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Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1020.196.1 vs. uniprot
Match: D8LQ91_ECTSI (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ91_ECTSI) HSP 1 Score: 679 bits (1753), Expect = 3.640e-240 Identity = 372/425 (87.53%), Postives = 376/425 (88.47%), Query Frame = 1 Query: 1 GHSLGAGTAILLKILLERNATEALMRGFRLAKDKTAAKTARLDVGRPVRVECYAFAPPPVFSVPGATWMRDVYSFVNG---------------------ADCVPTMSLGSLYSLCRTIQHVDKLPLDVYKRAEFVLDSRVRVQQSEQGLGAAGNEDGRRKIASDILGLREHPSLAFLAGDAYDISDDEYDXXXXXXXXXXXXXXXXXXXXXXXXXXATEENEDSTSIGSYLSAIRAQVVRSTISKFGEEWARFTQDVGEATESLLAAVNTAGSSAESLYKDVSRVTDGVRSMSSDEVALTLLLLKQLAAGGGPSPDEMLPMVERCEREGVRPQGGKRRSSDTMTVGDLIIPGVVFLLEGWDAGSESSAGKDGLVTVRKTSAEELGGIRLNSSMMADHAMGAYEPAILGAALKYRKRKRQADRKGH 1212
GHSLGAGTAILLKILLERNA EAL GFRLAKDKTAAKTARLDVGRPVRVECYAFAPPPVFSVPGATWMRDVYSFVNG ADCVPTMSLGSLYSLCRTIQHVDKLPLDVYKRAEFVLDSRVRVQQSEQGLGAAGNED RRKIASDILGLR HPSLAFLAGDAYDI+DDEYDXXXXXXX TEE EDSTSIGSYLSAIRAQVVRSTISKFG+EWARFTQDVGEATESLLAAVNTAGSSAESLYKDVSRVTDGVRSMSSDEVALTLLLLKQLA GGGPSPDEMLPMVERCEREGVRP+GGKRRSSDTMTVGDLI PGVVFLLEGWDAGSESSAGKDGLVTVRKTS+EELGGIRLNSSMMADHAMGAYEPAILGAALKYRKRKRQADRKGH
Sbjct: 276 GHSLGAGTAILLKILLERNAMEALKGGFRLAKDKTAAKTARLDVGRPVRVECYAFAPPPVFSVPGATWMRDVYSFVNGLMQHPLSRAIARRWFWRRHDRADCVPTMSLGSLYSLCRTIQHVDKLPLDVYKRAEFVLDSRVRVQQSEQGLGAAGNEDDRRKIASDILGLRAHPSLAFLAGDAYDIADDEYDXXXXXXXAGSKLPEEVIGGEQGEDQ-GTEEKEDSTSIGSYLSAIRAQVVRSTISKFGQEWARFTQDVGEATESLLAAVNTAGSSAESLYKDVSRVTDGVRSMSSDEVALTLLLLKQLATGGGPSPDEMLPMVERCEREGVRPKGGKRRSSDTMTVGDLINPGVVFLLEGWDAGSESSAGKDGLVTVRKTSSEELGGIRLNSSMMADHAMGAYEPAILGAALKYRKRKRQADRKGH 699
BLAST of mRNA_E-siliculosus-1a_F_contig1020.196.1 vs. uniprot
Match: A0A7S1AQP4_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AQP4_NOCSC) HSP 1 Score: 65.1 bits (157), Expect = 7.950e-8 Identity = 43/132 (32.58%), Postives = 70/132 (53.03%), Query Frame = 1 Query: 1 GHSLGAGTAILLKILLERNATEALMRGFRLAKDKTAAKTARLDVGRPVRVECYAFAPPPVFSVPGAT--WMR-DVYSFVNGADCVPTMSLGSLYSLCRTIQHVDKLPLDVYKRAEFVL--DSRVRVQQSEQG 381
GHSLGAGTA+L+ ++L + G+ +A GR C+AFA PPVF P W ++++FV+ D +P + L +++SLC+ + VD++ + +RA F+ D+ RVQ + G
Sbjct: 217 GHSLGAGTAVLVMLMLCGES------GY----------SAPFSAGR--NTTCWAFAAPPVFGPPEKIPRWTSSNIFAFVHHVDMIPRLGLAAVFSLCQAEKIVDEMDISASERASFLFNYDTSFRVQLPDHG 330
BLAST of mRNA_E-siliculosus-1a_F_contig1020.196.1 vs. uniprot
Match: A0A553P330_TIGCA (Lipase_3 domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P330_TIGCA) HSP 1 Score: 60.1 bits (144), Expect = 4.260e-6 Identity = 47/156 (30.13%), Postives = 73/156 (46.79%), Query Frame = 1 Query: 1 GHSLGAGTAILLKILLERNATEALMRGFRLAKDKTAAKTARLDVGRPVRVECYAFAPPPVFSVPGATW--MRDVYS-FVNGADCVPTMSLGSLYSLCRTIQHVDKLPLDVYKRAEFVLDSRVRVQQSEQGLGAAGNEDGRRKIASDILGLREHPSL 459
GHSLGAGTA LL +++ + K+K K ++C A APPPV+ M+D + ++N DCVP M LGS+ L ++ VDKL ++ KR +F + +++Q A + ++I D EHP +
Sbjct: 392 GHSLGAGTAELLTMVILKE------------KEKYVPKE--------TEIQCVAIAPPPVYRTDSQVPKDMKDAINIYINNQDCVPRMCLGSIAKLLAMVRAVDKLNIE--KRDQFKVFIGYDDDETKQNF--ARIQSVIQEIKQDRFPFLEHPGI 523
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 1215 |
| Model size | 1215 |
| Exons | 3 |
| Ec32 ortholog | Ec-26_005700.1 |
| Ec32 ortholog description | Fungal lipase-like domain |
| Hectar predicted targeting category | other localisation |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | S |
| EggNOG OGs | KOG2088@1,KOG2088@2759 |
| EggNOG free text desc. | retrograde trans-synaptic signaling by lipid |
| Seed eggNOG ortholog | 2880.D8LQ91 |
| Seed ortholog evalue | 5.2e-194 |
| Seed ortholog score | 683.7 |
| Taxonomic scope | Eukaryota |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1020.196.1 >prot_E-siliculosus-1a_F_contig1020.196.1 ID=prot_E-siliculosus-1a_F_contig1020.196.1|Name=mRNA_E-siliculosus-1a_F_contig1020.196.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=405bp
GHSLGAGTAILLKILLERNATEALMRGFRLAKDKTAAKTARLDVGRPVRV
ECYAFAPPPVFSVPGATWMRDVYSFVNGADCVPTMSLGSLYSLCRTIQHV
DKLPLDVYKRAEFVLDSRVRVQQSEQGLGAAGNEDGRRKIASDILGLREH
PSLAFLAGDAYDISDDEYDDDDDEEEQRRSKLPEEVIGGEQEEDQATEEN
EDSTSIGSYLSAIRAQVVRSTISKFGEEWARFTQDVGEATESLLAAVNTA
GSSAESLYKDVSRVTDGVRSMSSDEVALTLLLLKQLAAGGGPSPDEMLPM
VERCEREGVRPQGGKRRSSDTMTVGDLIIPGVVFLLEGWDAGSESSAGKD
GLVTVRKTSAEELGGIRLNSSMMADHAMGAYEPAILGAALKYRKRKRQAD
RKGH* back to topmRNA from alignment at E-siliculosus-1a_F_contig1020:36613..38861- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1020.196.1 ID=mRNA_E-siliculosus-1a_F_contig1020.196.1|Name=mRNA_E-siliculosus-1a_F_contig1020.196.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2249bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1020:36613..38861- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGGCACAGTCTGGGAGCGGGCACGGCGATCTTGTTGAAGATTCTTCTGGA
GCGAAACGCGACGGAGGCGTTGATGAGAGGCTTCAGACTCGCGAAAGACA
AGACGGCGGCGAAAACGGCAAGGCTCGACGTCGGCCGCCCGGTGCGCGTG
GAGTGCTACGCCTTCGCGCCGCCGCCGGTGTTCTCGGTGCCTGGGGCAAC
ATGGATGCGGGACGTGTACTCCTTCGTCAACGGGTGAGCCAAAGTGGTAA
AGTCTTGCATTGCTTTCACGACACGCACTCCCTTGGGGGGGCCAAGTAGG
GAAGGGCGAAAAAATCGCGGCCTACACGTGGCTTGCACGAGGGGCAGCCA
GTCCATCCCCCAGGTTGTGTCCTCCACCCCCGAAACGATTGATTTTGTAT
ACCACCTGGTGGTTTTTCGCCCCAGCAGTGATTTGGTTGGATCTATGTTT
TGTCGCACTAGCAGGAGATCAGAGACGGAGTGCGTTCGAGTAGGGGCTTA
CGGCAAGCATGTCGTCGGTCGTGCTTGCGACGTGCTCTTTTTGTGCGCAA
ACCGGACCCGCGGAGGTCAAACGACAGCGATGTCTTATTTGTTGCTGATG
CCGGTTGCTATAGCAACCCTTGAGCAGCGCTAGCGAGAGTCACAACTTAT
GGTGGACAATGTTCGTCACGAGAATGGCTGCCGTCAGCGGTCTGGCCGTT
TGTTTGGCAGTTTCGAATTTTTTCACGCAACCCTGTGTATAGGCCATGGC
CCATACCATGTTCGAATCGCATGGGAATGTTAAGACCATCAAAGTTGCTT
TCTCTGATGACCCCTCCTCCAAGCGAAACACATCTGTCAGCTTGATGCAA
CACCCCCTTTCCCGTGCGATTGCACGTCGGTGGTTTTGGCGGCGTCACGA
TAGGGCTGATTGCGTTCCAACCATGAGCCTGGGATCGCTTTACAGCTTGT
GCCGAACGATCCAACACGTCGACAAGCTCCCGCTGGACGTCTACAAGCGG
GCTGAGTTCGTGCTGGACTCTCGGGTGCGCGTTCAGCAGAGCGAGCAAGG
GCTCGGGGCGGCGGGGAACGAGGATGGCAGACGTGAGCGAGCAACGACTC
GTTTTTTTGTTTTGTCACTTCGAAAGTTGTTGGTGTTTCGGTTTCCGTCC
ACCAAGAACACCCTGCCATTCGCATTTGACTCGCTGCTGTGTGTGCCCAG
ATGAGAACAGGCGGTCACATATTTGATGCGGGAGGGTAGAGACAGCAATG
TGCGACGAAGGATGCTTGCAGTCTATAGGACGAAATCTCATGCGGGTCTG
TGCACACTTATTTACACCTGTCAAACGCCTTCGAGGGTGACATAGAGTTG
ACGAAGGACGATCACGTATCACTCTCATGGCACCCTGTGCTAACTGCTGC
CGTGATTCCCTCCCCACGCGAAACCCTACCGCCGGACGGGAAACAGGCAA
GATCGCAAGCGACATCCTGGGACTGCGCGAGCACCCTTCCCTCGCGTTCC
TCGCTGGCGACGCTTACGACATCTCCGACGATGAGTACGATGATGATGAC
GACGAAGAGGAACAAAGAAGAAGCAAGCTCCCTGAGGAGGTCATTGGCGG
CGAACAAGAGGAGGACCAAGCGACGGAAGAGAACGAAGACAGCACGAGCA
TCGGCAGCTACCTCAGCGCCATCAGGGCGCAAGTCGTTCGGAGCACGATC
TCCAAGTTCGGGGAGGAGTGGGCGAGGTTCACGCAGGACGTGGGGGAGGC
CACCGAGAGCCTGCTCGCCGCCGTAAACACGGCGGGATCCTCGGCGGAAA
GCCTCTACAAGGACGTCAGCCGCGTCACGGACGGCGTACGCAGCATGTCG
TCCGACGAGGTCGCCCTGACTCTCTTGCTCCTCAAGCAGCTAGCGGCGGG
GGGTGGACCCTCCCCGGATGAGATGCTCCCCATGGTCGAGAGATGCGAAC
GGGAAGGGGTTAGGCCGCAAGGGGGCAAGCGCCGTTCCTCCGACACGATG
ACGGTCGGAGATCTGATCATCCCGGGCGTCGTGTTCTTGTTGGAAGGGTG
GGATGCGGGAAGCGAGTCTTCGGCCGGAAAGGACGGCTTGGTGACGGTGC
GGAAGACGAGCGCGGAAGAGCTGGGAGGCATCCGCCTCAACAGCAGCATG
ATGGCCGACCATGCCATGGGTGCCTACGAACCCGCAATTCTCGGAGCGGC
GCTGAAATACCGGAAACGAAAGCGCCAAGCGGACAGGAAGGGGCATTGA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1020:36613..38861- >mRNA_E-siliculosus-1a_F_contig1020.196.1 ID=mRNA_E-siliculosus-1a_F_contig1020.196.1|Name=mRNA_E-siliculosus-1a_F_contig1020.196.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2430bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1020:36613..38861- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGGCACAGTCTGGGAGCGGGCACGGCGATCTTGTTGAAGATTCTTCTGGA
GCGAAACGCGACGGAGGCGTTGATGAGAGGCTTCAGACTCGCGAAAGACA
AGACGGCGGCGAAAACGGCAAGGCTCGACGTCGGCCGCCCGGTGCGCGTG
GAGTGCTACGCCTTCGCGCCGCCGCCGGTGTTCTCGGTGCCTGGGGCAAC
ATGGATGCGGGACGTGTACTCCTTCGTCAACGGGGGCACAGTCTGGGAGC
GGGCACGGCGATCTTGTTGAAGATTCTTCTGGAGCGAAACGCGACGGAGG
CGTTGATGAGAGGCTTCAGACTCGCGAAAGACAAGACGGCGGCGAAAACG
GCAAGGCTCGACGTCGGCCGCCCGGTGCGCGTGGAGTGCTACGCCTTCGC
GCCGCCGCCGGTGTTCTCGGTGCCTGGGGCAACATGGATGCGGGACGTGT
ACTCCTTCGTCAACGGGGCTGATTGCGTTCCAACCATGAGCCTGGGATCG
CTTTACAGCTTGTGCCGAACGATCCAACACGTCGACAAGCTCCCGCTGGA
CGTCTACAAGCGGGCTGAGTTCGTGCTGGACTCTCGGGTGCGCGTTCAGC
AGAGCGAGCAAGGGCTCGGGGCGGCGGGGAACGAGGATGGCAGACGGCTG
ATTGCGTTCCAACCATGAGCCTGGGATCGCTTTACAGCTTGTGCCGAACG
ATCCAACACGTCGACAAGCTCCCGCTGGACGTCTACAAGCGGGCTGAGTT
CGTGCTGGACTCTCGGGTGCGCGTTCAGCAGAGCGAGCAAGGGCTCGGGG
CGGCGGGGAACGAGGATGGCAGACGCAAGATCGCAAGCGACATCCTGGGA
CTGCGCGAGCACCCTTCCCTCGCGTTCCTCGCTGGCGACGCTTACGACAT
CTCCGACGATGAGTACGATGATGATGACGACGAAGAGGAACAAAGAAGAA
GCAAGCTCCCTGAGGAGGTCATTGGCGGCGAACAAGAGGAGGACCAAGCG
ACGGAAGAGAACGAAGACAGCACGAGCATCGGCAGCTACCTCAGCGCCAT
CAGGGCGCAAGTCGTTCGGAGCACGATCTCCAAGTTCGGGGAGGAGTGGG
CGAGGTTCACGCAGGACGTGGGGGAGGCCACCGAGAGCCTGCTCGCCGCC
GTAAACACGGCGGGATCCTCGGCGGAAAGCCTCTACAAGGACGTCAGCCG
CGTCACGGACGGCGTACGCAGCATGTCGTCCGACGAGGTCGCCCTGACTC
TCTTGCTCCTCAAGCAGCTAGCGGCGGGGGGTGGACCCTCCCCGGATGAG
ATGCTCCCCATGGTCGAGAGATGCGAACGGGAAGGGGTTAGGCCGCAAGG
GGGCAAGCGCCGTTCCTCCGACACGATGACGGTCGGAGATCTGATCATCC
CGGGCGTCGTGTTCTTGTTGGAAGGGTGGGATGCGGGAAGCGAGTCTTCG
GCCGGAAAGGACGGCTTGGTGACGGTGCGGAAGACGAGCGCGGAAGAGCT
GGGAGGCATCCGCCTCAACAGCAGCATGATGGCCGACCATGCCATGGGTG
CCTACGAACCCGCAATTCTCGGAGCGGCGCTGAAATACCGGAAACGAAAG
CGCCAAGCGGACAGGAAGGGGCATTGAGCAAGATCGCAAGCGACATCCTG
GGACTGCGCGAGCACCCTTCCCTCGCGTTCCTCGCTGGCGACGCTTACGA
CATCTCCGACGATGAGTACGATGATGATGACGACGAAGAGGAACAAAGAA
GAAGCAAGCTCCCTGAGGAGGTCATTGGCGGCGAACAAGAGGAGGACCAA
GCGACGGAAGAGAACGAAGACAGCACGAGCATCGGCAGCTACCTCAGCGC
CATCAGGGCGCAAGTCGTTCGGAGCACGATCTCCAAGTTCGGGGAGGAGT
GGGCGAGGTTCACGCAGGACGTGGGGGAGGCCACCGAGAGCCTGCTCGCC
GCCGTAAACACGGCGGGATCCTCGGCGGAAAGCCTCTACAAGGACGTCAG
CCGCGTCACGGACGGCGTACGCAGCATGTCGTCCGACGAGGTCGCCCTGA
CTCTCTTGCTCCTCAAGCAGCTAGCGGCGGGGGGTGGACCCTCCCCGGAT
GAGATGCTCCCCATGGTCGAGAGATGCGAACGGGAAGGGGTTAGGCCGCA
AGGGGGCAAGCGCCGTTCCTCCGACACGATGACGGTCGGAGATCTGATCA
TCCCGGGCGTCGTGTTCTTGTTGGAAGGGTGGGATGCGGGAAGCGAGTCT
TCGGCCGGAAAGGACGGCTTGGTGACGGTGCGGAAGACGAGCGCGGAAGA
GCTGGGAGGCATCCGCCTCAACAGCAGCATGATGGCCGACCATGCCATGG
GTGCCTACGAACCCGCAATTCTCGGAGCGGCGCTGAAATACCGGAAACGA
AAGCGCCAAGCGGACAGGAAGGGGCATTGA back to top
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