prot_E-siliculosus-1a_F_contig1306.1864.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1306.1864.1
Unique Nameprot_E-siliculosus-1a_F_contig1306.1864.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length426
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1306.1864.1 vs. uniprot
Match: D7FHS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS7_ECTSI)

HSP 1 Score: 667 bits (1722), Expect = 9.270e-237
Identity = 376/427 (88.06%), Postives = 377/427 (88.29%), Query Frame = 0 
Query:    1 MSALFDDAERFDSLIVVGDTVRRVKDATEEHVGPGAYSPSMAKSKDFGHIGVSTSRRSNMDPPLSPRSTEHQRHVTGSVVRDGVWFHPSPFLAAGPGPGAYSPSIISSDYERGRTAKPSSGAVGRQAWDLRGSAGGIPLSNFRNGFSVSSSMGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMARTAPTRSNKEAASCRPDLHLLARNTYPAPGGVGGRGGDGRSASPGKERRCVSPASAMLSSMRGRAAATTNGNGAAATFGFRSGGMSTDTGSRSLSPKTNRGRSGFAIRGAAGGRYGRGDGIGGVGRGPATFHPISQQXXXXXXXXXX-RQARTTSSGASRGCRSLSPRGRDGGGRPVGGGRVSKATR 426
            MSALFDDAERFDSLIVVGDTVRRVKDATEEHVGPGAYSPSMAKSKDFGHIGVSTSRRSNMDPPLSPRSTEHQRH TGSVVRDGVWFHPSPFLAAGPGPGAYSPSIISSD+ERGRTAKPSSGAVGRQAWDLRGSAGG PLSNFRNGFSVSSSMGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMARTAPTRSNKEAASCRPDLHLL RNTYPAPGGVGGRGGDGRS SPGKERR                                     TDTGSRSLSPK NRGRSGFAIRGAAGGRYGRGDGIGGVG GPATFHPISQQXXXXXXXXXX RQARTTSSGASR CRSLSPRGRD GGRPVGGGR S   R
Sbjct:    1 MSALFDDAERFDSLIVVGDTVRRVKDATEEHVGPGAYSPSMAKSKDFGHIGVSTSRRSNMDPPLSPRSTEHQRHATGSVVRDGVWFHPSPFLAAGPGPGAYSPSIISSDHERGRTAKPSSGAVGRQAWDLRGSAGGTPLSNFRNGFSVSSSMGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMARTAPTRSNKEAASCRPDLHLLGRNTYPAPGGVGGRGGDGRSTSPGKERR-------------------------------------TDTGSRSLSPKANRGRSGFAIRGAAGGRYGRGDGIGGVGHGPATFHPISQQXXXXXXXXXXXRQARTTSSGASRECRSLSPRGRDSGGRPVGGGRASPPLR 390
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BLAST of mRNA_E-siliculosus-1a_F_contig1306.1864.1 vs. uniprot
Match: A0A6H5JYF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF7_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 3.900e-96
Identity = 165/174 (94.83%), Postives = 167/174 (95.98%), Query Frame = 0 
Query:  152 MGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMARTAPTRSNKEAASCRPDLHLLARNTYPAPGGVGGRGGDGRSASPGKERRCVSPASAMLSSMRGRAAATTNGNGAAATFGFRSGGM 325
            MGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQ+RRERSLSFSGTSSTAKAFLSLASSMART PTRSNKEAASCRPDLHLL RNTYPAPGGVGGRGGDGRS  PGKERRCVSPASAMLSS+RGRAAA  NGNGAAATFG RSGGM
Sbjct:    1 MGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQVRRERSLSFSGTSSTAKAFLSLASSMARTNPTRSNKEAASCRPDLHLLTRNTYPAPGGVGGRGGDGRSTFPGKERRCVSPASAMLSSLRGRAAAAANGNGAAATFGLRSGGM 174
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1306.1864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHS7_ECTSI9.270e-23788.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYF7_9PHAE3.900e-9694.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010736Sperm-tail PG-rich repeatPFAMPF07004SHIPPO-rptcoord: 95..104
e-value: 1.3
score: 10.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1306contigE-siliculosus-1a_F_contig1306:27977..34178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1306.1864.1mRNA_E-siliculosus-1a_F_contig1306.1864.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1306 27977..34178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1306.1864.1 ID=prot_E-siliculosus-1a_F_contig1306.1864.1|Name=mRNA_E-siliculosus-1a_F_contig1306.1864.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=426bp
MSALFDDAERFDSLIVVGDTVRRVKDATEEHVGPGAYSPSMAKSKDFGHI
GVSTSRRSNMDPPLSPRSTEHQRHVTGSVVRDGVWFHPSPFLAAGPGPGA
YSPSIISSDYERGRTAKPSSGAVGRQAWDLRGSAGGIPLSNFRNGFSVSS
SMGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPM
TKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMARTAPTRSNKE
AASCRPDLHLLARNTYPAPGGVGGRGGDGRSASPGKERRCVSPASAMLSS
MRGRAAATTNGNGAAATFGFRSGGMSTDTGSRSLSPKTNRGRSGFAIRGA
AGGRYGRGDGIGGVGRGPATFHPISQQQQQQQQQGRGRQARTTSSGASRG
CRSLSPRGRDGGGRPVGGGRVSKATR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010736SHIPPO-rpt