mRNA_E-siliculosus-1a_F_contig1014.150.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: D7FLL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL5_ECTSI) HSP 1 Score: 310 bits (793), Expect = 1.560e-106 Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 1 Query: 1 VGLRLAHFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
VGLRL HFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDE+AIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF
Sbjct: 3 VGLRLTHFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDETAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 162
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A836CBN1_9STRA (60S ribosomal protein L27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN1_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.920e-66 Identity = 104/142 (73.24%), Postives = 123/142 (86.62%), Query Frame = 1 Query: 55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
MGIIK+GKVV++LAGRYAGRKAIVVK +D GS +RKF HA+VAGIDRYPR+VTK+MSK K+ KR+K KPFVK+VNVNH+MPTRY DI+LK V+ESA KAS +VRKAV+K+FEERYLNQ +KSEKKA+G KYFF KL F
Sbjct: 1 MGIIKAGKVVIMLAGRYAGRKAIVVKAYDSGSADRKFTHALVAGIDRYPRKVTKSMSKVKVAKRSKCKPFVKFVNVNHLMPTRYTADIELKTVVEESAFKASRPEVRKAVKKVFEERYLNQGQIKSEKKASGSKYFFAKLAF 142
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A024GB05_9STRA (Uncharacterized protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GB05_9STRA) HSP 1 Score: 200 bits (509), Expect = 4.250e-63 Identity = 105/163 (64.42%), Postives = 128/163 (78.53%), Query Frame = 1 Query: 1 VGLRLAHFPVCLAWFEAI-MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKA--SPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
+GL A P + A MGIIK+GKVVVLL GR+AGRKAIVVK FDEG +RK+G AIVAGIDRYPR+VT++M K+KIKK++K+KPFVKYVN NH+MPTRY VDIDLKK +D+ + S + RK ++K+FEERYLNQ D SEKKATGV +FF+KLRF
Sbjct: 12 IGLEAADIPCSRHFLHAENMGIIKNGKVVVLLNGRFAGRKAIVVKAFDEGVGDRKYGFAIVAGIDRYPRKVTRSMGKNKIKKKSKIKPFVKYVNYNHMMPTRYIVDIDLKKVLDDDVMSKPESRVETRKTIKKVFEERYLNQADCSSEKKATGVSFFFKKLRF 174
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: M4B173_HYAAE (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=M4B173_HYAAE) HSP 1 Score: 197 bits (502), Expect = 1.860e-62 Identity = 100/144 (69.44%), Postives = 120/144 (83.33%), Query Frame = 1 Query: 55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDV--RKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
MGI+K+GKVVVLL GR+AGRKAIVVK FDEG +RKFGHAIVAGIDRYPR+VT++MSK K+K+R+K+KPFVKYVN NHIMPTRY DIDLKK +D+ + T + RK ++K+FEERYLNQ KSEKKA GV +FF+KLRF
Sbjct: 1 MGIVKNGKVVVLLNGRFAGRKAIVVKTFDEGRGDRKFGHAIVAGIDRYPRKVTRSMSKAKVKQRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVLGNPETRIESRKTIKKVFEERYLNQGSCKSEKKAAGVSFFFKKLRF 144
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A2D4BF17_PYTIN (60S ribosomal protein L27 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2D4BF17_PYTIN) HSP 1 Score: 193 bits (490), Expect = 1.250e-60 Identity = 96/145 (66.21%), Postives = 123/145 (84.83%), Query Frame = 1 Query: 55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPT---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
MGI+K+GKVV++L GR+AGRKA+VVK DEG +RKFGHAIVAGIDRYPR+VT+AMSK K+KK++K+KPF+K VN++H+MPTRY VDIDLKK +D+ + A+P + RK ++K+FEERYLNQ VKSEKKA GV +FF+KLRF
Sbjct: 1 MGIVKNGKVVIMLNGRFAGRKAVVVKTHDEGHGDRKFGHAIVAGIDRYPRKVTRAMSKTKLKKKSKVKPFIKVVNLSHVMPTRYVVDIDLKKVLDDEVL-ANPESRIESRKTIKKVFEERYLNQSAVKSEKKAAGVSFFFKKLRF 144
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A0W8DKH9_PHYNI (Platelet-activating factor acetylhydrolase IB subunit alpha n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DKH9_PHYNI) HSP 1 Score: 194 bits (492), Expect = 1.530e-60 Identity = 99/148 (66.89%), Postives = 122/148 (82.43%), Query Frame = 1 Query: 46 EAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPT---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
+ ++ +K+GKVVVLL GR+AGRKAIVVK FDEG +RKFGHAIVAGIDRYPR+VT+AM K+K+KKR+K+KPFVKYVN NHIMPTRY DIDLKK +D+ + A+P + RK ++K+FEERYLNQ KSEKKA GV +FF+KLRF
Sbjct: 26 DLLLCSVKNGKVVVLLNGRFAGRKAIVVKTFDEGKGDRKFGHAIVAGIDRYPRKVTRAMGKNKLKKRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVL-ANPESRIESRKTIKKVFEERYLNQAACKSEKKAAGVSFFFKKLRF 172
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A7S4SWS4_9DINO (60S ribosomal protein L27 (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SWS4_9DINO) HSP 1 Score: 192 bits (488), Expect = 2.430e-60 Identity = 94/136 (69.12%), Postives = 117/136 (86.03%), Query Frame = 1 Query: 55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYF 462
MGIIKSGKVVV+LAGRYAGRKA+VVK +D+GS +RKF HA+V GIDRYP++VTK M+K KI KR+K+KPF+K +N+NH+MPTRY VD+DLKK VDE+A K + + RK V+KIFE+RYLNQ KSEKKA+GV+YF
Sbjct: 8 MGIIKSGKVVVVLAGRYAGRKAVVVKTYDDGSIDRKFSHAMVVGIDRYPKKVTKGMTKTKITKRSKMKPFLKCINLNHLMPTRYSVDMDLKKTVDEAAFKEAKKETRKTVKKIFEDRYLNQASGKSEKKASGVQYF 143
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A6U1L5V7_9STRA (60S ribosomal protein L27 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1L5V7_9STRA) HSP 1 Score: 190 bits (482), Expect = 1.930e-59 Identity = 90/142 (63.38%), Postives = 116/142 (81.69%), Query Frame = 1 Query: 55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
MG+IKSGKVV++L GR+AGRKAIVVK +D+G+ R+F HA+VAGIDR PR+VT++MSK+KI+KRTK+KPF+KYVN H+MPTRY VD+DLKK VDES +K + RKA++K+FEERY Q K EKKA G YF++K+ F
Sbjct: 1 MGVIKSGKVVIVLQGRFAGRKAIVVKAYDDGNAERRFAHAMVAGIDRAPRKVTRSMSKEKIQKRTKMKPFLKYVNYTHLMPTRYVVDLDLKKIVDESGLKEGKAEARKAIKKVFEERYHQQSSAKXEKKAAGTMYFYKKMAF 142
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A812X5C3_SYMMI (60S ribosomal protein L27 (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X5C3_SYMMI) HSP 1 Score: 187 bits (475), Expect = 2.030e-58 Identity = 97/140 (69.29%), Postives = 114/140 (81.43%), Query Frame = 1 Query: 64 IKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASP-TDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
IKSGKVV+LLAGRYAGRKA+VVK D+GS+ ++FGHAIVAGIDRYPR+V KAM K KI+KRTK+KPFVK VN NHIMPTRY D DLKK VDE A+ + D RK ++K+FEE+Y NQ KSEKKA G +YFF+KLRF
Sbjct: 1 IKSGKVVILLAGRYAGRKAVVVKTNDDGSDGKRFGHAIVAGIDRYPRKVVKAMGKAKIEKRTKIKPFVKVVNFNHIMPTRYAADFDLKKVVDEKALSSEARVDTRKNLKKVFEEKYRNQSS-KSEKKAGGTQYFFKKLRF 139
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A397BII5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A397BII5_9STRA) HSP 1 Score: 186 bits (473), Expect = 7.080e-58 Identity = 94/142 (66.20%), Postives = 117/142 (82.39%), Query Frame = 1 Query: 64 IKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPT---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
+K+GKVVVLL GRYAGRKAIVVK +DEG +RKFGHAIVAGIDRYPR++T++M K K+ KR+K+KPFVKYVN NHI+PTRY DI+LKK VD+ + A+P + RK ++K+FE+RYLNQ KSEKKA GV +FF+KLRF
Sbjct: 16 VKNGKVVVLLNGRYAGRKAIVVKTYDEGHGDRKFGHAIVAGIDRYPRKITRSMGKKKVTKRSKIKPFVKYVNYNHILPTRYVADIELKKVVDDEVL-ATPEARIESRKIIKKVFEDRYLNQGATKSEKKAAGVSFFFKKLRF 156 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1014.150.1 >prot_E-siliculosus-1a_F_contig1014.150.1 ID=prot_E-siliculosus-1a_F_contig1014.150.1|Name=mRNA_E-siliculosus-1a_F_contig1014.150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=161bp VGLRLAHFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSback to top mRNA from alignment at E-siliculosus-1a_F_contig1014:21068..26209+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1014.150.1 ID=mRNA_E-siliculosus-1a_F_contig1014.150.1|Name=mRNA_E-siliculosus-1a_F_contig1014.150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5142bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1014:21068..26209+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1014:21068..26209+ >mRNA_E-siliculosus-1a_F_contig1014.150.1 ID=mRNA_E-siliculosus-1a_F_contig1014.150.1|Name=mRNA_E-siliculosus-1a_F_contig1014.150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=966bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1014:21068..26209+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |