prot_E-siliculosus-1a_F_contig10158.161.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10158.161.1
Unique Nameprot_E-siliculosus-1a_F_contig10158.161.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length157
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A6H5JXQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ5_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 4.390e-79
Identity = 144/156 (92.31%), Postives = 144/156 (92.31%), Query Frame = 0
Query:    2 NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXXXGGPAVKEEAGESGTGGAAXXXXXXXXXXAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 157
            NQAELTEEEDSSLFFVQLPTKLPRPLAA QRGKDGASAPVRGKGK     GGPAVKEEAGESG G   XXXXXXXX  AAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV
Sbjct:  245 NQAELTEEEDSSLFFVQLPTKLPRPLAAFQRGKDGASAPVRGKGKGKAT-GGPAVKEEAGESGAGXXXXXXXXXXXKGAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 399          
BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: D8LHB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB7_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 1.520e-76
Identity = 147/157 (93.63%), Postives = 148/157 (94.27%), Query Frame = 0
Query:    2 NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXXX-GGPAVKEEAGESGTGGAAXXXXXXXXXXAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 157
            NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXX  GGPAVKEEAGESG G   XXXXXXXXXX  AEKASEI ADDVAFD+GLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV
Sbjct:  308 NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXXATGGPAVKEEAGESGAGXXXXXXXXXXXXXXXAEKASEIAADDVAFDRGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 464          
BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A835ZEC9_9STRA (RNA polymerase III RPC4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC9_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.430e-12
Identity = 55/154 (35.71%), Postives = 71/154 (46.10%), Query Frame = 0
Query:    4 AELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXXXGGPAVKEEAGESGTGGAAXXXXXXXXXXAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 157
            A L  EED  +FFVQLPT LPR         +  S P  G G       G          GT              AAA+ + E       +D  L  M PG+IGKL + +SG  +L++ GV+L V  G+P  FVE+   ++ KQKT   FGQV
Sbjct:  290 AALQAEEDEGIFFVQLPTALPRVFPESM---EHPSQPTDGGGD------GXXXXXHGAVGGT--------RAQGAKAAADTSGEADGSP-GYDNSLTTMLPGRIGKLQIRRSGTVQLLLAGVALDVSAGMPCHFVEELTCVNPKQKTMSMFGQV 425          
BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A7S3UWU6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWU6_HETAK)

HSP 1 Score: 67.0 bits (162), Expect = 1.470e-11
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   91 DDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 157
            +D   D GLRR+ PG++G++ VH SG+ +L +G     V PGLP  FV+  V++DA+  T C FGQ+
Sbjct:    5 EDPVADGGLRRVAPGRVGRVRVHASGRVKLTLGDTVFDVAPGLPCHFVQDVVAVDAEGGTACFFGQL 71          
BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A6G0WW31_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW31_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.680e-7
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   85 ASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 157
            A+E   DD+ FD+ L  M  G +GK+ +H+SGKA LV+G  +  + PG P +F E+ VSID K++     G V
Sbjct:  244 ATERSQDDL-FDKSLHAMPGGFMGKINIHKSGKAVLVLGDKTFNIAPGHPPTFYEEAVSIDTKEELLSMLGPV 315          
BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: W4GQG3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GQG3_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.750e-7
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0
Query:   82 AEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 157
            A K+SE    +  FD+ L  M  G +GK+ +H+SGKA LV+G  +  + PG P SF E+ VSID K K     G V
Sbjct:  252 ASKSSEN-GTETRFDKSLSAMPGGYLGKINIHKSGKAVLVLGDKTFDLAPGQPPSFYEEVVSIDVKDKLLSMLGPV 326          
BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A6A5AC38_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AC38_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 9.590e-7
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 0
Query:   92 DVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 157
            +  FD+ L  M  G +GK+ +H+SGKA LV+G  +  + PG P SF E+ VSID K K     G V
Sbjct:  266 ETRFDKSLSAMPGGYLGKINIHKSGKAVLVLGDKTFDLAPGQPPSFYEEVVSIDVKDKLLSMLGPV 331          
BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A7S3VAP1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAP1_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.760e-6
Identity = 29/84 (34.52%), Postives = 44/84 (52.38%), Query Frame = 0
Query:   81 AAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGG-------VSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 157
            AA   S        +D  L+    GK GK+ +H+SGKA LV+GG       V +++  GLP  F++Q V+ID    ++   G+V
Sbjct:  420 AAAPTSSTNTSGAGYDDTLKDSAAGKYGKIVIHKSGKAYLVVGGADSKTPQVKMMLTEGLPCGFLQQAVAIDPNNASYVPLGEV 503          
BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: A0A024TER0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TER0_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 6.040e-6
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 0
Query:   84 KASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQV 157
            KA    ADD+ FD+ L  M  G +GK+ +H+SGKA LV+G  +  +  G P +  E+ VSID K K F   G +
Sbjct:  252 KAPNHGADDL-FDKSLLSMPGGYLGKINIHKSGKAVLVLGDKTFELAAGQPPACYEEVVSIDVKDKLFSMLGPI 324          
BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Match: T1HGK6_RHOPR (Uncharacterized protein n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1HGK6_RHOPR)

HSP 1 Score: 52.0 bits (123), Expect = 8.710e-6
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   99 LRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQ--GVSIDAKQKT 150
            LR + PG+IGKL + +SGKARL++G V L V PG   +F +    V++D  QKT
Sbjct:   26 LRNLPPGRIGKLQILKSGKARLILGDVKLWVEPGTQTAFKQDLISVNLDPNQKT 79          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10158.161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JXQ5_9PHAE4.390e-7992.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHB7_ECTSI1.520e-7693.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZEC9_9STRA1.430e-1235.71RNA polymerase III RPC4-domain-containing protein ... [more]
A0A7S3UWU6_HETAK1.470e-1144.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6G0WW31_9STRA2.680e-742.47Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4GQG3_9STRA3.750e-743.42Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6A5AC38_9STRA9.590e-743.94Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S3VAP1_9STRA3.760e-634.52Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A024TER0_9STRA6.040e-641.89Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
T1HGK6_RHOPR8.710e-648.15Uncharacterized protein n=1 Tax=Rhodnius prolixus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007811DNA-directed RNA polymerase III subunit RPC4PFAMPF05132RNA_pol_Rpc4coord: 12..157
e-value: 1.1E-19
score: 71.3
IPR007811DNA-directed RNA polymerase III subunit RPC4PANTHERPTHR13408DNA-DIRECTED RNA POLYMERASE IIIcoord: 6..157
NoneNo IPR availablePANTHERPTHR13408:SF0DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4coord: 6..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10158contigE-siliculosus-1a_F_contig10158:747..2526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10158.161.1mRNA_E-siliculosus-1a_F_contig10158.161.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10158 747..2526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10158.161.1 ID=prot_E-siliculosus-1a_F_contig10158.161.1|Name=mRNA_E-siliculosus-1a_F_contig10158.161.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=157bp
QNQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKGKGK
AGGPAVKEEAGESGTGGAAAGATSGKGTGAAAEKASEIPADDVAFDQGLR
RMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKT
FCSFGQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007811RPC4