Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match:
D7FLL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL5_ECTSI)
HSP 1 Score: 310 bits (793), Expect = 1.560e-106
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 1
Query: 1 VGLRLAHFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
VGLRL HFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDE+AIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF
Sbjct: 3 VGLRLTHFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDETAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 162
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match:
A0A836CBN1_9STRA (60S ribosomal protein L27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN1_9STRA)
HSP 1 Score: 207 bits (528), Expect = 1.920e-66
Identity = 104/142 (73.24%), Postives = 123/142 (86.62%), Query Frame = 1
Query: 55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
MGIIK+GKVV++LAGRYAGRKAIVVK +D GS +RKF HA+VAGIDRYPR+VTK+MSK K+ KR+K KPFVK+VNVNH+MPTRY DI+LK V+ESA KAS +VRKAV+K+FEERYLNQ +KSEKKA+G KYFF KL F
Sbjct: 1 MGIIKAGKVVIMLAGRYAGRKAIVVKAYDSGSADRKFTHALVAGIDRYPRKVTKSMSKVKVAKRSKCKPFVKFVNVNHLMPTRYTADIELKTVVEESAFKASRPEVRKAVKKVFEERYLNQGQIKSEKKASGSKYFFAKLAF 142
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match:
A0A024GB05_9STRA (Uncharacterized protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GB05_9STRA)
HSP 1 Score: 200 bits (509), Expect = 4.250e-63
Identity = 105/163 (64.42%), Postives = 128/163 (78.53%), Query Frame = 1
Query: 1 VGLRLAHFPVCLAWFEAI-MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKA--SPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
+GL A P + A MGIIK+GKVVVLL GR+AGRKAIVVK FDEG +RK+G AIVAGIDRYPR+VT++M K+KIKK++K+KPFVKYVN NH+MPTRY VDIDLKK +D+ + S + RK ++K+FEERYLNQ D SEKKATGV +FF+KLRF
Sbjct: 12 IGLEAADIPCSRHFLHAENMGIIKNGKVVVLLNGRFAGRKAIVVKAFDEGVGDRKYGFAIVAGIDRYPRKVTRSMGKNKIKKKSKIKPFVKYVNYNHMMPTRYIVDIDLKKVLDDDVMSKPESRVETRKTIKKVFEERYLNQADCSSEKKATGVSFFFKKLRF 174
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match:
M4B173_HYAAE (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=M4B173_HYAAE)
HSP 1 Score: 197 bits (502), Expect = 1.860e-62
Identity = 100/144 (69.44%), Postives = 120/144 (83.33%), Query Frame = 1
Query: 55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDV--RKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
MGI+K+GKVVVLL GR+AGRKAIVVK FDEG +RKFGHAIVAGIDRYPR+VT++MSK K+K+R+K+KPFVKYVN NHIMPTRY DIDLKK +D+ + T + RK ++K+FEERYLNQ KSEKKA GV +FF+KLRF
Sbjct: 1 MGIVKNGKVVVLLNGRFAGRKAIVVKTFDEGRGDRKFGHAIVAGIDRYPRKVTRSMSKAKVKQRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVLGNPETRIESRKTIKKVFEERYLNQGSCKSEKKAAGVSFFFKKLRF 144
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match:
A0A2D4BF17_PYTIN (60S ribosomal protein L27 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2D4BF17_PYTIN)
HSP 1 Score: 193 bits (490), Expect = 1.250e-60
Identity = 96/145 (66.21%), Postives = 123/145 (84.83%), Query Frame = 1
Query: 55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPT---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
MGI+K+GKVV++L GR+AGRKA+VVK DEG +RKFGHAIVAGIDRYPR+VT+AMSK K+KK++K+KPF+K VN++H+MPTRY VDIDLKK +D+ + A+P + RK ++K+FEERYLNQ VKSEKKA GV +FF+KLRF
Sbjct: 1 MGIVKNGKVVIMLNGRFAGRKAVVVKTHDEGHGDRKFGHAIVAGIDRYPRKVTRAMSKTKLKKKSKVKPFIKVVNLSHVMPTRYVVDIDLKKVLDDEVL-ANPESRIESRKTIKKVFEERYLNQSAVKSEKKAAGVSFFFKKLRF 144
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match:
A0A0W8DKH9_PHYNI (Platelet-activating factor acetylhydrolase IB subunit alpha n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DKH9_PHYNI)
HSP 1 Score: 194 bits (492), Expect = 1.530e-60
Identity = 99/148 (66.89%), Postives = 122/148 (82.43%), Query Frame = 1
Query: 46 EAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPT---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
+ ++ +K+GKVVVLL GR+AGRKAIVVK FDEG +RKFGHAIVAGIDRYPR+VT+AM K+K+KKR+K+KPFVKYVN NHIMPTRY DIDLKK +D+ + A+P + RK ++K+FEERYLNQ KSEKKA GV +FF+KLRF
Sbjct: 26 DLLLCSVKNGKVVVLLNGRFAGRKAIVVKTFDEGKGDRKFGHAIVAGIDRYPRKVTRAMGKNKLKKRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVL-ANPESRIESRKTIKKVFEERYLNQAACKSEKKAAGVSFFFKKLRF 172
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match:
A0A7S4SWS4_9DINO (60S ribosomal protein L27 (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SWS4_9DINO)
HSP 1 Score: 192 bits (488), Expect = 2.430e-60
Identity = 94/136 (69.12%), Postives = 117/136 (86.03%), Query Frame = 1
Query: 55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYF 462
MGIIKSGKVVV+LAGRYAGRKA+VVK +D+GS +RKF HA+V GIDRYP++VTK M+K KI KR+K+KPF+K +N+NH+MPTRY VD+DLKK VDE+A K + + RK V+KIFE+RYLNQ KSEKKA+GV+YF
Sbjct: 8 MGIIKSGKVVVVLAGRYAGRKAVVVKTYDDGSIDRKFSHAMVVGIDRYPKKVTKGMTKTKITKRSKMKPFLKCINLNHLMPTRYSVDMDLKKTVDEAAFKEAKKETRKTVKKIFEDRYLNQASGKSEKKASGVQYF 143
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match:
A0A6U1L5V7_9STRA (60S ribosomal protein L27 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1L5V7_9STRA)
HSP 1 Score: 190 bits (482), Expect = 1.930e-59
Identity = 90/142 (63.38%), Postives = 116/142 (81.69%), Query Frame = 1
Query: 55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
MG+IKSGKVV++L GR+AGRKAIVVK +D+G+ R+F HA+VAGIDR PR+VT++MSK+KI+KRTK+KPF+KYVN H+MPTRY VD+DLKK VDES +K + RKA++K+FEERY Q K EKKA G YF++K+ F
Sbjct: 1 MGVIKSGKVVIVLQGRFAGRKAIVVKAYDDGNAERRFAHAMVAGIDRAPRKVTRSMSKEKIQKRTKMKPFLKYVNYTHLMPTRYVVDLDLKKIVDESGLKEGKAEARKAIKKVFEERYHQQSSAKXEKKAAGTMYFYKKMAF 142
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match:
A0A812X5C3_SYMMI (60S ribosomal protein L27 (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X5C3_SYMMI)
HSP 1 Score: 187 bits (475), Expect = 2.030e-58
Identity = 97/140 (69.29%), Postives = 114/140 (81.43%), Query Frame = 1
Query: 64 IKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASP-TDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
IKSGKVV+LLAGRYAGRKA+VVK D+GS+ ++FGHAIVAGIDRYPR+V KAM K KI+KRTK+KPFVK VN NHIMPTRY D DLKK VDE A+ + D RK ++K+FEE+Y NQ KSEKKA G +YFF+KLRF
Sbjct: 1 IKSGKVVILLAGRYAGRKAVVVKTNDDGSDGKRFGHAIVAGIDRYPRKVVKAMGKAKIEKRTKIKPFVKVVNFNHIMPTRYAADFDLKKVVDEKALSSEARVDTRKNLKKVFEEKYRNQSS-KSEKKAGGTQYFFKKLRF 139
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match:
A0A397BII5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A397BII5_9STRA)
HSP 1 Score: 186 bits (473), Expect = 7.080e-58
Identity = 94/142 (66.20%), Postives = 117/142 (82.39%), Query Frame = 1
Query: 64 IKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPT---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
+K+GKVVVLL GRYAGRKAIVVK +DEG +RKFGHAIVAGIDRYPR++T++M K K+ KR+K+KPFVKYVN NHI+PTRY DI+LKK VD+ + A+P + RK ++K+FE+RYLNQ KSEKKA GV +FF+KLRF
Sbjct: 16 VKNGKVVVLLNGRYAGRKAIVVKTYDEGHGDRKFGHAIVAGIDRYPRKITRSMGKKKVTKRSKIKPFVKYVNYNHILPTRYVADIELKKVVDDEVL-ATPEARIESRKIIKKVFEDRYLNQGATKSEKKAAGVSFFFKKLRF 156
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.56e-106 / Id = 98.75 Expect = 1.92e-66 / Id = 73.24 Expect = 4.25e-63 / Id = 64.42 Expect = 1.86e-62 / Id = 69.44 Expect = 1.25e-60 / Id = 66.21 Expect = 1.53e-60 / Id = 66.89 Expect = 2.43e-60 / Id = 69.12 Expect = 1.93e-59 / Id = 63.38 Expect = 2.03e-58 / Id = 69.29 Expect = 7.08e-58 / Id = 66.20 Sequence D7FLL5_ECTSI A0A836CBN1_9STRA A0A024GB05_9STRA M4B173_HYAAE A0A2D4BF17_PYTIN A0A0W8DKH9_PHYNI A0A7S4SWS4_9DINO A0A6U1L5V7_9STRA A0A812X5C3_SYMMI A0A397BII5_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 0 Stop 1 Cds size 483 Model size 483 Exons 4 Ec32 ortholog Ec-17_000680.1 Ec32 ortholog description Ribosomal protein L27e Hectar predicted targeting category other localisation BRITE br01610,ko00000,ko00001,ko00002,ko03011 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. J EggNOG OGs COG2163@1,KOG3418@2759 EggNOG free text desc. ribosomal large subunit biogenesis GOs GO:0000184,GO:0000956,GO:0002181,GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005844,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0012505,GO:0014070,GO:0015031,GO:0015833,GO:0015934,GO:0016020,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030684,GO:0030687,GO:0030867,GO:0031090,GO:0031960,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0033993,GO:0034101,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042175,GO:0042221,GO:0042254,GO:0042592,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048513,GO:0048519,GO:0048534,GO:0048545,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051385,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0065008,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097305,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098827,GO:1901360,GO:1901361,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901654,GO:1901700,GO:1904044,GO:1990904 KEGG Module M00177 KEGG Pathway ko00563,ko01100,ko03010,map00563,map01100,map03010 KEGG Reaction R05923,R08107 KEGG ko ko:K02901,ko:K05288 KEGG rclass RC00017 Preferred name RPL27 Seed eggNOG ortholog 2880.D7FLL5 Seed ortholog evalue 1.1e-81 Seed ortholog score 309.3 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1014.150.1
>prot_E-siliculosus-1a_F_contig1014.150.1 ID=prot_E-siliculosus-1a_F_contig1014.150.1|Name=mRNA_E-siliculosus-1a_F_contig1014.150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=161bp
VGLRLAHFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGS back to top mRNA from alignment at E-siliculosus-1a_F_contig1014:21068..26209+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1014.150.1 ID=mRNA_E-siliculosus-1a_F_contig1014.150.1|Name=mRNA_E-siliculosus-1a_F_contig1014.150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5142bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1014:21068..26209+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GTGGGCTTGCGCTTGGCCCACTTTCCTGTGTGTCTCGCCTGGTTCGAAGC
CATCATGGGGAT GTGAGTGTACTGGGTAGCTGGGTTCAGGTTGACATACC
TTGGGTGTCTCCCCTGCTCCTTTGCGTCGATTGTGGTGGCTATTCGTACG
CGATGGTGTGTTTCGAGGCGGTTGCGTCGTGGATGCCCGCCCTCTCTTGT
CTCCCTCCCTCCAGCGGCAGCGTGAACTCGCCTGGTAACACTGCCCCCTG
CGTAAGTTATGCCGGCGTGGCTTCAGCGATAGCACAGCAGTCGACGATTC
CGATAGATCCTGCATGTCTAAGAGTCCCGTGGTGTTCTGGTTGGTTTCCT
TTCTCTTGCGCAACAACTCTCAACCTGACAACCGTCCCTCTCTCTCCCTC
CTGCCCACACACGAACCCCTTGCCGCCTGACGGGGAACAGCATCAAGTCG
GGCAAGGTCGTTGTCCTGCTGGCCGGGCGCTACGCTGGCCGCAAGGCTAT
CGTGGTGAAGCCTTTCGACGAGGGCTCCGAGAACCGCAAGTTCGGCCACG
CCATCGTGGCTGGCATCGACCGCTACCCTCGCAGG GTAAGAAACACAGAA
AATATCTGGAGAAAAACAACGGGTGGCATGCACCCCGCTGCTGCAGTTAC
GGTAGCACTCTCCTGGACGACTATGTCAAGCGCTTAGAAGACGGTATAGC
AGCACTTCGCAATCGATGCCCTTCTACTGTTGTAGCTTTGGTGGTGCAGC
GCTGAAGAAAGAAACGAAGCCTATTGAGACATTCCACGTATGTAGCACCC
GGTGCCTTGTCCAGGAGACACCACTCCCCTTTTCGTACGGAAGACACTAC
ACCCCCTATACCTTGCAAATGGACACAGGAGCAGTCGATGCTTCCATACA
GAGCTGCAGAGATTTTCTTTTGTAATATTCTAGCGGCAATGGGAGTCGTT
GGTATTGTCTGGTGGAGAGCCAAGAAGGATATGGGCACGGTTTTGTGTTG
CTAATGACATATACTCCTCATTAACCACTTTCTATCGGTACTGCTGTACT
GTCGACGTCCGAAAATCAGTCAGGGGGATACAGATACAGCAGTAAAGAGT
CGAACGGTGCAGCATCTCAATCTCATCCAACAGGCGGTGTACGACAAATA
CGCAAATACGGCGCACGTGTCCCCCCCCCCCCGTTGAAAAGAACCTAGGT
TTTCGAGTGCGCCGGTTTTCCCGGCTTCTTCGACTTTTGATGTTTGATGG
CCTTCGCGTTGAAATTCTTATCATACTAGACGGACGTACCGCCGTAGCCT
CTTTTAGTGTGCTACGACGAATAGCGGTGAGTTGTACAGCAAGGAAGAGA
CGTGTAACACCCCGCCCTGACGTTGAACCAACAGAATCGGCGGTGGCCTA
TTTTTTGTTTTGTTTTTTTGCCATTCCGATCCCCACAGCCGACATTCCGA
GGAGCCTTGCTCTTTTTTACTTTTTTTCACCCTGCTGTCTCGCCGGTGTT
GCGTTGATCCAAGCAGCGCATGTGTGTGTAATGCTCTCTCCTCGTTTTTC
CTCTCCTCTATGCATACGACCGGAATGCAAAAACAGGTGACGAAGGCGAT
GAGCAAGGACAAGATCAAGAAGCGCACGAAGCTGAAGCCGTTCGTCAAGT
ACGTCAACGTTAACCACATCATGCCCACCCG GTAAGTCTTGGGACCTAAG
GCACGCACGCTTTCTGTCTCCGACCGCACCTCCCCCAACTCCACTCGCCG
CCCACCCCACCTCTATTTTGATTGACTCAAAGAGGGGGGGCTGGCAGGAG
GTGTACCCTGGAAGCTCGCAGTTTTTTGCGGTTGTCCGTATCGTCCAAAT
CGATATTTCGTAACAAGGAGGAGGGTGTTCGTGTCAAGGAGATGCTTTCG
TCAAAAGCATGTTTTTCTTTGGCAAACGCACCTTCCCCTTTGTTGAGATG
ACGACGGCGACGATACGCTTTAACTACGAGCTTTGCGGTACACTATCCTA
ACGGTGAGAGGGGTGGGGAGTTGAAGGGCAGGAGAGAGAAGGCGTGGTCA
GTGTGCGGCGACGCAGTCCCCGGTCATGGAACGGTTTACCGTACCGTACA
TCCCCGCAAGAGACACCCCCGCTCCACCTCACGCGGGTGATTATCCAGAG
TCGATTGCACAAACAGAAAGAGGAGAGAGTGGGTGTCATTACGCGAAAGA
GCATCTTCGAAAAATCGCGATCCTGAGTTGAGCATTCCACGAATGTTTCC
CTCGTCGAGGTTTTTGCCGATTGTCCTCTTTCGTGTTTTGCACCGCCCTC
CCTTCCTGTGGTGACTATCGAGCTTAGATATTCGTTCCCGCAAGAGGGGG
TGGGTGGCGGTAGTCTCTTGTTGGATGTGCGGCACACAAACCCTGATCCC
ACCCCCCAGCACTTGACCGGCCCCAGTTTCCGTGGAGTGAAGGTGAAAGG
GGTGGGGGTAGGGGGGTTCAACCTGTTCTTGGTCGTGAGCTTTTCGAGTG
ATGAGTGAAGCTGTTGTACCTTCTTTTTTTTTTTGTGGTTTCTCTTTACA
AGTATCTGCAGCGATGCAAACGTCATGCCCGTTGCTGGAACACGCATAAA
TCTGGCCTGTTCCCGATGCGCGTCAAGTGGATCACACACTGCCGCGTATG
TGCGGACGACCATTTGGAATACGACATTTTGATCTCTTTCGAGCAACTCG
TGGCTAACGAACACTTGAAGAAGTCCAACTCGCTCGGGTCTTCAAGAGAG
GCACAAACAAAATCTATCGCCTTTCCGTCGAAATCTCGACGTTGGCGGGG
CTCGCCCGGCGTGCTGCGGTCAGCCCATGTCGGATAGTGTCTCGTGGATT
TTGTTCCGGCCCAGCGTTTGATACGGTTATGTTCGGGTGACCTTTGCATC
TCGATGGGCGTTGGTATTTCCACGTCTGTTTGCTTGTCTGGAGGTACGCG
TACCTTTGGGGGTATTGGTCGCTCCGTCCAATGGACATGCCCAAACGAAG
ATCGGGCACATGATGCCCCGAAGCCATGGTTTTTCGAAGCCGCATACTTA
CGGGGCTGGAAACCTTTATTTTCCCACCGCACGAGAAATGGTGTATCTGG
TCGCGTTCACCTGGAGATAAACATAAGTGAGCAGCGTCTGCAAGACACGA
AAGAAAGCCGTCTCTGCAAAAGGCCAAGACACTTGTCGCACGCGCAAAAA
CCGAGCCCATTTCCGCGAAGAATAGTGTATCGTAAACCTCCCACCCTTTC
CCCCCATAAAATGTGATGGATCAAATTCACATTTTCGGAAACATGGTGTT
TCGGTTGTTCATTTTTTCTCGGCGTATTAGTTTTTGAAACGAAAAAGGTT
CTTTTTGAAAAGAACCACGGCGGATGTTCCCGATGTGTACATCCGACCGG
CGGATTTCACCTGCAGACGTCTCGGGGCGTCGATCACCAGACGGTGATGC
CCGAAAGAATGTTTGGTGTTCGAACGGGAGTCTGGCTAACACGTGTTCTG
TGCTCTTGGCACGATTTCATGAGAGAGAGAGAGCAGCCGTGCCAAGAGCA
CGTGAACGTGTATGGCCAGACTCCCGTTCGAACACATCAACATTCCTTCG
GGCGTCACCGTCGTTTGATCGTCGCACCGGGACGTTTCATGAGCGAGAGA
GAAACGTTAAATGTTTTTTGTCCTTCCCCCGTCCGCTTTCCGGGGGAGAC
GGATGTTGTTCCTGTGGGGCCGCCTCTTACAACAAACCCAGTTTTCGGCA
GCAGCCGTGTGAGAGAATTGCCGCACGCGTGTTCGATCGACCCGATGCTG
CGCCGAAACGTCTCCCAAGCACGCGCTAGTGACACTACCGCAGTATGGTA
TCGCCATGACGCCCTTGCAAGCCTTTTATTGTTCCCCCAAGTATTTTATC
CAGTCTCGTTTTCGAAGAATGAGAAACGGTCGAGTGGAGACGCGAGACCG
ATTCGTATTGCTAGATTGGCTCGTGCTTTTCCTAGATGCGATTAATGCTC
CCCTGAAAATTTTAACCAGTTCTTTTTTTTCTTCTCACAAAAGGGTAGGC
TCTGCTGCCGATATCGGAACGACCTATCCAAAACAGCCTCCTCATTGAGC
CGTCTCCTCATGTGTGTCTCTGGCCTCTTTCGGGTTTCGAAGGGCGCCTT
CTCTCTGGTCTATCTTGTCTGCACCGAGTTGGGGCGGGGGTACGTCCTTT
GCCTTCGTCTATAACTCGTCGGTTAAGTTGCCTTGCGTTGGGCGATATGG
TCGGAGAGATGGATGCTTGGAGGCACGTTTGATTGTTCGAATATACATCT
TCGGCGCCCATACCTTGAGCACATGTAGAAGAGCGCACCTAGCTATCATC
CCGGCGAACTGTAGCGGTTTGACCGCTTGAAAAGAACCGGGGCCAGCATC
TCCAGAGACCCTTCTTGATGATTGTCGAGCTGCCGCCAGTCGAGCGATAT
TAGTCTCGGGGCTGTTGCGCTCGCGAATCCAGTATCGGAATCGAAATGGC
TGGACCGATGTCTCTCTGCGCCCAGAAAGTTTTGTTACGCGATGGAGAAG
CATGCACTCAGAACACAACCCACCCGTCCCTTGGCGCATGAATCGCAAGT
TTCGGGGGGTGTGGTGATGGCTACGGCTTGAACAGTCACGCACAGACGAT
ACGTGTGCGTGGTCCACGTCACTGGCATCGTGCCCTTCTTGGTCCCCCCC
TCAAAGCCATTCCTGACACTGCTCTCCTGGTACAGTTTCACCGCCTCCTC
ACTGTGTTGTGCTGACAACGTGATGGCCCCATGGCGATGTCTTGGACAAG
GGCATAGAGGAGCCGAGAGGTGCCCACACCCGTAATCTCCCGAGAACGGG
CACAAGGCTCTCACTGCCCGTTCAGGGGTAGAAAAGGAGTTTTACGGAAC
GATGCAGATTGCGATGATGCCGCCGCCCTTCCCTTTGCCGCCCTCGTGAC
GGATCGATCAGGTACCAGGTGGACATCGACCTCAAGAAGGCCGTGGATGA
GTCTGCCATCAAGGCCTCCCCGACCGACGTTCGCAAGGCGGTGAGGAAGA
TCTTCGAGGAGAGGTACCTAAACCAGAAGGACGTCAAGTCCGAGAAGAAG
GCCACCGGCGTGAAGTACTTCTTCGAGAAGCTCCGCTTCTAA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1014:21068..26209+
>mRNA_E-siliculosus-1a_F_contig1014.150.1 ID=mRNA_E-siliculosus-1a_F_contig1014.150.1|Name=mRNA_E-siliculosus-1a_F_contig1014.150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=966bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1014:21068..26209+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top