mRNA_E-siliculosus-1a_F_contig1017.166.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Properties


Property Name	Value
Start	1
Stop	1
Cds size	348
Model size	629
Exons	1
Ec32 ortholog	Ec-04_004220.1
Ec32 ortholog description	Hypothetical protein
Hectar predicted targeting category	other localisation

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1017:1524..2152-
coding sequence from alignment at E-siliculosus-1a_F_contig1017:1524..2152-

protein sequence of mRNA_E-siliculosus-1a_F_contig1017.166.1

>prot_E-siliculosus-1a_F_contig1017.166.1 ID=prot_E-siliculosus-1a_F_contig1017.166.1|Name=mRNA_E-siliculosus-1a_F_contig1017.166.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=116bp
MIQTRTHCGGPASINTTLPYRHDTPKDPKNAKISYNTRPTHRRPTHRITT
QQQHLAHPHIPRKAETAPAPPLSPSRQKPHTPPPTTETRALHAQAEHTGS
RAFYVPSPRTTCVCV*

mRNA from alignment at E-siliculosus-1a_F_contig1017:1524..2152-

Legend: UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1017.166.1 ID=mRNA_E-siliculosus-1a_F_contig1017.166.1|Name=mRNA_E-siliculosus-1a_F_contig1017.166.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=629bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1017:1524..2152- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCAAAATCCATCCTGGGTGTGTCATGGCTAGGCCCTCCCTCGGCAAG
ACTAGCAAAATTTTATCGCGAAAGGGGAAATTGGCTAGGCGGGTGCCTAA
AAAAAAAACGCTTGCCCAAAACTTCTGCACGGAAACAAAAGGAGAAAACA
GCGGCGTAATCGATTTGGTACGAAAATAGAGATTCTACAGGAAAAAAAAA
AAAAAAACGACCAAGAAGGACTACAGCACGCAACCCCTTACCGCACGGCA
GGACGCAAAAAGTCACGAAAATCAGACACATATGATACAAACACGCACAC
ATTGCGGCGGCCCCGCCTCTATCAACACGACGCTACCGTACCGACACGAC
ACACCCAAAGACCCAAAAAACGCCAAGATATCGTACAATACGCGCCCCAC
ACACAGGCGACCGACACACCGTATCACCACCCAACAACAACACTTGGCAC
ACCCTCATATCCCGCGGAAGGCGGAGACAGCGCCTGCTCCCCCCCTCTCC
CCTTCTCGACAAAAACCGCACACCCCGCCTCCAACCACCGAAACCCGCGC
GCTACATGCACAAGCGGAACACACCGGCTCGAGGGCGTTTTACGTACCTT
CCCCGCGCACAACGTGTGTGTGTGTGTGA

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1017:1524..2152-

>mRNA_E-siliculosus-1a_F_contig1017.166.1 ID=mRNA_E-siliculosus-1a_F_contig1017.166.1|Name=mRNA_E-siliculosus-1a_F_contig1017.166.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=696bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1017:1524..2152- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATACAAACACGCACACATTGCGGCGGCCCCGCCTCTATCAACACGAC
GCTACCGTACCGACACGACACACCCAAAGACCCAAAAAACGCCAAGATAT
CGTACAATACGCGCCCCACACACAGGCGACCGACACACCGTATCACCACC
CAACAACAACACTTGGCACACCCTCATATCCCGCGGAAGGCGGAGACAGC
GCCTGCTCCCCCCCTCTCCCCTTCTCGACAAAAACCGCACACCCCGCCTC
CAACCACCGAAACCCGCGCGCTACATGCACAAGCGGAACACACCGGCTCG
AGGGCGTTTTACGTACCTTCCCCGCGCACAACGTGTGTGTGTGTGTGAAT
GATACAAACACGCACACATTGCGGCGGCCCCGCCTCTATCAACACGACGC
TACCGTACCGACACGACACACCCAAAGACCCAAAAAACGCCAAGATATCG
TACAATACGCGCCCCACACACAGGCGACCGACACACCGTATCACCACCCA
ACAACAACACTTGGCACACCCTCATATCCCGCGGAAGGCGGAGACAGCGC
CTGCTCCCCCCCTCTCCCCTTCTCGACAAAAACCGCACACCCCGCCTCCA
ACCACCGAAACCCGCGCGCTACATGCACAAGCGGAACACACCGGCTCGAG
GGCGTTTTACGTACCTTCCCCGCGCACAACGTGTGTGTGTGTGTGA

mRNA_E-siliculosus-1a_F_contig1017.166.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

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