mRNA_E-siliculosus-1a_F_contig1019.178.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1019.178.1 vs. uniprot
Match: D8LIK1_ECTSI (Prostaglandin E synthase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIK1_ECTSI) HSP 1 Score: 537 bits (1384), Expect = 1.710e-184 Identity = 267/270 (98.89%), Postives = 268/270 (99.26%), Query Frame = 3 Query: 312 MAAGAIPSCSAMTASTEAATAGADGNSRHLEGEDITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKVSNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALGEVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWYQSMVSTLDYAPSA 1121
MAAGAIPSCSAMTAST AATAGADGNSRHLEGEDITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDK+SNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDAL EVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWYQSMVSTLDYAPSA
Sbjct: 1 MAAGAIPSCSAMTASTAAATAGADGNSRHLEGEDITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKISNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALREVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWYQSMVSTLDYAPSA 270
BLAST of mRNA_E-siliculosus-1a_F_contig1019.178.1 vs. uniprot
Match: A0A835YKS9_9STRA (Prostaglandin E synthase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKS9_9STRA) HSP 1 Score: 307 bits (787), Expect = 4.830e-95 Identity = 151/237 (63.71%), Postives = 176/237 (74.26%), Query Frame = 3 Query: 411 DITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKVSNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALGEVDGP-FFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQ-GVGAWYQSMVSTLDYAP 1115
DI VYQYKICPFCNKLK VMDFLGIPY VTEVNPLTKKEIKFS+DY+KVPIVR+ + DSP II L+ L+ +S ++ F S DA WAEWADKQLAVLLFPN+TR+F ESYQAFSYV V TFS +DK +NQ +GS AMW AQGKIKKKYNI+DEREAL+ A++ WT E+ G F GG PNLGDLCVFGC+RAIEGLD H + + + + WY M+ L Y P
Sbjct: 44 DIMVYQYKICPFCNKLKAVMDFLGIPYKVTEVNPLTKKEIKFSKDYQKVPIVRLDEQYLHDSPAIIQALLDGLKARGAVSKDQLDAFASPDAMNWAEWADKQLAVLLFPNITRSFGESYQAFSYVQGVSTFSALDKAANQALGSFAMWMAQGKIKKKYNIEDEREALYGALRQWTT---EIQGKKFSGGAVPNLGDLCVFGCLRAIEGLDAHTEAMQEEKALAEWYARMLGVLQYGP 277
BLAST of mRNA_E-siliculosus-1a_F_contig1019.178.1 vs. uniprot
Match: W7TEG9_9STRA (Prostaglandin E synthase 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEG9_9STRA) HSP 1 Score: 290 bits (741), Expect = 1.290e-86 Identity = 142/244 (58.20%), Postives = 177/244 (72.54%), Query Frame = 3 Query: 399 LEGEDITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKVSNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALGEVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWYQSMVSTLDYAPSA*KC 1130
LEG IT+YQYKICPFC K+K V+DF +PY +VNPLTK EIKFS DYRKVPI R+G E+ +DSPVI+ + L +V + VF S DA +WAEWADK+LAVLLFPN+TR+F ES+QAFSYVN+V FS +DK+SNQ +G+ AMWAAQGKIKKKYNI DER ALF A++ WT +GE PF GG +PN+GDL V+ CI AIEGLD KD++A + WY + +++A A C
Sbjct: 157 LEGLRITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTREVGEK--PFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWY----TRVEHAIGASSC 394
BLAST of mRNA_E-siliculosus-1a_F_contig1019.178.1 vs. uniprot
Match: A0A7S1XY88_9STRA (Prostaglandin E synthase 2 (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XY88_9STRA) HSP 1 Score: 266 bits (681), Expect = 3.900e-80 Identity = 129/223 (57.85%), Postives = 164/223 (73.54%), Query Frame = 3 Query: 411 DITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKVSNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALGEVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAW 1079
DI +YQYKICPFCNK+K ++D+ G+ Y V EVNPLTK + K DY+KVP+ +GGE+ DSP I+ L A++ E D + A F S A++W E+ADK+LAVLLFPN+TRN++ESYQAFSYVNDV TFS MDK+SN IGS AMW AQGK+KKKY I+DER+ALFSA+ + +ALG D F GG PN+GD+ VFG IRAIEG+D D+ + +G W
Sbjct: 18 DIVIYQYKICPFCNKIKALLDYYGVDYHVIEVNPLTKAQTKAVTDYKKVPVANIGGEIVTDSPQIVRVLKAKMAEA---DDVDFAGFFSEAAEEWTEFADKKLAVLLFPNITRNWNESYQAFSYVNDVPTFSSMDKMSNLAIGSTAMWLAQGKLKKKYGIEDERDALFSAVTKFEEALG--DNAFLGGANPNMGDIAVFGVIRAIEGMDAFNDLQSETKIGPW 235
BLAST of mRNA_E-siliculosus-1a_F_contig1019.178.1 vs. uniprot
Match: A0A7S0MFA7_9CRYP (Prostaglandin E synthase 2 n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MFA7_9CRYP) HSP 1 Score: 261 bits (667), Expect = 4.300e-77 Identity = 131/249 (52.61%), Postives = 169/249 (67.87%), Query Frame = 3 Query: 387 NSRHLEGEDITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSED---------YRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAV-FCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKVSNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALGEVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWYQSMVSTL 1103
+S L+ + +YQY+ICPFCNK+K V+DF +PY EVNPLTK E+ F++D YRKVP+VR+GG++ DSPV++D L+ L + V+ + A + +W WADK+LAVLLFPNLTR SESYQAF YV+ V FS +DKVSN++ GS AMW AQGKIKKKY I DER AL +++ WTDA+G+ D F GG PNL DLCVFG +R+IEGL+TH VL VG WY+ M +
Sbjct: 49 SSPPLQSLKLEMYQYEICPFCNKIKAVLDFHKVPYKTIEVNPLTKSELSFTKDLPEDHPAHKYRKVPLVRIGGDVVADSPVVLDRLVEGLGKEGVIGAAQMARDYKDPKVAEWVRWADKELAVLLFPNLTRTLSESYQAFGYVDSVPHFSFLDKVSNRMAGSLAMWLAQGKIKKKYGITDERAALRASLDRWTDAIGKSD--FLGGASPNLADLCVFGTLRSIEGLETHAIVLRETQVGPWYERMAGRV 295
BLAST of mRNA_E-siliculosus-1a_F_contig1019.178.1 vs. uniprot
Match: A0A0M0JG54_9EUKA (Prostaglandin E synthase 2 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JG54_9EUKA) HSP 1 Score: 249 bits (635), Expect = 9.170e-73 Identity = 126/243 (51.85%), Postives = 164/243 (67.49%), Query Frame = 3 Query: 357 TEAATAGADGNSRHLEGEDITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIK-FSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKVSNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALGEVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWY 1082
T AA AG G+ + +YQY+ICPFCNK+K ++D +PY TEVNPLTK EIK +S YRKVPI ++G E DS VI L+ R+ V+ ++ A F S A +WA+W+D++ AVLLFPN+TR+FSESYQAF YV V FSM+DKVSNQ+IGS MW AQGKIKKKY IDDER A+ + I W + G PF GG +PN D+CVFGC++AI+ D +K+++A + WY
Sbjct: 34 TTAAAAGTVGS--------VLIYQYEICPFCNKVKALLDLYRVPYETTEVNPLTKGEIKAWSGGYRKVPIAKLGDEQVNDSGVISQALLDRMGTAGVLDAKQLAEFRSPKALEWAKWSDEKFAVLLFPNITRSFSESYQAFGYVMSVPHFSMLDKVSNQIIGSFFMWMAQGKIKKKYGIDDERAAVVAGINHWLNE-GVGSKPFAGGKQPNFADVCVFGCLKAIDRTDAYKEIMAETAIKPWY 267
BLAST of mRNA_E-siliculosus-1a_F_contig1019.178.1 vs. uniprot
Match: A0A7S0IJQ6_9EUKA (Prostaglandin E synthase 2 n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IJQ6_9EUKA) HSP 1 Score: 248 bits (633), Expect = 2.450e-72 Identity = 121/237 (51.05%), Postives = 165/237 (69.62%), Query Frame = 3 Query: 414 ITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSEDYRKVPIVRMGG------ELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKVSNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWT-DALGEVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWYQSMVSTL 1103
+ ++QY ICPFCNK+K ++D IPY +VNPLTKKEIKFS++YRKVPI +GG DSP+I D L+ R+ +K + +E A F S+ + +WAEW+DK+LAVLLFP +TR F+ES+QAF YV V FSM+DK+SNQV+G+ AMW AQGKIKKKY IDDE A+ AI W + +GE F GG +P+LGD+ V+GC++AI+ T +++A GV WY+ M + +
Sbjct: 50 VRLFQYDICPFCNKIKAMLDLHKIPYETVDVNPLTKKEIKFSKEYRKVPIAMLGGLEGSGAVQVNDSPLIADTLLERMELSKAVRSDELAHFRSATSLEWAEWSDKKLAVLLFPRMTRTFAESFQAFGYVMQVPHFSMVDKLSNQVVGAFAMWMAQGKIKKKYAIDDEAAAVREAIAHWLKEGVGEAS--FAGGQKPHLGDVAVYGCLKAIDRTSTFSEIMAETGVKPWYERMTAEV 284
BLAST of mRNA_E-siliculosus-1a_F_contig1019.178.1 vs. uniprot
Match: A0A7S0HU74_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HU74_9CRYP) HSP 1 Score: 236 bits (603), Expect = 4.790e-68 Identity = 121/239 (50.63%), Postives = 158/239 (66.11%), Query Frame = 3 Query: 414 ITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSED---------YRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSS----DAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKVSNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALGEVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWYQSM 1091
I +YQY+ICPFCNK+K V+D+ Y+ EVNPL+KKEI F+ + YRKVPI +G +L DS +I++ ++ +L E K +E+ + CSS ++W WAD++LAVLLFPNLTR FSES+QAFSYV V TFS++DK+SN V G+ AMW AQGK+K KY I DER+AL A+ W DAL PF GG PNL DLCVFG +RA++G T + V+ V WY M
Sbjct: 43 IKIYQYEICPFCNKVKAVLDYCKFSYTTVEVNPLSKKEINFTRELPSDHACSNYRKVPIALVGEDLIADSSLILNAIVEKLSEEK---EEKIKLLCSSAKDPQVQEWVRWADQELAVLLFPNLTRTFSESFQAFSYVQQVPTFSLLDKLSNHVAGATAMWLAQGKLKSKYKISDERQALALALAKWADALDRK--PFLGGSSPNLADLCVFGVLRAVDGSAT-QTVIEESPVSDWYGRM 275
BLAST of mRNA_E-siliculosus-1a_F_contig1019.178.1 vs. uniprot
Match: A0A7S2C557_9EUKA (Prostaglandin E synthase 2 n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2C557_9EUKA) HSP 1 Score: 235 bits (599), Expect = 3.040e-67 Identity = 116/233 (49.79%), Postives = 157/233 (67.38%), Query Frame = 3 Query: 414 ITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIK-FSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKVSNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDW-TDALGEVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWYQSMVSTLD 1106
+ VYQY+ICPFC K+K ++D +PY+ TEVNPLTK EIK +S Y+KVPI + GE DSPVI +++ RL + + + F S A +WA+W+D++LAVL FPN+TR F E+Y+AF YV V FS +DK +NQ IGS MW AQGKIKKKY IDDEREA S + W ++A+G PF GG+RPNL D+ VFG ++AI+ H D++A V WY+ M+ ++
Sbjct: 70 VQVYQYEICPFCCKVKALLDIHRVPYATTEVNPLTKSEIKAWSGGYKKVPIALIAGEQVNDSPVICTQILDRLAASGQIDKKLLDEFRSPSALEWAKWSDEKLAVLAFPNITRTFGEAYEAFGYVWGVPHFSQLDKAANQAIGSFFMWMAQGKIKKKYGIDDEREAFVSGVNKWMSEAVGTT--PFAGGERPNLADVAVFGLLKAIDRTAAHSDIMAATSVAPWYERMLEAVE 300
BLAST of mRNA_E-siliculosus-1a_F_contig1019.178.1 vs. uniprot
Match: A0A7S3Y9Y7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9Y7_HETAK) HSP 1 Score: 232 bits (591), Expect = 8.130e-67 Identity = 117/224 (52.23%), Postives = 155/224 (69.20%), Query Frame = 3 Query: 411 DITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFC------------SSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKVSNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALGEVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHK 1046
DI +YQYKICPFC+K+K V+DF IPYS EVNPLTK EI FS+DYRKVPI + G + KDS IID ++++++ EE A F ++ A A WAD++LAVLLFPN+TR+F+E+ QAF+Y+ DV TFS K++N V+GS AMW AQGK+KKKY I+DER+AL+S + + +ALG PF GG P +GDL +G +RA+EGLD H+
Sbjct: 38 DIKLYQYKICPFCSKVKTVLDFFDIPYSTIEVNPLTKAEISFSKDYRKVPIADVDGVVIKDSTEIIDHILSKIQFDDA---EERARFLPPPXXXXPAGAVAAPAAGTAAWADRKLAVLLFPNITRSFAEARQAFAYIQDVPTFSTPQKIANVVLGSTAMWLAQGKLKKKYGIEDERQALYSEVANLLEALG--GRPFLGGAAPGVGDLAAYGVLRAVEGLDAHR 256 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1019.178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1019.178.1 >prot_E-siliculosus-1a_F_contig1019.178.1 ID=prot_E-siliculosus-1a_F_contig1019.178.1|Name=mRNA_E-siliculosus-1a_F_contig1019.178.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=271bp MAAGAIPSCSAMTASTEAATAGADGNSRHLEGEDITVYQYKICPFCNKLKback to top mRNA from alignment at E-siliculosus-1a_F_contig1019:11487..16162+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1019.178.1 ID=mRNA_E-siliculosus-1a_F_contig1019.178.1|Name=mRNA_E-siliculosus-1a_F_contig1019.178.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4676bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1019:11487..16162+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1019:11487..16162+ >mRNA_E-siliculosus-1a_F_contig1019.178.1 ID=mRNA_E-siliculosus-1a_F_contig1019.178.1|Name=mRNA_E-siliculosus-1a_F_contig1019.178.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1626bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1019:11487..16162+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |