Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10151.160.1 vs. uniprot
Match:
D7FJ76_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ76_ECTSI)
HSP 1 Score: 366 bits (939), Expect = 6.800e-123
Identity = 242/339 (71.39%), Postives = 252/339 (74.34%), Query Frame = 1
Query: 1 TSQSVSSDFFLMVGSDAAVGLPDESAVVEYDLIVRTVAGVVPPKAQDITGDSVGQDVSGTTLSFTRPLAPANKQAISGTPGDETIFIYAFGEDNELAFHGLAPNRGSLVLDLFCGDG---DGATVAGTPAPTVGGTPAASEASSAAPIDTDTPTAAPTM----------------------------------AVSRTPPSSTLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGTAGMTGSETMAPSAADGDRGVDVPGDTGAPTDASDSLLMTESPSSAGEGLVEEETDGALRVGGGGRWAAAAATGFVTVLAVLSSL 906
TS SSD +M+GSDA +GLPDESAV EYDLI +T AGV+P QDITG SV QD SGTTLSFTRPLAPANKQAISGTPGDETIF+YAFG DNEL FHGLAPNRGSLVLDLFCGDG DGATVAGTPAPTVGGTP ASEASSAAPI DTPTAAPT AVS TPPSSTLS+ XXXXXXXXXXXXXXXXXXX PTG AGMTGSETMAPSAADGDRGVDVPG+T APTDASDSLL+TESPS+AGEGLVEEETDGALRVGGGGRWAAAAATGFVTVLAVLSSL
Sbjct: 72 TSLGFSSDL-MMIGSDAVIGLPDESAVEEYDLISQTTAGVLPSATQDITGGSVSQDASGTTLSFTRPLAPANKQAISGTPGDETIFLYAFGGDNELGFHGLAPNRGSLVLDLFCGDGGDGDGATVAGTPAPTVGGTPTASEASSAAPIAADTPTAAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSGTPPSSTLSVAXXXXXXXXXXXXXXXXXXXGVEGSTSS-----------------PTGAAGMTGSETMAPSAADGDRGVDVPGETRAPTDASDSLLITESPSAAGEGLVEEETDGALRVGGGGRWAAAAATGFVTVLAVLSSL 392
BLAST of mRNA_E-siliculosus-1a_F_contig10151.160.1 vs. uniprot
Match:
A0A6H5JN46_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN46_9PHAE)
HSP 1 Score: 339 bits (870), Expect = 1.190e-112
Identity = 236/307 (76.87%), Postives = 242/307 (78.83%), Query Frame = 1
Query: 1 TSQSVSSDFFLMVGSDAAVGLPDESAVVEYDLIVRTVAGVVPPKAQDITGDSVGQDVSGTTLSFTRPLAPANKQAISGTPGDETIFIYAFGEDNELAFHGLAPNRGSLVLDLFCGDG-DGATVAGTPAPTVGGTPAASEASSAAPIDTDTPTAAPTMAVSRTPPSSTLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGTAGM----TGSETMAPSAADGDRGVDVPGDTGAPTDASDSLLMTESPSSAGEGLVEEETDGALRVGGGGRWAAAAATGFVTVLAVLSSL 906
TS SSD MVGSDA +GLP+ES V EYDL +AGVV QDITG SV QD SGTTLSFTRPLAPANKQAISGTPGDETIFIYAFGE NELAFHG APNRG L LDLFCG+G DGATVAGTPAPT ASEASS API DT TAAPTMAVS TPPSSTLSM XXXXXXXXXXXXXXXXXXXXXXXXXXXX T TGSETMAPSAADGDRGVDVPG+TGAPTDASDSL MTESPSSAGEG V+EETDGALRVGGGGRWAAAAATGFVTVLAVLSSL
Sbjct: 72 TSLGFSSDLS-MVGSDAVIGLPEESTVEEYDLTSHALAGVVLSSTQDITGGSVSQDASGTTLSFTRPLAPANKQAISGTPGDETIFIYAFGEGNELAFHGQAPNRGDLTLDLFCGEGGDGATVAGTPAPTXXXXXXASEASSTAPIAADTLTAAPTMAVSGTPPSSTLSMAPTTVETETGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGVEASTXXXXXXXXXTGSETMAPSAADGDRGVDVPGETGAPTDASDSLRMTESPSSAGEGPVDEETDGALRVGGGGRWAAAAATGFVTVLAVLSSL 377
BLAST of mRNA_E-siliculosus-1a_F_contig10151.160.1 vs. uniprot
Match:
D7FYB8_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB8_ECTSI)
HSP 1 Score: 181 bits (460), Expect = 3.400e-52
Identity = 91/125 (72.80%), Postives = 98/125 (78.40%), Query Frame = 1
Query: 34 MVGSDAAVGLPDESAVVEYDLIVRTVAGVVPPKAQDITGDSVGQDVSGTTLSFTRPLAPANKQAISGTPGDETIFIYAFGEDNELAFHGLAPNRGSLVLDLFCGDG----DGATVAGTPAPTVGG 396
M+GSDA +GLPDES V EYDL +T A V QDITG V QD SGTTLSFTRPLAP NKQAISGTPGDETIF++AFG DNEL +HGL PNRGSLVLDLFCGDG D TV GTPAPT+GG
Sbjct: 1 MIGSDAVIGLPDESTVEEYDLTSQTTARVFSSATQDITGGLVSQDASGTTLSFTRPLAPTNKQAISGTPGDETIFLFAFGADNELGYHGLPPNRGSLVLDLFCGDGGDGSDDVTVVGTPAPTLGG 125
BLAST of mRNA_E-siliculosus-1a_F_contig10151.160.1 vs. uniprot
Match:
D7FJ77_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ77_ECTSI)
HSP 1 Score: 96.7 bits (239), Expect = 1.570e-19
Identity = 69/149 (46.31%), Postives = 83/149 (55.70%), Query Frame = 1
Query: 34 MVGSDAAVGLPDESAVVEYDLIVRTVAGVVPPKAQDITGDSVGQDVSGTTLSFTRPLAPA-NKQAISGTPGDETIFIYAFGEDNELAFHGLAPNRGSLVLDLFCGDGDGATVAGTPAPTV--GGTPAASEASSAAPIDTDTPTAAPTMA 471
+VGSD +GLPD S+V+EY+++ T VV + QDIT S+ Q TTLSF RPL+P NKQ IS GD T I+ G DNEL G V DL+CG G A +A TPAPTV GGT +T PT APT A
Sbjct: 82 LVGSDVIIGLPDNSSVLEYEVLGETAEEVVVFEQQDITEASIVQADGSTTLSFIRPLSPGGNKQNISYVAGDATKLIFGQGADNELGVISDVTWSGMRV-DLYCGTGGIAALARTPAPTVVGGGTG-----------ETPAPTLAPTAA 218
BLAST of mRNA_E-siliculosus-1a_F_contig10151.160.1 vs. uniprot
Match:
A0A6H5JKV6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV6_9PHAE)
HSP 1 Score: 79.3 bits (194), Expect = 7.920e-13
Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 1
Query: 34 MVGSDAAVGLPDESAVVEYDLIVRTVAGVVPPKAQDITGDSVGQDVSGTTLSFTRPLAPAN--KQAISGTPGDETIFIYAFGEDNELAFHGLAPNRGSL-VLDLFCGD 348
MV +DA VGLPDE +EYDL ++ + Q+I+G SV Q S TTL FTRPL+PA+ K +S G++ FI+A+G N +H RG V DL C +
Sbjct: 80 MVPADAVVGLPDEGTALEYDLSTYALSSDNEHETQEISGASVTQADSTTTLVFTRPLSPADDSKTVLSAEEGEKATFIWAYGSSNTFQYHEA---RGDFTVSDLLCSE 184
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10151.160.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 5
0 1 Expect = 6.80e-123 / Id = 71.39 Expect = 1.19e-112 / Id = 76.87 Expect = 3.40e-52 / Id = 72.80 Expect = 1.57e-19 / Id = 46.31 Expect = 7.92e-13 / Id = 42.59 Sequence D7FJ76_ECTSI A0A6H5JN46_9PHAE D7FYB8_ECTSI D7FJ77_ECTSI A0A6H5JKV6_9PHAE back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 0 Stop 1 Cds size 909 Model size 909 Exons 2 Hectar predicted targeting category other localisation BRITE ko00000,ko00001,ko01000 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. U EC 2.1.1.10 EggNOG OGs KOG4293@1,KOG4293@2759 EggNOG free text desc. DOMON domain-containing protein GOs GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0012505,GO:0031410,GO:0031982,GO:0031984,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0097708,GO:0098791 KEGG Pathway ko00270,ko01100,ko01110,map00270,map01100,map01110 KEGG Reaction R00650 KEGG ko ko:K00547 KEGG rclass RC00003,RC00035 Seed eggNOG ortholog 2880.D7G2R8 Seed ortholog evalue 2e-12 Seed ortholog score 80.1 Taxonomic scope Eukaryota
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10151.160.1
>prot_E-siliculosus-1a_F_contig10151.160.1 ID=prot_E-siliculosus-1a_F_contig10151.160.1|Name=mRNA_E-siliculosus-1a_F_contig10151.160.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=303bp
TSQSVSSDFFLMVGSDAAVGLPDESAVVEYDLIVRTVAGVVPPKAQDITG back to top mRNA from alignment at E-siliculosus-1a_F_contig10151:476..1940-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10151.160.1 ID=mRNA_E-siliculosus-1a_F_contig10151.160.1|Name=mRNA_E-siliculosus-1a_F_contig10151.160.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1465bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10151:476..1940- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)ACGAGTCAGAGCGTATCTTCTGACTTCTTCTTGATGGTCGGATCGGACGC
CGCCGTCGGCCTGCCTGACGAGTCTGCTGTCGTGGAGTACGACTTGATAG
TCAGG GTAAGAACTGGGAACAATCGCGTCGATTTGGCATGTCGAGCGACG
TTACTTAAGGTCGAAATTGCACGGTGCTGGAGAGTGAAGCTCCCTCGACA
ATGATTCACAGGTCGCGTTGTTGCCGCACGTATGGCACTGCAGCTGAGGT
TCTTGAATATTTTTTGGCTTTAGAATCTGATGGTGAGAGGATGATTGGAT
GACCGACCCTTTCATAATGAAGCTTCAATACCGTGTTCCACGTTTGTTTC
TCTTTCACGTTCTGTGTTCTGTTTTGAGCATGGCCGAAGACGCAGTGTAA
AACGCACCGATTGCATTTCTTTCTGCACCGCTGTCGTTGGCATGCATAAC
GAACACCCACCGTGGCATGCCATCAAGTGTGACCTGCTTCGCAACTTCCT
GTGGACTGACGACATCTTCCTTTAGACGGCACCCGGTATCCCTGCCTTCC
TTTGCCCTCTCTCCCCGTCCCCGTTGGACTCGCTTATGTCTTTTCCCCGG
CACGACTCGTGACCAACTGTGCCGGCCCAACAACTAAACCCTTATCGCCG
CGAAACGCAAGACGGTCGCGGGAGTGGTGCCCCCCAAAGCCCAAGATATC
ACTGGCGACTCCGTGGGCCAAGACGTGTCCGGCACGACGCTCTCCTTCAC
CCGGCCCCTGGCCCCCGCGAACAAGCAGGCCATCTCGGGAACTCCCGGGG
ACGAGACCATATTCATCTACGCCTTCGGCGAGGACAACGAGCTCGCGTTC
CACGGACTGGCCCCCAACCGGGGGTCCTTGGTCTTGGATCTCTTCTGCGG
GGACGGCGACGGTGCGACGGTCGCTGGAACGCCTGCCCCGACCGTCGGCG
GAACTCCCGCCGCTTCGGAGGCCTCCTCTGCGGCACCAATCGACACCGAC
ACGCCGACGGCGGCGCCCACGATGGCGGTGTCACGAACGCCTCCGTCTTC
GACCCTCTCCATGGCGCCGACGACTTTGGAGTCAGAAACGGGCTCCTCTT
CGGCACCCACGATTGCACCCACCATGGTGGAGTTGGAAACGGGCTCCTCC
TCCGCTCCTTCTGCGGCACCCACCGGCGTTGAGGCGTCCACGTCCTCGCC
CACGGGGACTGCAGGGATGACGGGCTCGGAAACCATGGCGCCGAGCGCCG
CCGATGGTGACAGGGGCGTCGATGTTCCCGGAGACACTGGCGCTCCTACC
GATGCCTCCGATTCGCTGCTGATGACCGAAAGCCCGTCGTCGGCGGGGGA
AGGCCTGGTGGAGGAGGAGACGGACGGCGCTCTCCGCGTGGGAGGCGGGG
GCAGGTGGGCCGCGGCGGCGGCGACTGGGTTCGTGACGGTGCTTGCCGTC
CTGTCGTCGCTCTAG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10151:476..1940-
>mRNA_E-siliculosus-1a_F_contig10151.160.1 ID=mRNA_E-siliculosus-1a_F_contig10151.160.1|Name=mRNA_E-siliculosus-1a_F_contig10151.160.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1818bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10151:476..1940- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top