prot_E-siliculosus-1a_F_contig1311.1903.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1311.1903.1
Unique Nameprot_E-siliculosus-1a_F_contig1311.1903.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length131
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1903.1 vs. uniprot
Match: A0A6H5K1R5_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R5_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 4.180e-63
Identity = 103/112 (91.96%), Postives = 104/112 (92.86%), Query Frame = 0 
Query:   19 FPQATYLPLRLTQHLGGFKDLVALKIYGLPYLNPWQLPGNGMDAFRLAKEATLRALDTPVKKRGWTGSAAATKADDGTSGLPEAVHRGVRVVKVRAQRGQMVDSRGVVRSRL 130
            +  ATYLPLRLTQHLGGF DLVALKI GLPYLNPWQLPGNGMDAFRLAKEATLRALDTPVKKRGWTGS AATKADDGTSGLPEAVH GVRVVKVRAQR QMVDS GVVRSRL
Sbjct:  191 YHHATYLPLRLTQHLGGFTDLVALKINGLPYLNPWQLPGNGMDAFRLAKEATLRALDTPVKKRGWTGSVAATKADDGTSGLPEAVHPGVRVVKVRAQRRQMVDSGGVVRSRL 302
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BLAST of mRNA_E-siliculosus-1a_F_contig1311.1903.1 vs. uniprot
Match: D8LD55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD55_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 3.460e-40
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 
Query:   60 MDAFRLAKEATLRALDTPVKKRGWTGSAAATKADDGTSGLPEAVHRGVRVVKVRAQRGQMVDSRGVVRSRL 130
            MDAFRLAKEATLRALDTPVKKRGWTGSAAATKADDGTSGLPEAVHRGVRVVKVRAQRGQMVDSRGVVRSRL
Sbjct:    1 MDAFRLAKEATLRALDTPVKKRGWTGSAAATKADDGTSGLPEAVHRGVRVVKVRAQRGQMVDSRGVVRSRL 71
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1R5_9PHAE4.180e-6391.96PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LD55_ECTSI3.460e-40100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1311contigE-siliculosus-1a_F_contig1311:32809..33611 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1311.1903.1mRNA_E-siliculosus-1a_F_contig1311.1903.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1311 32809..33611 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1311.1903.1 ID=prot_E-siliculosus-1a_F_contig1311.1903.1|Name=mRNA_E-siliculosus-1a_F_contig1311.1903.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=131bp
MHTLSYFPPGCAVGITHSFPQATYLPLRLTQHLGGFKDLVALKIYGLPYL
NPWQLPGNGMDAFRLAKEATLRALDTPVKKRGWTGSAAATKADDGTSGLP
EAVHRGVRVVKVRAQRGQMVDSRGVVRSRL*
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