAGCGAACAAGA AGCGGAAGCTCAAGCTCGAACGGCAGCAGCAACGCCCTCAGTTCAACACC GTGAAGAGGTCGAAGGAGATCTGGAACAAGCTAAGGGAGCGCAAGGTGAA ACGGCATGTAGACTACAACGCTTTAGGGTAGGGAACGGGCACCAGTTCAG CAAGTGTTGGGATCCCAAGATACCGCTGCGTCGTAGCATGATATCTTGGC ACACGTGCTGTTCTGTGCTGTTCGGTCGGCTTGTCGTATAGAGTGTTGTT CGGCTACACTTATGCCCACAGGCGTTCGCCACTGCAAGAGCAGTCACATC GGACCACTTAGGTTATACCTCACCCGACGAGGGGGGCTGCGTGTCCTTTC GGGAGTGCCAGACACTCCGCGCCAGAGCTCATGTCTTCGAGTGTGCTCTC GTGGATATCTTGCCGGCACCGTTTCTCCCTCGGTACATACCGTTTCCTCG CGGCACGCCGTAACCCACAACATGCTGCACAAGCATGATGCCCCTGCGTG TTTTCCGATGAGTTTTTTGCAAGCTACAACCCAATTCTCGTTCCTATTCT GCCACAGCAGCCCCACCGCAGCTGGTGTTGACCATCCCGTGCGTAGCCTA TCTGTCGCCGCCACGCTGCTTTTGACGCTGCTGGTGTTGCGTGGTGTGGG ATACGTTCACCGCACGTAAATTGCACAGCAGTAGCTGACGCGTAATTTGC TTTTCTAGGATCAATCAGTGCCGGGCGCTTATTTTTCTGTAACCTCTCTT GCTTTCGCGCGGCACGCTGCGGAGAGCGTACCCGCCCTTAACTCTAGGAC ACTACTATTCACTGCTGTACTAATGCTGCTGCTGCTGCTGCTGCTGCTGC CGTTGCTGACGTTCGGGTGGTGGTATTCTTGCTCCTGTTCGCGTGTAGGT GCCCCCCGAAGAGCGAGCGAAGCTTGTGCAAGAGCTGCTGCAACTGATCA AGGGGAAGGTGATGGACATCGCGCTCAAGCACGACGCCAGCAGGGTGGTG CAGACCGCGCTGCAGTTCGGGAACCAAGAGGTGCGTTGGCGCATCTTCGT TTGCTAGTTCTGATTCACGAAGTTCGCATTATTGTGCAAGCCTAGCCTCT CCACCGGTAAAGTACATACTGTTCACCTGTTGTGCACGTGCGTCTCCGTT GTTGACTTCATGACGAAGTTATCCTCGTCCCGAGAAACAAGCCCAATTTA TTCCTCTGCCCTTTTTACGCCACGACACGGGTCCCCCTTCCCCTCGCGGA GCCCATGACTAAGACCGCTTGGTTGAAGCTATTCACAGCTTTGTAGACAC TTGCCGTCGTCAACGATGCCCACCCTTTGTCTTCTCTTGCGTGACAAATC TAACCCCAGGTCATAATAGTAGTTCCACATGAGAGAAGAACCGAGAGTTT TCGGAGGGGATGGAACCTTGAGGGTAGACATGAGTGCAGCAACTACCAAA AATGCCATCATGTACACACACGCCAGGGCGGCTTGACGTTCGTGCGTCCC CTTTTCACTCCAACCCAAAGCTACACGCGCACGGTTCGATCGAAAAATGA CACACACCCCTACCCCACCCCTCCCTCCTGCGCCCGTTCGCTCGTTCCCC CTTCCTTCCCATTCGCCTCGGAAAAAAAAAAAAAATGCCTCAGGAGCGCC TGTCCATCCTCACGGAGATCGAGGGGCACATCGCCCAGCTGTCGCAGCTG ACGTACGCGCACTTCATCGTCCTGCGCCTGTTCAAGGAGATCAAGGGCGC CGAGGAGCAGAAGCGCGTGGCCAAGACCTTTAGGGGGCAGACGGTGAAGC TGGCGACCCACGCGATCGGGGCGAGGGTGGTACAGACGGCGCTCGACTCG CTCCCGGTGGCTTCGGCCGCGCTTATCAAGGTCGGTTGGTTGGTTGATGC GGAAACCTCCCTTGTCTTTCTGCGTTCCGTCGCGACGATCGCTTTGTTTG GGAAGTGAAAGTCATACTTCTATAGAAAAGCGATCGTCGTACAAGCTGGG CCAGCCAAGACGCCTACAAAATGGTTGAAAACGATTTACACCACGAGTTT TACGAGTTAGAACCTGAATTTTTGACACGTGGTCGGTATTACAACAACAA AGACCTTGACTGGCCGTCCTTTTTTTTTTTTTTTCACGAGGTAGCCCTAT TAAAGGAAAAATGGCGACCCTATTGTTCGCGATAGTGGGACTAAAAAAAA TAATAATAAAAAGGACGGCCAGTCACGGTCTTCGTTATACTAATACCGAC CACATGTCAAAATTTCAGATCCAAACTCGTAGAAATCGTGATGTATTTGC GATATCCTCATATTTCCTTGCCTATCTTGTGTGTTGTATCGGATTCTTTA CGAAGCCATAACTCTTGATGGAAGATGATGTGAGTCTTGCAACTACCATT ATTTTTCTCGCAATGATCCCAGGTAAGTGTACACCAAATTTCAGCTTATT CTGATAAACTTTTTTTATGCTGATTTCAGTACCTGAGTATCCCCCACTAC GCCGCCTGTTGATCGTTTGGTACCTAAATCAACCCAGATTCGAAAAATTC TGGCACCGGCGCCTCCCCTATTGTCTTATAAGAGAAGCCACCAAGTTTCA AGCCTAAATTCGTCGAAACGATTGCATGAGATGCGAAACAACGAAAGTGA GAGTCGTCCTTGTAGGAGGTGTCCGCGATAAGTTTCACTTTTCTCCACTC TTGCATACAGAACACATGAGTATTTCAAGCCAGTTCTTCGTTCCTCGTAA TGCGGGATTGTACGTACATGGACCGGCGCCATGCTTGTGTAAGTTACAAG AGAATAAAGAATACAAAAGGCGACATGAGGGTGAGGTCTTGGATGTGTGC CCGGGGTTGAGTAGCCATGGGAATCTGATGATGATTCGCAAGCGGTGGGT TACGTGGCTAGACCGGCAATGTTACAGGAGAGGAACGCTTGCGGCGAGCG CGCTTGGATTCCTGCTCCCATTGCGATGAGTGGCCAAAGGCGCTGGAACC CCAGCAAGTTCGTTGCTCCATTGTGTTGTTGTCAAGATTCTGCCCTGAAG TACCGGTACCCTTGAGGTAGAATTGGCTTCGTACTTCGTACCGTTGCGGA AGCTTCGTGGACAGATGCCACACGCACGAGGTTTTATACGCGACCCGAGC AGGCGATTTTTGCTCACCTGTGTATCGTGTTCGACAAACACAAGCTTGAT TTTTTTTTTTTTGTTGCCTGAAGTTTCAACACAACACCCCTTTCTCCGTC ACGTGCGAAAAAAAAAAAAAAAAAAAAAAAACAGTCGGAGTTCTACGGCA AGGAGTACGCCTTGTTCACCGACGACAACCAGCCCCACAGTCTCAAGGCG GTTCTGAAGGCCAGGCCTGACAGGTGACATTTTTTTTTTTATTGCGCTAC AATGTCCCTTGTCTCATCCATCTCCCTTCTACAACCCTCCCCCCTCGGTT TCGATACAGTCGGGGGTATAAGTGACGCCGGTGTACCGGTGAAATCGTGT GGCACAGACGATGGAATCATGTCGTTTCGTGCCCTGAATAGTGCCGGTGC CGCTGAGTGCACTAGCGAGGACCGTCTACAGCAATGCTCGGGAAAATTGG TCCCTACCGGTTCAGCACAGAGCTTGCGAGAAGGCCGCGCAGACCAACTT GAGAAGAATCCTCCCAGATGTGTTGCTTTAATGCTATTGTTTATCCGTCT AGGGGTATGATGCCCACTATGGGAGTCGCTCTGCTCGGTGCCAACTCTGT CAGGCAAGGGGGGACCCGGCCAATCAGTATGCACATACCCCCCGCCCCGT TCCCGCTGAGGCCTCTGGCGGAGTCTATCCGAAGGCCTCACGCTCATATT TTCGCAATTTCTCAAGCTGCAGCTCTGGTTATTTGAAGGCCGTTCAGCTT GTGGCGCATCCACTCATCAATTTTGCGAAACAACTGCAACCGTCGCCTGA CCCCTTGTGTGTGTGTGTTTTTTTTTTCTTTGCATCGACCGCGCCAACCG GCTGACCAATGAAAAGACGTCAGTCTTAGTGTGGTTGAAAACACAAAACA CTTCTATCTGCCATGAACTGGGACCCCGTGAGGGGGCAGCATAAGGAGGC TAAACTATCCTTCGGATCATGTGTGTGTGTGTTTTTGTTGTTGCAGGCGT GCTGTCGTGATGGCCCACGTGAACGGGGTGATTGCAAAGCTGCTGTCCAA GGGCCTCATGAAGTTCGAGTTCGCCCATGACCTGCTCTGGGAGTACATGC AAGAGGCCACGCCTGTGCAGATGCAGGTCGGAGATTTTTTTTGCTGGTGA TTGTTTTCGTCGCAAATCGCTGCATGCATCTGGCGGACGCGTCGCTGCCA CAAGCAGGGACATGACGCTAGTCCGTACGTAGCTAACGGCAAATAGCGAC GCTGATAATGTTCCAACACATCATGCAAGTGGAGGTGGAGTCACACCCCT GTCCCACGACATGCACCCTCTTCCATTAGAACTCGAACGGACAGCGCGAT AGTTGTGCTTTATCTTTTCATTTGTCAGGCTTCATCGATACGGATGCTGG ATTAGCAAAGGGTCTTGCTCCACCTTAACCCCCCCGGCCCCCTCCCACCC CATCCTTTACCCCTATTAATGGTACGGTATTTTACTCTCAGTAGCGTAAG TGGTGCTTCTGCTTTCTTATGGAGTTCCCCAGGAACAGCATCAGCAGTGG CGGCAATAGCACACACACAGACACACACCCTTGATGGTATTTTTCACTTT CGTCCTGTCGGAGATGCCCGAACGTAGGAGTGTTGGCCCTAATATCACTT GAATCGCCCGCCAACCCTGTTTGCTTTTTTTTCACCCGTTTTTCTCAGGA GCTTGTGCCGCAGCTGGTGGACTCGTACATGCTCCTCCTGTCCACCCGCC CCGGGTCAATGGCGGCGGCGATGTGCGCGGCGCACGGGGGCGCCAAGGAG CGCAAGAGGATGATGCGCGCCCTCAAGGGATACGTGTCCGCCTCGCTCAC GCACAGGTACGGAGGGCGGAGAGTAGTGGGGGTCGATGACGGGCCTTGTT TTCCGTCGCTATGTTGAGCGTTTTGGGGCGCTTGGGTTGTTTTGTGGCAG ACTGCGCGGATGTCGTCGAGTGTTGTCCGGTATGTTCAGGGCTACGGGTG CATGCTGGCAGTGTTGTTCTTGTTGTCGTTGTGTTGAGCTTGAAATGGTT TCTCTGGTCCTTTTCCCAGATGGATCTATAATCACGCACGTATGTTTTTG AGCGAGGAACGAATAGCTTCTCGATCACGGACGGTATTTTGGGAACAATA CGCCGTTCTTTCGAGGACGAGTGGTCAATGGTCTAACAGCTAAGGCATGC AAAACATGAGGGCCCCCCCCCCCCCCGTCCGCTTGTTCTTCTTCCTTTAG GGATGCCTACATCGCCGTAATCAGGCTGGTGGAGTCGGTGGACGACACCG TCACCTGCCAGAAGACCATCCTGGCCGAGCTCCTCAAGCCAACAGAGGTG AGAGGCCCCCTAGGTATCGTAGACCCTGCGAAATCATCCGTGTAGCTGGT AGTGCGATGCCGTTCCGTTGGCATGTGTATCATCATCATCAGTCGACAGG CCGTTGACATGTCACGATGGTGTGCGCATGCCTTTTCATGTTTTTTTTTG GCAGGGGTCATCACTACCCGGCTGACCAATTGAAAAGACATCAGCGTGCG AATATTTTTGTGTCTGGATACAAACCGAGACAGCCGCCTATGTAGGACGT GCGGTCTGTACACGTGTTCCTGTTTCTTGCAGGCCGGCTCTGTTTTTCAT TCCCTTCCATCTGTCTTTTGTTGTTTTTTACTTGCCCAGGTCGCGCCGAA GACTACCGCCGCCGGCAACATCGTCCCCAAAGCAGGCAAGGGCACCAGCG CGGAGGAGTGGGTCCCCCGGGGCACTACGGCCCCGAAGGGAAACCCCGAG GGAGGCGTTGCTGCTGCGGGAGATGGTGTTACGGGCATGGATGTAGAGGG AGAGGAGAAGGAGGAGGAAGAGGACGAAGAGGATGAGGACGAAGATGAGG ACGACGAAGAGGACGAGGACGAAGATGAGGACGACGAAGACGAAGAGAAG AAGGAAGAGAAGAAGGAGGAAGGAGATGCGATGGAGGAGGAAGAGGGTGC TGCGGCCGCCCCTCCCCGGCTCCCGCTGGTATACGTGATGCGCCACGCGA ACGGGTGCAAGCTGCTGCTGAGGCTGCTCGCGCCGGACCGCACCGGGTAT GCTTTGACAGACAGATGGCTCGTTGGGGTGGTGGGATATGTGTGTTTGTT GAAAGAGCGTCGACGACCGCGCTGCATACCCCCGGAGGGGCAACGACAAG ACGCCAGTCTTGGGGATAAGAAACGCGTGACGTGTTTTTTCTGTCCGTCG GAGTTTGTGTGTGTGTGTCGGGCGCGCTCTGTGGCTGTCGGGGTGAGTGG TGCCTTGTGTACGATGCCGTGCGAGAGGTGTTAAAAGCTTGGGTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTTTGTGTACGTGTCCATGGTTTGTATCTGCTGCATTTCGACAAAGGG CCTCTTATCTGTATCTACCTATCTCTGTCTAGGACTCTACATTCTGTGTG CACGGGTTGCATTTCGAAAAAGGGCCTCTTATCTGTATCTACCTATCTCT GTCTGGGCGCTACATTCGAGATCGTCATGTTCTTCCCCTCTCATTGATGC TTCTGAGTGAATCTTCCCCCTCTTGCCCCGTGCCCTGTCCCCTCCCAGGT ACCTCCACCCCGAAGAGCTCGAGCTCCTCAAGCCCACCATGGTCCCCTCA CCCGCTGCCGCAAAAGCAGCAGCCGCCGCCACCGGGGACAACGACGACGA CGACGACGAGGGCACCAAGGAAGGGGGGGAGGGGACAGAAGTTCCCCTCG TCCCCTCCTCGAGGAAGGAGGCGTCAGTCAGGAGGAGGGAGCTGTTGGCC TACCTGAGGGAGCCGCTCAGGGAGGCGTGTGCGACTCACGCGCCGATGCT CATGAGGTCCAAGTGCGCCGGGTCGGTGGTTCTGCTGGAGGCTATACGGG TGCGTCTTCTGAATTGTGTCTGCGAGAGTTTGGTTGGTGGTCTGCGGCTA CGTCGTTGTTGTCAAGGGAGGTTCGTGTGTGTGTGTGTGTGTGTGTGTGT CTTTATGATAAGCATCGACCGCGCCAACCGGCTGACCAATGAAAAGACGT CAGTCTTAGTGTGGTTGACAAAACAAAACACTTCTGTCTGCCATGAACTG GGACCTGTGTGTTTTGTTGTCGTACTAGAGGTTGTGGTGGTCACTTGCTG TTTGTTGTCAAGGAAAGGTCGTTGGGCATGTGTTTTGGTTGTTTACTGTT TACTACAAGTACAACGATTTACGGTGCGTGTGTTTCGTAATCCAAGGATC GATCTTAAGTCGTGTTCTTGCGTGCTTGTACTTAATTCACTCAGTCCCTG GCGTTGGGCTATACACAGGCTTCTCGTTGGCGGGCGATCCAAAAGCCCGG CCTCTCTCTCTCTCTGAATCTAAGCACCTGGGACAGCACGTGGACACTTT TTTGACACAACCATGTCTTTGTGGGAACAGAGGGTTGCCGGAGGCGTGAC CGCGCCGGCTATGTACGGCCTGTCCTTTCCCAGAGCCTACGCCCCGTGGT CTGTAGGCTGTAGAGCCCCCAAGCACGGCTAAGGCCTCCATGTTTAGCCA GATTATTAACATGACCCGGCTCCGTTTCGAAATGAATGCGTGGCCAATAG TGTAGAGCCGCGGCTTAGACTTCGGGTCTAGCCAAATTCCAAGCATGAAC CGCGCTCCGTTTCGGAAGGAGTGCGCGGTGGCCCAAGACTGTTGTAGAGC CCCCGAGAACACCTGAGACTTTGGCTGAATTCCAAGCATGGACCGCGTTC CCTTTCGACAGGAGTGCCTGGCTGAGAGTCAGACGGCTTGAGTCTTCGAC GCCGCCTGAGAATCACAATTTTTCTTTTTCCAACCCTGACACGATGTGCC GCCGCCCCGCAGGCCATAGGAACTCCCGAGATTGTCGCCGCCGTGGTGGA GGCTGCGTGCGCCAAGCCGCGCGTGGGGAAGCTGCCCATGCATGAGGTGA GCGCCACCAACGAACGGGGAATGCAGGCGTACGGGTAGCGGCCGCACTTG AGAACCTCGCTCTTGTTTTTGGTCGAGGTACTCAGTGGTGGTTTTGGGCT ATGCATAGATATAAACGTACAAGTAGACCCTGTGTAGTGAAGGGGGTTCT TCACCGGGGTCTAAAAAAAAAAAAAATCGTTCAAGTCAAGATTATTTTCT TTTATTTATTTTCGAGCCTGAAGTTCTCTAACTGCGAAGTCATTGTGTCC GGGCGCTCTCCGTAGCGTACGTAGCCTCTTGTGGTTTTCCCCAGTCTTGC GGTCGTGAGAGCGCCAAGCAGCACTAATGCTGCTGTTGGCGGCATGGTTG AACATGAGCATTCACCACCAGGCAAGCTTTGTTATTGCACTCTGTTCGCA GTGTGTGTGCGTCTGGTGCTGTGGTAGGTTGTCGAAGGTCGAAGCTGTCG CGACCCTTGTGAATGTAGGGGTGAGCAGAGCCTTGGCGAGGATATTTGTC TTGGATTTACTAGGGGTACGAGAGTGGGGTTAAGGATATGTAGGGTTACG AAACCCCTCTCTCCATTTCATAGATGAATATGATCACCGTCGCCAAGACG TTCCGATTTAAGGGGAGGGGAGGGTATCTCGTATTCTTTCGGTCACGGAA GGCGTCTTTGATGATGCTGGGGGCGCTGCCCTTGCAACCCCATTTCGACG ACGAACCTGGTGTTGATTTGCATAAGACTGACGGTGATATTGGTTGTGCT GCTGCTGCTGCTGCTGTTGTTGCTTTTGCTGCTCCGCTGCTGCTTCTGCT GCTGCTGCTGCTGCTACTGCTACTGCTGCTGCTGCTGTTGCTGCTGCCGA AAACCCCACGACGCAACACCACAACAAATATACTTGCATGTAGGACCCTT CGGCCCACCTCTTCATGAAGCAGCTCCTCGAACGAGAGGCCGAGGCCCAG AAGGCAAAAGCCGGAGCAGATTCTGCTGAGGCCACGCCGGACACCCTTTC GTTCGCGGACGCCCTTCTCGAGAAGGCAGGCGGGCAGCTGTCCACCTGGA GTTCTACGAACCGAGGCGGTTTTGTGGTGACCGCTCTTGCGGAGGTGCCC AGCACGGGCGCCGCGGTGCGGGAGGAGCTCGGGACGAAGGCGGCCCGGGC GCGGCTGGTAAAGGAAGCCACGGAAGGCAACAACATGGGAACCAAGGTGT GTATGTCGTCGTGGTAGCCGTCTGGTTGGTGTTGGTGTGTTGATATTGAT GGTGGTGTTGGTGGTGGCGGCGGCGGCGGTGGTGATGTTGTTGTTGTTGG TGGTGTGGTCGTTTGTTGTTGTTGTTTATTGTGGTGGGGTAGTTGTTGTT TGTGTTGTTGTTGTGTTGTTGTTGTGTGAGTTTCCGCTGTTGTTTCTGTT ATCTTAGGTGTCGTAGGCGAGCGTCCCTTTCTTCGAGGAGAGCACCGACG GCGCTCACACGGGCCCCTGAACGAAGACGACATGCCGGTCTCATGAAGCC AGACCGAAACAAAGGAAACCACTATTACACTATACAACCACGGGCCACCT TCTCGGTTAACGCTCCGTACCATCATCAGCCTCGACTCTGTATCGGAGGA CTCGTGGTTGGGGGTGGGGGGGGGGGGGGGGGCCCCCATGGACCGCGGCG GGGGGGGGGGGGGGGGGGGGGGGGCGCCCACGGCCGCGCCCGCCCGGGCG CCTCACCCNNGCTTGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG TACTCATAGTCGTGCATGCCGTAGTCGTTAGACCATTGACCTCGCATCCC TACAAAGCCGGGAAGGAGCACTCGTGGTTGGGGATTTTTATGGTGATGAC TCTTGCGCACCTTTGCTTTGCCACTCTGAACCCGCCGCAACCTCTCCAAA CGCCTGCCGCACGTCGAAAAACTCTAGGTCTTGGCCGAGCGGCTCGGTTT CGGAGATTTCGGCGCGAAAGATGCCGCAGCCAAGAAGCGCAGGCGACCAG GAAAGAAGACGCGTTAATTTCAGGGAGGACAGGAATCGCGTGTGAACTCG GAAGCCGTAAGGCGATTAGCAAGAAATAAGACGAGGGCTTGAGAGGGGCA CTGGAATCGCGTGAACTCGTCCAAGGTGGCGGAGACGGGCAGCTACGGGG GCGGGGTTGTGGTGCACGTGTGTGGGAG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1331:5436..16163-

>mRNA_E-siliculosus-1a_F_contig1331.2005.1 ID=mRNA_E-siliculosus-1a_F_contig1331.2005.1|Name=mRNA_E-siliculosus-1a_F_contig1331.2005.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5046bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1331:5436..16163- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACGCGGGACGTGGTGGTGGCGGAAGAGGCCGCGGCGATAGAGGAGG
CAGAGGCAGAGGAAGAGGAGGAGGGCGTGGAAACAGCTCCGATCGAGGTG
GTGGCCGTGGTGGCCGTGGTGGCCGTGGGAGGGGCGGCGGCCGCGGAGCA
GGGAGAGGTGAAGGTCGGGGGCGTGGCAGTGGTGGGCGCTCGAACGGTGC
TGCCGCCAAGGATGAAAACACGAAGCCTAACTCTGCCGATGGTGGAGACG
GCAAGCGAAAGCGGTCCTCCGACAGCAAGGGAGCTGGCGGTAGAGGCAGG
GGCCGCGGGCGTGGTGGAGGGAAGGCGGGCGGCGGGAGAGGGAGCAACAA
GAAAGAGAGTGGTGGCGGTGGAGAGGAAGACAAGGGTCCAGCGAACAAGA
AGCGGAAGCTCAAGCTCGAACGGCAGCAGCAACGCCCTCAGTTCAACACC
GTGAAGAGGTCGAAGGAGATCTGGAACAAGCTAAGGGAGCGCAAGATGGA
CGCGGGACGTGGTGGTGGCGGAAGAGGCCGCGGCGATAGAGGAGGCAGAG
GCAGAGGAAGAGGAGGAGGGCGTGGAAACAGCTCCGATCGAGGTGGTGGC
CGTGGTGGCCGTGGTGGCCGTGGGAGGGGCGGCGGCCGCGGAGCAGGGAG
AGGTGAAGGTCGGGGGCGTGGCAGTGGTGGGCGCTCGAACGGTGCTGCCG
CCAAGGATGAAAACACGAAGCCTAACTCTGCCGATGGTGGAGACGGCAAG
CGAAAGCGGTCCTCCGACAGCAAGGGAGCTGGCGGTAGAGGCAGGGGCCG
CGGGCGTGGTGGAGGGAAGGCGGGCGGCGGGAGAGGGAGCAACAAGAAAG
AGAGTGGTGGCGGTGGAGAGGAAGACAAGGGTCCAGCGAACAAGAAGCGG
AAGCTCAAGCTCGAACGGCAGCAGCAACGCCCTCAGTTCAACACCGTGAA
GAGGTCGAAGGAGATCTGGAACAAGCTAAGGGAGCGCAAGGTGCCCCCCG
AAGAGCGAGCGAAGCTTGTGCAAGAGCTGCTGCAACTGATCAAGGGGAAG
GTGATGGACATCGCGCTCAAGCACGACGCCAGCAGGGTGGTGCAGACCGC
GCTGCAGTTCGGGAACCAAGAGGTGCCCCCCGAAGAGCGAGCGAAGCTTG
TGCAAGAGCTGCTGCAACTGATCAAGGGGAAGGTGATGGACATCGCGCTC
AAGCACGACGCCAGCAGGGTGGTGCAGACCGCGCTGCAGTTCGGGAACCA
AGAGGAGCGCCTGTCCATCCTCACGGAGATCGAGGGGCACATCGCCCAGC
TGTCGCAGCTGACGTACGCGCACTTCATCGTCCTGCGCCTGTTCAAGGAG
ATCAAGGGCGCCGAGGAGCAGAAGCGCGTGGCCAAGACCTTTAGGGGGCA
GACGGTGAAGCTGGCGACCCACGCGATCGGGGCGAGGGTGGTACAGACGG
CGCTCGACTCGCTCCCGGTGGCTTCGGCCGCGCTTATCAAGGAGCGCCTG
TCCATCCTCACGGAGATCGAGGGGCACATCGCCCAGCTGTCGCAGCTGAC
GTACGCGCACTTCATCGTCCTGCGCCTGTTCAAGGAGATCAAGGGCGCCG
AGGAGCAGAAGCGCGTGGCCAAGACCTTTAGGGGGCAGACGGTGAAGCTG
GCGACCCACGCGATCGGGGCGAGGGTGGTACAGACGGCGCTCGACTCGCT
CCCGGTGGCTTCGGCCGCGCTTATCAAGTCGGAGTTCTACGGCAAGGAGT
ACGCCTTGTTCACCGACGACAACCAGCCCCACAGTCTCAAGGCGGTTCTG
AAGGCCAGGCCTGACAGTCGGAGTTCTACGGCAAGGAGTACGCCTTGTTC
ACCGACGACAACCAGCCCCACAGTCTCAAGGCGGTTCTGAAGGCCAGGCC
TGACAGGCGTGCTGTCGTGATGGCCCACGTGAACGGGGTGATTGCAAAGC
TGCTGTCCAAGGGCCTCATGAAGTTCGAGTTCGCCCATGACCTGCTCTGG
GAGTACATGCAAGAGGCCACGCCTGTGCAGATGCAGGCGTGCTGTCGTGA
TGGCCCACGTGAACGGGGTGATTGCAAAGCTGCTGTCCAAGGGCCTCATG
AAGTTCGAGTTCGCCCATGACCTGCTCTGGGAGTACATGCAAGAGGCCAC
GCCTGTGCAGATGCAGGAGCTTGTGCCGCAGCTGGTGGACTCGTACATGC
TCCTCCTGTCCACCCGCCCCGGGTCAATGGCGGCGGCGATGTGCGCGGCG
CACGGGGGCGCCAAGGAGCGCAAGAGGATGATGCGCGCCCTCAAGGGATA
CGTGTCCGCCTCGCTCACGCACAGGAGCTTGTGCCGCAGCTGGTGGACTC
GTACATGCTCCTCCTGTCCACCCGCCCCGGGTCAATGGCGGCGGCGATGT
GCGCGGCGCACGGGGGCGCCAAGGAGCGCAAGAGGATGATGCGCGCCCTC
AAGGGATACGTGTCCGCCTCGCTCACGCACAGGGATGCCTACATCGCCGT
AATCAGGCTGGTGGAGTCGGTGGACGACACCGTCACCTGCCAGAAGACCA
TCCTGGCCGAGCTCCTCAAGCCAACAGAGGGATGCCTACATCGCCGTAAT
CAGGCTGGTGGAGTCGGTGGACGACACCGTCACCTGCCAGAAGACCATCC
TGGCCGAGCTCCTCAAGCCAACAGAGGTCGCGCCGAAGACTACCGCCGCC
GGCAACATCGTCCCCAAAGCAGGCAAGGGCACCAGCGCGGAGGAGTGGGT
CCCCCGGGGCACTACGGCCCCGAAGGGAAACCCCGAGGGAGGCGTTGCTG
CTGCGGGAGATGGTGTTACGGGCATGGATGTAGAGGGAGAGGAGAAGGAG
GAGGAAGAGGACGAAGAGGATGAGGACGAAGATGAGGACGACGAAGAGGA
CGAGGACGAAGATGAGGACGACGAAGACGAAGAGAAGAAGGAAGAGAAGA
AGGAGGAAGGAGATGCGATGGAGGAGGAAGAGGGTGCTGCGGCCGCCCCT
CCCCGGCTCCCGCTGGTATACGTGATGCGCCACGCGAACGGGTGCAAGCT
GCTGCTGAGGCTGCTCGCGCCGGACCGCACCGGGTCGCGCCGAAGACTAC
CGCCGCCGGCAACATCGTCCCCAAAGCAGGCAAGGGCACCAGCGCGGAGG
AGTGGGTCCCCCGGGGCACTACGGCCCCGAAGGGAAACCCCGAGGGAGGC
GTTGCTGCTGCGGGAGATGGTGTTACGGGCATGGATGTAGAGGGAGAGGA
GAAGGAGGAGGAAGAGGACGAAGAGGATGAGGACGAAGATGAGGACGACG
AAGAGGACGAGGACGAAGATGAGGACGACGAAGACGAAGAGAAGAAGGAA
GAGAAGAAGGAGGAAGGAGATGCGATGGAGGAGGAAGAGGGTGCTGCGGC
CGCCCCTCCCCGGCTCCCGCTGGTATACGTGATGCGCCACGCGAACGGGT
GCAAGCTGCTGCTGAGGCTGCTCGCGCCGGACCGCACCGGGTACCTCCAC
CCCGAAGAGCTCGAGCTCCTCAAGCCCACCATGGTCCCCTCACCCGCTGC
CGCAAAAGCAGCAGCCGCCGCCACCGGGGACAACGACGACGACGACGACG
AGGGCACCAAGGAAGGGGGGGAGGGGACAGAAGTTCCCCTCGTCCCCTCC
TCGAGGAAGGAGGCGTCAGTCAGGAGGAGGGAGCTGTTGGCCTACCTGAG
GGAGCCGCTCAGGGAGGCGTGTGCGACTCACGCGCCGATGCTCATGAGGT
CCAAGTGCGCCGGGTCGGTGGTTCTGCTGGAGGCTATACGGGTACCTCCA
CCCCGAAGAGCTCGAGCTCCTCAAGCCCACCATGGTCCCCTCACCCGCTG
CCGCAAAAGCAGCAGCCGCCGCCACCGGGGACAACGACGACGACGACGAC
GAGGGCACCAAGGAAGGGGGGGAGGGGACAGAAGTTCCCCTCGTCCCCTC
CTCGAGGAAGGAGGCGTCAGTCAGGAGGAGGGAGCTGTTGGCCTACCTGA
GGGAGCCGCTCAGGGAGGCGTGTGCGACTCACGCGCCGATGCTCATGAGG
TCCAAGTGCGCCGGGTCGGTGGTTCTGCTGGAGGCTATACGGGCCATAGG
AACTCCCGAGATTGTCGCCGCCGTGGTGGAGGCTGCGTGCGCCAAGCCGC
GCGTGGGGAAGCTGCCCATGCATGAGGCCATAGGAACTCCCGAGATTGTC
GCCGCCGTGGTGGAGGCTGCGTGCGCCAAGCCGCGCGTGGGGAAGCTGCC
CATGCATGAGGACCCTTCGGCCCACCTCTTCATGAAGCAGCTCCTCGAAC
GAGAGGCCGAGGCCCAGAAGGCAAAAGCCGGAGCAGATTCTGCTGAGGCC
ACGCCGGACACCCTTTCGTTCGCGGACGCCCTTCTCGAGAAGGCAGGCGG
GCAGCTGTCCACCTGGAGTTCTACGAACCGAGGCGGTTTTGTGGTGACCG
CTCTTGCGGAGGTGCCCAGCACGGGCGCCGCGGTGCGGGAGGAGCTCGGG
ACGAAGGCGGCCCGGGCGCGGCTGGTAAAGGAAGCCACGGAAGGCAACAA
CATGGGAACCAAGGACCCTTCGGCCCACCTCTTCATGAAGCAGCTCCTCG
AACGAGAGGCCGAGGCCCAGAAGGCAAAAGCCGGAGCAGATTCTGCTGAG
GCCACGCCGGACACCCTTTCGTTCGCGGACGCCCTTCTCGAGAAGGCAGG
CGGGCAGCTGTCCACCTGGAGTTCTACGAACCGAGGCGGTTTTGTGGTGA
CCGCTCTTGCGGAGGTGCCCAGCACGGGCGCCGCGGTGCGGGAGGAGCTC
GGGACGAAGGCGGCCCGGGCGCGGCTGGTAAAGGAAGCCACGGAAGGCAA
CAACATGGGAACCAAGGTCTTGGCCGAGCGGCTCGGTTTCGGAGATTTCG
GCGCGAAAGATGCCGCAGCCAAGAAGCGCAGGCGACCAGGAAAGAAGACG
CGTTAAGTCTTGGCCGAGCGGCTCGGTTTCGGAGATTTCGGCGCGAAAGA
TGCCGCAGCCAAGAAGCGCAGGCGACCAGGAAAGAAGACGCGTTAA
back to top