Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10178.170.1 vs. uniprot
Match:
D7FRH8_ECTSI (Signal peptide peptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH8_ECTSI)
HSP 1 Score: 216 bits (550), Expect = 8.440e-64
Identity = 107/110 (97.27%), Postives = 108/110 (98.18%), Query Frame = 1
Query: 1 RFSYRSWGGGYLACVREVRDAVTRFREVGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLNGSGGQKLFFRGFLDKYGIKPEV 330
RFSYRSWGGGYLACV+EVRDAVTRFRE GSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGL GSGGQKLFFRGFLDKYGIKPEV
Sbjct: 25 RFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEV 134
BLAST of mRNA_E-siliculosus-1a_F_contig10178.170.1 vs. uniprot
Match:
A0A372JBQ3_9ACTN (Signal peptide peptidase SppA n=3 Tax=Actinomadura TaxID=1988 RepID=A0A372JBQ3_9ACTN)
HSP 1 Score: 74.7 bits (182), Expect = 2.400e-12
Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 22 GGGYLACVREVRDAVTRFREVGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLNGSGGQKLFFRGFLDKYGIKPEVVR 336
GG LA V+EVR+AV R G ++T+A A+TFGEGG Y+LASAF++V +Q TG VGL G ++ FF G L+K G++P +
Sbjct: 77 GGAGLALVQEVREAVGALRAAG-------------------KYTVAWAETFGEGGRGTVPYYLASAFDRVFLQPTGEVGLTGVALEEPFFAGALEKAGVQPRFAK 162
BLAST of mRNA_E-siliculosus-1a_F_contig10178.170.1 vs. uniprot
Match:
A0A7S0YTA2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YTA2_9CRYP)
HSP 1 Score: 70.1 bits (170), Expect = 8.570e-11
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query: 34 LACVREVRDAVTRFREVGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLNGSGGQKLFFRGFLDKYGIKPEVV 333
+A ++E+RDAV FR SA GE + +R + ADTFGE G G+Y+LA+AF+K+ +Q +G VG+ G + F + L K G+ P+ +
Sbjct: 93 MATMQEIRDAVMAFR------SAQGGE-------EARRPAVYAADTFGESGQGTGQYYLATAFDKIFIQPSGLVGIIGLHSEAFFLKRMLAKLGVHPQFI 179
BLAST of mRNA_E-siliculosus-1a_F_contig10178.170.1 vs. uniprot
Match:
A0A5Q4DG26_9BACT (Signal peptide peptidase SppA n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A5Q4DG26_9BACT)
HSP 1 Score: 65.5 bits (158), Expect = 3.800e-9
Identity = 41/108 (37.96%), Postives = 57/108 (52.78%), Query Frame = 1
Query: 22 GGGYLACVREVRDAVTRFREVGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLNGSGGQKLFFRGFLDKYGIKPEVVRSRG 345
G G A +E+ AVTRFR G T+ A+TFGE PA G YFLA+AF+++++Q +G VGL G + FFRG +++ I P+ SRG
Sbjct: 97 GVGGWATTQEIHGAVTRFRASGKP-------------------TLLFAETFGELAPAQGAYFLATAFDEIVLQPSGEVGLAGLALEAPFFRGVFERWDIVPQF-ESRG 184
BLAST of mRNA_E-siliculosus-1a_F_contig10178.170.1 vs. uniprot
Match:
A0A545TXP2_9PROT (Protease 4 n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TXP2_9PROT)
HSP 1 Score: 64.3 bits (155), Expect = 9.400e-9
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 34 LACVREVRDAVTRFREVGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLNGSGGQKLFFRGFLDKYGIKP 324
++ V+E+R+A+ FR G +F+IA A++FGEGG Y+LASAFE++ +Q +G + + G + + RG LDK+G+KP
Sbjct: 111 ISQVQELREAIAGFRATG-------------------KFSIAFAESFGEGGDGTLHYYLASAFEEIWLQPSGDLDITGIQLESPYIRGLLDKHGVKP 188
BLAST of mRNA_E-siliculosus-1a_F_contig10178.170.1 vs. uniprot
Match:
A0A2E2QB37_9PROT (Protease 4 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E2QB37_9PROT)
HSP 1 Score: 63.9 bits (154), Expect = 1.290e-8
Identity = 36/105 (34.29%), Postives = 56/105 (53.33%), Query Frame = 1
Query: 25 GGY-LACVREVRDAVTRFREVGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLNGSGGQKLFFRGFLDKYGIKPEVVR 336
G Y LA + +++ A+ +FR G ++T A AD+FGE G + EYFLA++F++V +Q G + LNG L+F+G DKY + PE +
Sbjct: 126 GNYSLAQLYDLKAAIKKFRGAG-------------------KYTYAYADSFGEAGYGMDEYFLAASFDEVWMQPLGSLSLNGFALSNLYFKGLFDKYKVMPEFFQ 211
BLAST of mRNA_E-siliculosus-1a_F_contig10178.170.1 vs. uniprot
Match:
A0A7K0BPV9_9ACTN (Protease 4 n=1 Tax=Actinomadura macrotermitis TaxID=2585200 RepID=A0A7K0BPV9_9ACTN)
HSP 1 Score: 63.2 bits (152), Expect = 2.320e-8
Identity = 36/105 (34.29%), Postives = 55/105 (52.38%), Query Frame = 1
Query: 22 GGGYLACVREVRDAVTRFREVGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLNGSGGQKLFFRGFLDKYGIKPEVVR 336
GG LA +E+R AV R+ G ++T+A A+TFGEGG Y+LA+ F+K+ +Q +G VGL G ++ F G L+K G++P +
Sbjct: 77 GGVGLAMTQELRAAVQAVRDAG-------------------KYTVAWAETFGEGGRGSVPYYLATGFDKIWLQPSGEVGLTGVALEEPFLAGALEKAGVQPRFAK 162
BLAST of mRNA_E-siliculosus-1a_F_contig10178.170.1 vs. uniprot
Match:
UPI000408AB31 (signal peptide peptidase SppA n=1 Tax=Geminicoccus roseus TaxID=404900 RepID=UPI000408AB31)
HSP 1 Score: 62.0 bits (149), Expect = 5.790e-8
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = 1
Query: 34 LACVREVRDAVTRFREVGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLNGSGGQKLFFRGFLDKYGIKPEVVRSR 342
A +E+R A+ R G + T+A AD+FGE P Y+LASAFE++++Q G VGL G ++ F RG +DK G++ EV + R
Sbjct: 102 FATTQELRQAILAVRAAG-------------------KTTLAFADSFGELSPGNEGYYLASAFEQIVLQPVGSVGLTGLAMEEPFARGLIDKLGVELEVTKRR 185
BLAST of mRNA_E-siliculosus-1a_F_contig10178.170.1 vs. uniprot
Match:
A0A7V9AHG6_9BACT (Signal peptide peptidase SppA n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7V9AHG6_9BACT)
HSP 1 Score: 62.0 bits (149), Expect = 5.800e-8
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = 1
Query: 22 GGGYLACVREVRDAVTRFREVGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLNGSGGQKLFFRGFLDKYGIKPEV 330
GG L + E+RDAVT FR G A I ++TFG+GGP G Y+LA+AF+ + +Q +G + + G + F G LD+ GI+P +
Sbjct: 85 GGLGLGQIEEIRDAVTAFRASGKPA-------------------ILFSETFGDGGPGHGGYYLATAFDSIFLQPSGDLSVAGLRIEVPFVAGTLDRVGIEPRI 168
BLAST of mRNA_E-siliculosus-1a_F_contig10178.170.1 vs. uniprot
Match:
A0A368T4M0_9ACTN (Signal peptide peptidase SppA n=1 Tax=Marinitenerispora sediminis TaxID=1931232 RepID=A0A368T4M0_9ACTN)
HSP 1 Score: 62.0 bits (149), Expect = 5.800e-8
Identity = 37/96 (38.54%), Postives = 52/96 (54.17%), Query Frame = 1
Query: 43 VREVRDAVTRFREVGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLNGSGGQKLFFRGFLDKYGIKPEV 330
V+E+R AVT FR G T+A +++FGE GP Y+LA+AFE++++Q +G VGL G FFR +DK GI+ EV
Sbjct: 85 VQELRAAVTAFRRSGKP-------------------TVAWSESFGEFGPGTVPYYLAAAFEEIVLQPSGSVGLTGLSVTNRFFRDAVDKLGIEYEV 161
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10178.170.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 8.44e-64 / Id = 97.27 Expect = 2.40e-12 / Id = 40.00 Expect = 8.57e-11 / Id = 37.00 Expect = 3.80e-9 / Id = 37.96 Expect = 9.40e-9 / Id = 35.05 Expect = 1.29e-8 / Id = 34.29 Expect = 2.32e-8 / Id = 34.29 Expect = 5.79e-8 / Id = 34.95 Expect = 5.80e-8 / Id = 34.95 Expect = 5.80e-8 / Id = 38.54 Sequence D7FRH8_ECTSI A0A372JBQ3_9ACTN A0A7S0YTA2_9CRYP A0A5Q4DG26_9BACT A0A545TXP2_9PROT A0A2E2QB37_9PROT A0A7K0BPV9_9ACTN UPI000408AB31 A0A7V9AHG6_9BACT A0A368T4M0_9ACTN Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10178.170.1
>prot_E-siliculosus-1a_F_contig10178.170.1 ID=prot_E-siliculosus-1a_F_contig10178.170.1|Name=mRNA_E-siliculosus-1a_F_contig10178.170.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=129bp
RFSYRSWGGGYLACVREVRDAVTRFREVGSDASATAGEGAEADGRQRKRF back to top mRNA from alignment at E-siliculosus-1a_F_contig10178:642..2453-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10178.170.1 ID=mRNA_E-siliculosus-1a_F_contig10178.170.1|Name=mRNA_E-siliculosus-1a_F_contig10178.170.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1812bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10178:642..2453- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)AGGTTCAGCTACCGCAGCTGGGGAGGGGGGTACTTGGCTTGCGTTCGAGA
GGTCCGCGATGCCGTCACTCGCTTCCGCGAGGTCGGCAGCGATGCTTCTG
CCACCGCTGGTGAAGGAGCAGAGGCGGACGGGCGGCAGCGAAAGAGGTTT
ACTATCGCGGTAGCAGATACGTTCGGGGAAGGTGGTCCA GTGAGATGGCT
GGGTAGGACTGGTTTGTCGGTTCGACGCGTCGCAGTTGTCAGGAGGATGA
TGCTGTGATCACGATCTCGAGACACATTGTGCTCGATTGCCATGCGTCTA
GCTCCTACGTTCGTCGGGTTGTTAGTGAAGTGTTTGAATTTTCAGGTGGA
AACAGGGACTATTGCCCCTGCGTGAGACAAGTTGCTGCTAGATTCCGAGG
TCGAATTCAGTTGACTCGTACGCGGGGTCTCCTGCTTTACTATGGCCGCC
CAGGTTCTGACTCGACCGGAATTATCATGTTCGGGGTTTCCTTTCCCAAC
AGGCCGTTGGCGAGTACTTCTTGGCCTCCGCATTCGAGAAGGTCCTGGTG
CAAAAGACTGGCTACGTGGGTCTTAACGGGAGCGGTGGCCAAAAGCTGTT
TTTCAGGGGCTTCTTGGACAAGTACGGCATTAAGCCCGAGGTCGTTCGCT
CGCGAG GTGGGTACGAAAACTTTACATTGCACGTGTGGCATATGTCGCCT
TGCGATACGACTTGTCCTCTAAAAACCCAAGATATAATTGTTTAATATGG
TACATAAAAACCCGTAGGTTAGATTTGTGTCTTCTTCGACCGCCCCAAGA
TAGCGAAAAGTGTCCAGGATTGTCTCGTTGTACAATGGCCACTAGATAGG
GACAAGGTTGACTTTGAAGTCGATTTCGGATCAGTTTCTCAAGAGGTGGG
CATGCTGCATGAAACTATCGTGGCAAGGTCGGGCGTTTACTTACATCTAA
ATCAATTCGTGCTGAATTCAGAAGGGCAATTGTGTCGGGTTTGAAGGGGC
ATTCGATGGTTGACGCTCGACCACCTCCTGAAGCGTTGATGCACATTCCA
CACAGGAGTACAAGAGCGCCGCGGAGAGTCTGGTCCGGAAGGCGTATAG C
CCGCACGAGAGAGAAGCGATGACGTCCCTTCTCACGTCCATGCTCGACGA
CGTTGCAGACGGTGTCGCGGCTTCCCG GTGAGGCCTGGGGTTAGACTTCT
GCAGCAGCCGCTGCTGCATCTTTGCTGTTGGACGCTACTCCTCTGACGAG
GGGCTAACCCTAACCTAACCCTAACGTTCCTAGGGATACATACGTGAGAA
GTAACCGGTGGTCACAAAACGTGCACTTTGTTTTTCTTGACGAGAATATT
GCACCTCTGATCTAGGTACATAGTCTAGTCCCTTTCCTTCTGAAGGGGGA
ATAATAGTGATGACCACCTCCGTTTGCTTCCGAGTGCTACCAACCACTGT
GGATGTCGGTATCAACATTGCGGTGACGAGTTCTCAGCAGCAGCAGTAGA
ATATATAGGGCAGATGCTGACGTCTGACGTTGTACATCTGGATCATGGCA
CTGTATGGCTTGGTCGAGATCGGGGAGGTGGACAGATGGGGTTGCATGAG
AGAGTTAACGATACTATTAATATTGCTCTGCACAGCACGTGAACTGCTCT
CGAAGTGCAAGGTTGTTTGCGTTTCGTTCAGTTTTTTTCCCTGCTGTATG
CATATCACCGTCCTGAACCAGGGGTTTCAAGGACCGGAAGGATGTGTACG
CCATCATGCACGACTGTCCCCTCCCGGCGACGCTTGCCCTGTCGGCTAAC
CTCATCGACGGT back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10178:642..2453-
>mRNA_E-siliculosus-1a_F_contig10178.170.1 ID=mRNA_E-siliculosus-1a_F_contig10178.170.1|Name=mRNA_E-siliculosus-1a_F_contig10178.170.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=774bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10178:642..2453- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top