prot_E-siliculosus-1a_F_contig10142.152.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10142.152.1
Unique Nameprot_E-siliculosus-1a_F_contig10142.152.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length142
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10142.152.1 vs. uniprot
Match: A0A6H5JQD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD2_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 5.560e-40
Identity = 76/139 (54.68%), Postives = 88/139 (63.31%), Query Frame = 0
Query:    2 CGNGRCPRCWCNRHLHLVNMEVECSNTWIGAPERVSGGTGTIRGAPMEDAHDKPKFRWILAPPPCGTDVEIYSNRAALDAKKPGPAGTCTLGKVAFFSQHRGNSLQ-DGGEGLLTRWAAVAEYVTAGVGSSEKSDAVTG 139
            C   RC RCW  R     + E  C N W GAP R SGGTGT+RG P+E A    + RW+ AP PCGTDVEI+    AL A++PGPAGTCTLGKVA+F +H GN  Q +   G  T W AVAEYV+A VG S   DA TG
Sbjct:  219 CSGLRCIRCWKFRVNGFRHTEARCFNNWTGAPARASGGTGTVRGCPVEMAEPNNR-RWMFAPYPCGTDVEIFFTPDALAAQRPGPAGTCTLGKVAYFIEHVGNPPQGEDTRGEPTVWVAVAEYVSAAVGQSTMRDAATG 356          
BLAST of mRNA_E-siliculosus-1a_F_contig10142.152.1 vs. uniprot
Match: A0A6H5KYQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ6_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 1.940e-38
Identity = 76/139 (54.68%), Postives = 88/139 (63.31%), Query Frame = 0
Query:    2 CGNGRCPRCWCNRHLHLVNMEVECSNTWIGAPERVSGGTGTIRGAPMEDAHDKPKFRWILAPPPCGTDVEIYSNRAALDAKKPGPAGTCTLGKVAFFSQHRGNSLQ-DGGEGLLTRWAAVAEYVTAGVGSSEKSDAVTG 139
            C   RC RCW  R     + E  C N W GAP R SGGTGT+RG P+E A    + RW+ AP PCGTDVEI+    AL A++PGPAGTCTLGKVA+F +H GN  Q +   G  T W AVAEYV+A VG S   DA TG
Sbjct:  840 CSGLRCIRCWKFRVNGFRHTEARCFNNWTGAPARASGGTGTVRGCPVEMAEPNNR-RWMFAPYPCGTDVEIFFTPDALAAQRPGPAGTCTLGKVAYFIEHVGNPPQGEDTRGEPTVWVAVAEYVSAAVGQSTMRDAATG 977          
BLAST of mRNA_E-siliculosus-1a_F_contig10142.152.1 vs. uniprot
Match: A0A6H5JF97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF97_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.100e-34
Identity = 70/139 (50.36%), Postives = 88/139 (63.31%), Query Frame = 0
Query:    2 CGNGRCPRCWCNRHLHLVNMEVECSNTWIGAPERVSGGTGTIRGAPMEDAHDKPKFRWILAPPPCGTDVEIYSNRAALDAKKPGPAGTCTLGKVAFFSQHRGNS-LQDGGEGLLTRWAAVAEYVTAGVGSSEKSDAVTG 139
            CG  +CPRCW  R++      V  SN W GAP  VSGG+GT+RG  ++ A    + +W+      GTDVEIYSNR A+ + KPGPAGTC+L +VAFF++H GN  L     G  T W AVAEYVTAG+G  +  DA TG
Sbjct:  658 CGKPQCPRCWKYRNVGFREQRVRFSNNWTGAPSEVSGGSGTLRGGNVQIAKTNDR-QWMAE---SGTDVEIYSNRDAMISNKPGPAGTCSLARVAFFAEHVGNPPLGVDTTGEKTLWVAVAEYVTAGIGQDKFVDAATG 792          
BLAST of mRNA_E-siliculosus-1a_F_contig10142.152.1 vs. uniprot
Match: A0A6H5K7J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7J0_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 2.490e-14
Identity = 33/39 (84.62%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 MCGNGRCPRCWCNRHLHLVNMEVECSNTWIGAPERVSGG 39
            M  NGRCPRCW NRH H VNME ECSNTWIGAPERVSGG
Sbjct:  239 MSENGRCPRCWRNRHPHTVNMEGECSNTWIGAPERVSGG 277          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10142.152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JQD2_9PHAE5.560e-4054.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYQ6_9PHAE1.940e-3854.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF97_9PHAE2.100e-3450.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7J0_9PHAE2.490e-1484.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10142contigE-siliculosus-1a_F_contig10142:880..1305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10142.152.1mRNA_E-siliculosus-1a_F_contig10142.152.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10142 590..1538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10142.152.1 ID=prot_E-siliculosus-1a_F_contig10142.152.1|Name=mRNA_E-siliculosus-1a_F_contig10142.152.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=142bp
MCGNGRCPRCWCNRHLHLVNMEVECSNTWIGAPERVSGGTGTIRGAPMED
AHDKPKFRWILAPPPCGTDVEIYSNRAALDAKKPGPAGTCTLGKVAFFSQ
HRGNSLQDGGEGLLTRWAAVAEYVTAGVGSSEKSDAVTGML*
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