mRNA_E-siliculosus-1a_F_contig102.186.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot
Match: D7FZ53_ECTSI (Ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ53_ECTSI)

HSP 1 Score: 375 bits (962), Expect = 6.360e-127
Identity = 203/224 (90.62%), Postives = 203/224 (90.62%), Query Frame = 1

Query:    1 MFRTVLATIAPRATAASRSRAASG--RCAPFTAFATRRSSLS----SPSPPGGQSLPLDCAAAVTIRYVPRRCSWREMSSASAHVAAPGGGDLAMQGEGGGEGQXXXXXXXXRDARDPVTGEGIWVDEEDEPLDLEKPKKVQKFCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIVRKLPRLDGI 654
            M RTVLATIAPRATAASRSRAASG  RCAPFTAFATRR S S    SPSP GGQSLPLDCAAAVTIR VPRRCSWREMSSASAHVAAPGGGDLAMQGEGGGEGQ        R ARDPVTGEGIWVDEEDEPLDLEKPKKVQKFCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIVRKLPRLD I
Sbjct:    1 MLRTVLATIAPRATAASRSRAASGPGRCAPFTAFATRRPSPSPSRFSPSPQGGQSLPLDCAAAVTIRSVPRRCSWREMSSASAHVAAPGGGDLAMQGEGGGEGQQGEMGSSGRYARDPVTGEGIWVDEEDEPLDLEKPKKVQKFCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIVRKLPRLDDI 224

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot
Match: A0A8J5XMV1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XMV1_DIALT)

HSP 1 Score: 72.0 bits (175), Expect = 3.450e-12
Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 1

Query:  409 KFCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIVRKLP 639
            K  G+VIS  M +++ V VPYW+ V+RL  RI+R++K+MAHDE  S   GDTV L   +  SKRK H +++I+++ P
Sbjct:    5 KLIGQVISAKMQQSVVVKVPYWHVVQRLQMRIVRHTKLMAHDELESRE-GDTVQLKQSRPYSKRKHHKVIEILKRAP 80

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot
Match: W4QJJ8_9BACI (30S ribosomal protein S17 n=6 Tax=Bacillaceae TaxID=186817 RepID=W4QJJ8_9BACI)

HSP 1 Score: 64.3 bits (155), Expect = 2.030e-9
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 1

Query:  412 FCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIV 627
            + G+V+SD MDKTI V V  +   R  GKR+    K  AHDEENSA VGD V +++ +  SK K+  L++IV
Sbjct:    9 YTGRVVSDKMDKTISVLVETYKKDRLYGKRVKYSKKFKAHDEENSAKVGDIVKIMETRPLSKDKRFRLVEIV 80

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot
Match: A0A1D2QTM8_9GAMM (30S ribosomal protein S17 n=1 Tax=Candidatus Endobugula sertula TaxID=62101 RepID=A0A1D2QTM8_9GAMM)

HSP 1 Score: 64.3 bits (155), Expect = 2.370e-9
Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 1

Query:  388 EKPKKVQKFCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKI 624
            E+ KK +   GKV+SD MDKTI V +         GK + + SK+ AHDEENS N+GD V + + +  SK K   L+KI
Sbjct:    7 EQNKKARTLMGKVVSDKMDKTITVLIERRVKHPIYGKYMSKSSKLKAHDEENSCNIGDVVTIAESRPLSKSKTWALVKI 85

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot
Match: A0A7S2GQL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GQL6_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.880e-9
Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = 1

Query:  412 FCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIVR 630
              G V+SD M KT+ VAV  +  V + GKR+    K MAHDEE    +GD V++V CQQ SKRK   + +I+R
Sbjct:  139 LVGTVVSDKMQKTVNVAVDRYRIVPKYGKRLKYTRKFMAHDEEEVCGMGDVVMIVPCQQISKRKHFMVREIIR 211

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot
Match: A0A0S7Z531_9GAMM (30S ribosomal protein S17 n=1 Tax=Gammaproteobacteria bacterium SG8_30 TaxID=1703404 RepID=A0A0S7Z531_9GAMM)

HSP 1 Score: 63.5 bits (153), Expect = 4.790e-9
Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1

Query:  412 FCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIV 627
              G V+S+ MDKTI VAV         GK + R +K++AHDE N  N GDTV +  C+  SKRK  TL+++V
Sbjct:   18 LSGTVVSNKMDKTITVAVERVMKHPTYGKYVRRTTKLLAHDENNECNEGDTVDIAQCRPLSKRKAWTLVRVV 89

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot
Match: UPI00195E68FA (30S ribosomal protein S17 n=3 Tax=Gracilibacillus TaxID=74385 RepID=UPI00195E68FA)

HSP 1 Score: 63.2 bits (152), Expect = 5.320e-9
Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 1

Query:  412 FCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIV 627
            + G+V+SD MDKTI V V  + +    GKR+    K  AHDE N+A +GD V +++ + +SK K+  LL++V
Sbjct:   10 YTGRVVSDKMDKTITVVVETYKFHNLYGKRVKYSKKFKAHDENNTAKIGDIVRIMETRPQSKTKRFRLLEVV 81

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot
Match: A0A4D6WZL6_9FLOR (30S ribosomal protein S17, chloroplastic n=1 Tax=Plumaria plumosa TaxID=189642 RepID=A0A4D6WZL6_9FLOR)

HSP 1 Score: 62.8 bits (151), Expect = 6.050e-9
Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 1

Query:  400 KVQKFCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIVRKL 636
            K +K  G V+S+NM+KTI VAV      ++ GK  I+ +K  AHDE N+ N+GD V + + +  SK K   L+K++RK+
Sbjct:    2 KQKKTFGMVVSNNMNKTIVVAVKKQVSHKKYGKIFIKTNKYYAHDENNTCNIGDIVQIQETRPLSKNKHWMLIKLIRKI 80

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot
Match: A0A651GBH4_9BACT (30S ribosomal protein S17 n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A651GBH4_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 7.270e-9
Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 1

Query:  418 GKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIV 627
            GKV+SD MDK+I VAV         GK I + +K MAHDE N AN GDTV+++  +  SKRK   L+ I+
Sbjct:   14 GKVVSDRMDKSITVAVDRQIKHPIYGKFITKTTKYMAHDENNDANTGDTVLIMSTRPLSKRKSWRLVDII 83

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot
Match: A0A1G0F8I5_9GAMM (30S ribosomal protein S17 n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_13 TaxID=1798271 RepID=A0A1G0F8I5_9GAMM)

HSP 1 Score: 62.4 bits (150), Expect = 9.680e-9
Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 1

Query:  385 LEKPKKVQKFCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIVRKL 636
            + + K+V+   GKVIS+ MDKTI VA+      R   K + R +K+ AHDE+N+  +GD V +V+ + KSK K   L ++V ++
Sbjct:    1 MTEQKRVKTLTGKVISNKMDKTIVVAIERQVTHRLYKKSVKRTTKIHAHDEDNTCEIGDIVKIVETRPKSKTKAWALAEVVERI 84

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig102.186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7FZ53_ECTSI	6.360e-127	90.63	Ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=287...	[more]
A0A8J5XMV1_DIALT	3.450e-12	46.75	Uncharacterized protein n=1 Tax=Diacronema lutheri...	[more]
W4QJJ8_9BACI	2.030e-9	47.22	30S ribosomal protein S17 n=6 Tax=Bacillaceae TaxI...	[more]
A0A1D2QTM8_9GAMM	2.370e-9	44.30	30S ribosomal protein S17 n=1 Tax=Candidatus Endob...	[more]
A0A7S2GQL6_9STRA	3.880e-9	46.58	Hypothetical protein (Fragment) n=1 Tax=Helicothec...	[more]
A0A0S7Z531_9GAMM	4.790e-9	45.83	30S ribosomal protein S17 n=1 Tax=Gammaproteobacte...	[more]
UPI00195E68FA	5.320e-9	41.67	30S ribosomal protein S17 n=3 Tax=Gracilibacillus ...	[more]
A0A4D6WZL6_9FLOR	6.050e-9	41.77	30S ribosomal protein S17, chloroplastic n=1 Tax=P...	[more]
A0A651GBH4_9BACT	7.270e-9	48.57	30S ribosomal protein S17 n=3 Tax=Balneolaceae Tax...	[more]
A0A1G0F8I5_9GAMM	9.680e-9	39.29	30S ribosomal protein S17 n=1 Tax=Gammaproteobacte...	[more]

ZOOM

x 1

POSITION

0

Pages