prot_E-siliculosus-1a_F_contig1308.1869.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1308.1869.1
Unique Nameprot_E-siliculosus-1a_F_contig1308.1869.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length171
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1869.1 vs. uniprot
Match: A0A6H5L1C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C6_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 1.280e-106
Identity = 165/170 (97.06%), Postives = 166/170 (97.65%), Query Frame = 0
Query:    1 RVSITTCLISILAVPALVMYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGEDCDVRKKPRNKKNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRTLNSAT 170
            RVSITTCLISILAVPALVMYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGED +VRKKPRNK NRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKR  NSAT
Sbjct:  118 RVSITTCLISILAVPALVMYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGEDGEVRKKPRNKTNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRPPNSAT 287          
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1869.1 vs. uniprot
Match: D7FID1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID1_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 8.470e-100
Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 0
Query:   19 MYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGEDCDVRKKPRNKKNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRTLNSAT 170
            MYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGED DVRKKPRNKKNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRT NSAT
Sbjct:    1 MYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGEDGDVRKKPRNKKNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRTPNSAT 152          
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1869.1 vs. uniprot
Match: A0A835ZAD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD4_9STRA)

HSP 1 Score: 121 bits (303), Expect = 5.270e-31
Identity = 71/169 (42.01%), Postives = 95/169 (56.21%), Query Frame = 0
Query:    1 RVSITTCLISILAVPALVMYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGEDCDVRKKPRNKKNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRTLNSA 169
            RVSITTC +S++  P L++ G +SVP++GQ+AV   AL     ST LL+ C  PYV +++EI   G                           R F+ E ++I G  R TEF + +V+P P+  RPFVSFKA  +YYFIQG  + DK LL+ LLGR L D EK +  SA
Sbjct:   64 RVSITTCAMSMIGTPLLLVLGNDSVPLSGQIAVTGVALTAAVGSTALLHWCTRPYVHKLSEITGRGAID----------------------KARLFKAELLSILGRPRVTEFRLGDVQPQPDALRPFVSFKARDNYYFIQGEVLQDKALLKELLGRPLDDSEKSSGTSA 210          
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1869.1 vs. uniprot
Match: W7TRL5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRL5_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.770e-20
Identity = 58/164 (35.37%), Postives = 84/164 (51.22%), Query Frame = 0
Query:    1 RVSITTCLISILAVPALVMYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVF--RMAEIYEGGVAQGEDCDVRKKPRNKKNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHE 162
            RVS+TTC+I + + P  +  G ESVP+A  VA+    L+ T   T+LL+    PY+F  R+A      V    D ++                    F  + ++    R TT F++ +V+P+PN++RPFVSF A    YF+ G    DK LL +LLGR LK  E
Sbjct:  125 RVSLTTCIIGLFSTPFFLTLGSESVPMAANVALTGIVLLATCGPTILLHAFTKPYIFALRVAPF----VTADNDLEISDSGDKSDRAVRRNTTPDMHFSADTIDFLSRRITTSFNLSDVKPLPNSTRPFVSFSARDRLYFVHGETFPDKHLLHSLLGRPLKKSE 284          
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1869.1 vs. uniprot
Match: A0A2D4BZQ4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZQ4_PYTIN)

HSP 1 Score: 53.5 bits (127), Expect = 1.760e-5
Identity = 38/160 (23.75%), Postives = 73/160 (45.62%), Query Frame = 0
Query:    2 VSITTCLISILAVPALVMYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGEDCDVRKKPRNKKNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDH 161
            VS+T+C ++++ +PAL +  ++S  + G+ A+    ++    +T L ++   PYV RM       + + E+                      R   E + +F    TT+F++ +V   P +  P +SF+A    YFI    + D  L++  +G + K H
Sbjct:   80 VSVTSCALTLVGMPALCVLSEQSASIIGKWAMCGTIMLFGLGTTSLYHVLFKPYVMRM------WIDRSEN----------------------RVTAETVTLFARLTTTDFALGDVTRPPKSMHPMISFRAGEXDYFIHPECLQDDDLVKVFMGEDFKVH 211          
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1869.1 vs. uniprot
Match: UPI0009E48F37 (uncharacterized protein LOC110023651 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E48F37)

HSP 1 Score: 53.1 bits (126), Expect = 2.900e-5
Identity = 53/167 (31.74%), Postives = 73/167 (43.71%), Query Frame = 0
Query:    3 SITTCLISILAVPALVMYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGEDCDVRKKPRNKKNRYGMPKLSGRRFRVERMNIFG--VRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRTLN 167
            S++TC +S    P +       + V  + AV S  +V + S+T  L+  VSPYV ++          G D                       F VE M      V RT +FS   V P P T+RPFVSF+A G++YF+ G    +K LL  L  RE + HE    N
Sbjct:  116 SLSTCCLSASLGPVITFMTSPDMNVIVKGAVASTVIVLSASTTAALHWFVSPYVHKLRW------RPGSDS----------------------FEVEMMTWLATYVPRTIKFS--SVRP-PETNRPFVSFRADGNFYFVDGEHCHNKALLARLTPRE-RAHESAFKN 250          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L1C6_9PHAE1.280e-10697.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FID1_ECTSI8.470e-10098.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAD4_9STRA5.270e-3142.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TRL5_9STRA1.770e-2035.37Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A2D4BZQ4_PYTIN1.760e-523.75Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
UPI0009E48F372.900e-531.74uncharacterized protein LOC110023651 n=1 Tax=Phala... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009724TMEM70 familyPFAMPF06979TMEM70coord: 2..60
e-value: 5.4E-6
score: 26.9
coord: 95..155
e-value: 5.5E-5
score: 23.6
IPR009724TMEM70 familyPANTHERPTHR13281UNCHARACTERIZEDcoord: 2..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 2..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1308contigE-siliculosus-1a_F_contig1308:182..1512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1308.1869.1mRNA_E-siliculosus-1a_F_contig1308.1869.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1308 182..1512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1308.1869.1 ID=prot_E-siliculosus-1a_F_contig1308.1869.1|Name=mRNA_E-siliculosus-1a_F_contig1308.1869.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=171bp
RVSITTCLISILAVPALVMYGKESVPVAGQVAVMSAALVGTGSSTLLLNL
CVSPYVFRMAEIYEGGVAQGEDCDVRKKPRNKKNRYGMPKLSGRRFRVER
MNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLL
QTLLGRELKDHEKRTLNSAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009724TMEM70