prot_E-siliculosus-1a_F_contig12871.1755.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12871.1755.1
Unique Nameprot_E-siliculosus-1a_F_contig12871.1755.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length45
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12871.1755.1 vs. uniprot
Match: D7FRZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ1_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 2.170e-15
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0 
Query:    4 ASRCYGRGRPGRALRKPGGCCGFWSSEVAVAAANEDVLHSR 44
            ASRCYGRGR GRALR+PGGC GFWSSEVA  AANE+VLHSR
Sbjct:  323 ASRCYGRGRLGRALRRPGGCRGFWSSEVAATAANENVLHSR 363
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12871.1755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRZ1_ECTSI2.170e-1585.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12871contigE-siliculosus-1a_F_contig12871:503..637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12871.1755.1mRNA_E-siliculosus-1a_F_contig12871.1755.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12871 503..637 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12871.1755.1 ID=prot_E-siliculosus-1a_F_contig12871.1755.1|Name=mRNA_E-siliculosus-1a_F_contig12871.1755.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=45bp
GQKASRCYGRGRPGRALRKPGGCCGFWSSEVAVAAANEDVLHSR*
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