prot_E-siliculosus-1a_F_contig1260.1614.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1260.1614.1
Unique Nameprot_E-siliculosus-1a_F_contig1260.1614.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length321
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1260.1614.1 vs. uniprot
Match: D8LNA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNA4_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 2.310e-66
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 
Query:    1 MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARGANAGDQEIYKASVSKARDRAERRGNKLSSKQQRQAAKSRLGGHLVHTMLDSDDDG 114
            MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARGANAGDQEIYKASVSKARDRAERRGNKLSSKQQRQAAKSRLGGHLVHTMLDSDDDG
Sbjct:    1 MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARGANAGDQEIYKASVSKARDRAERRGNKLSSKQQRQAAKSRLGGHLVHTMLDSDDDG 114
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1260.1614.1 vs. uniprot
Match: A0A6H5K6N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N1_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 3.740e-66
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 
Query:    1 MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARGANAGDQEIYKASVSKARDRAERRGNKLSSKQQRQAAKSRLGGHLVHTMLDSDDDGN 115
            MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARGANAGDQEIYKASVSKARDRAERRGNKLSSKQQRQAAKSRLGGHLVHTMLDSDDDGN
Sbjct:    1 MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARGANAGDQEIYKASVSKARDRAERRGNKLSSKQQRQAAKSRLGGHLVHTMLDSDDDGN 115
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1260.1614.1 vs. uniprot
Match: A0A836CMD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD5_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.660e-22
Identity = 58/113 (51.33%), Postives = 76/113 (67.26%), Query Frame = 0 
Query:    1 MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARGANAGDQEIYKASVSKARDRAERRGNKLSSKQQRQAAKSRLGGHLVHTMLDSDDD 113
            MSQC  CFVGQC+RH LQDHGKR   L +K+       +R+++ ++  Q+DK EA     +  DQ+ YK    K RDRAERRGNKL+ +QQ +A K RLGGHLV+ M+DS D+
Sbjct:    1 MSQCGACFVGQCKRHPLQDHGKRTKDLMAKLPSKSETLKRVYETLLKKQVDKFEAQTNAVS--DQQAYKEKQGKERDRAERRGNKLTREQQEKAKKLRLGGHLVNLMIDSSDE 111
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1260.1614.1 vs. uniprot
Match: W7T9Z9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9Z9_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.620e-10
Identity = 50/120 (41.67%), Postives = 72/120 (60.00%), Query Frame = 0 
Query:    1 MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARG---ANAGDQEIYKASVSKARDRAERRGNKLSSKQQRQA-AKSRLGGHLVHTMLDSDDDGND 116
            MS CP C+VGQC++HKLQDHG RE  L S   +    Q+RL++ +V   +D L+   +    A AG    Y+ +V K R++A+R+ +K S +Q R+A A   L G L+ TML +D D  D
Sbjct:    1 MSSCPQCYVGQCRKHKLQDHGARERALLSSRSE---LQRRLYESLVQPHVDTLKTTKKATAEAEAGHCR-YRDAVGKDREKAQRQKSKFSEEQVRKAQALGGLRGDLLRTMLANDSDFED 116
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1260.1614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNA4_ECTSI2.310e-66100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6N1_9PHAE3.740e-66100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CMD5_9STRA3.660e-2251.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7T9Z9_9STRA2.620e-1041.67Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 199..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1260contigE-siliculosus-1a_F_contig1260:27746..30457 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1260.1614.1mRNA_E-siliculosus-1a_F_contig1260.1614.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1260 27059..30541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1260.1614.1 ID=prot_E-siliculosus-1a_F_contig1260.1614.1|Name=mRNA_E-siliculosus-1a_F_contig1260.1614.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=321bp
MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQL
DKLEAAARGANAGDQEIYKASVSKARDRAERRGNKLSSKQQRQAAKSRLG
GHLVHTMLDSDDDGNDSDSDDGKGRAKGGRKSRDKKRKSRKDKKRKRRGS
GDEEGSSSGSDGSDSEGESRADRKRRRKDKKKERRHRGGGSNGKEKSSSE
KKKDRSDRKERKKERKERRRSEKKSKKRRRQEEGADGEGDGDDARNGDDK
GAPPPPANAAAGKMDVVVTNGGSGGAAAAAAAAVEAAAITMPAREEGAGI
ALPTRCRRRWCFEGWLLECR*
back to top