mRNA_E-siliculosus-1a_F_contig1014.147.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1014.147.1 vs. uniprot
Match: D7FLL8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL8_ECTSI) HSP 1 Score: 1197 bits (3096), Expect = 0.000e+0 Identity = 643/696 (92.39%), Postives = 650/696 (93.39%), Query Frame = 1 Query: 136 MLRSCNLSPPLPAGYSRGVRKRCAMAAFTTANEITTMGHKKGGVFCLRGGSDAEGDALQVGGEEENVKRETPTATRASAADSEDEAWPGAEEEGAPFGGVALVTERSTATGGSKDRVSYSVLADGTLEVGLAAERKEPRLPTSTAPSKPXXXXXXXPPSRENTAVANAPAGSRRVLQGVRRHAGDLKTGVVEATKEVSRETRAAAAAAGACVARAGVAVRGGLMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTEFLGQALGSTEGRSGTRGSEQDXXXXXXXXXXXXXXXXXGEERKGPALDWMGRIRDQGSPPESVAVLSPFAAARRERILVLPGWFRALKPWGDFLQIHVGVPVRALVGEADDLLWLTSLYHDERSMVGVQVSYKPLGARMETTVNLALREDASPEDRLHAMFQANVIHHLVVRDPDGIPHGEDGVDRTLFLRKVTEEALRVTRKEFPAFRKALVREGWDLSRVTLGGGSWVGRWGSLAKED 2223
M+ SCN SPPLPAGYSRGVRKRCA+AAFTTANE+TTMGHKKGGVFCLRGGSD EGDAL VGGEEE VKRETPTATRASAADSE EAWPGAEEEG PFGGVALVTERSTATGGSKDR +LP STAPS P PPSRENTAVANA A RRVLQGVRR AGDLKTG+VEATKEV+RETRAAAAAAGACVARAGVAVRGGLMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTE+LGQALGSTEGRSGTRGSEQ XXXXXXXXXXXXXXXX GEERKGPALDWMGRIRDQGSPPESVAVLSPFAAARRERILVLPGWFRALKPWGDFLQIHVGVPVRALVGEADDLLWLTSLYHDERSMVGVQVSYKPLGARMETTVNLALREDASPEDRLHAMFQANVI HLVVRDPDGIPHGEDGVDRTLFLRKVTEEALRVTRKEFPAFRKALVREGWDLSRVTLGGG WVGRWGSLAKED
Sbjct: 1 MMPSCNFSPPLPAGYSRGVRKRCAIAAFTTANEMTTMGHKKGGVFCLRGGSD-EGDALHVGGEEEKVKRETPTATRASAADSEGEAWPGAEEEGTPFGGVALVTERSTATGGSKDR----------------------QLPASTAPSPPPHLPTIPPPSRENTAVANASAEPRRVLQGVRRCAGDLKTGLVEATKEVARETRAAAAAAGACVARAGVAVRGGLMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTEYLGQALGSTEGRSGTRGSEQXXXXXXXXXXXXXXXXXGGEERKGPALDWMGRIRDQGSPPESVAVLSPFAAARRERILVLPGWFRALKPWGDFLQIHVGVPVRALVGEADDLLWLTSLYHDERSMVGVQVSYKPLGARMETTVNLALREDASPEDRLHAMFQANVIQHLVVRDPDGIPHGEDGVDRTLFLRKVTEEALRVTRKEFPAFRKALVREGWDLSRVTLGGGPWVGRWGSLAKED 673
BLAST of mRNA_E-siliculosus-1a_F_contig1014.147.1 vs. uniprot
Match: W7U3D2_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3D2_9STRA) HSP 1 Score: 286 bits (733), Expect = 3.740e-84 Identity = 193/488 (39.55%), Postives = 252/488 (51.64%), Query Frame = 1 Query: 802 LMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTEFLGQALGSTEGRSGTRGSEQDXXXXXXXXXXXXXXXXXGEERKGPALDWMGRIRDQGSPPESVAVLSPFAAARRERILVLPGWFRALKPWGDFLQ--------------------IHVGVPVRALVGEADDLLWLTSLYHDERSMVG-VQVSYKPLGARMETT---VNLALREDASPEDRLHAMFQANVIHHLVVRDPDGIPHGEDGVDRTLFLRKVTEEALRVTRKEFPAFRKALVREGWDLSRVTLGGGSWV 2193
L FLP G+P SV PEY+RY+ W+++QDLS++LRG+LATQA+LEG+GVGR G+TPLAATLQW+ RDGASM+ GL+FTS S NFGVN K+WRLFAD DIG+ L+MLAPL F + FL IC+ASV K+ CG+A GA+ I EH A NN+A++ AK GAQHT SL GLG +WFAR + S RVW Y +LT++HL ANYAAMR LA S+N R ++L+T F E+ +VLSP ARRE I+V G +R K W Q I +GV V+ L A+ L L L+ E+ M+ V V L R T + +ALREDA+ L A A+ L+ R + G + + V + + FP + L R+GW+L RV L W+
Sbjct: 136 LHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPL--FPKN--FLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVAN----QSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFR----------------------------------------------------------ENASVLSPAEVARRETIIVDVGRWRPPKLWTALFQKGKRRATAELAKDAHAPIWNIRLGVRVKDLTRFAEGLTELQRLFSQEQYMLNMVNVFDGELPTRKVTRKIQIAVALREDATNLTLLKACLHAD----LIARRGFEAVKRKKGTENIEIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSPEGWI 553
BLAST of mRNA_E-siliculosus-1a_F_contig1014.147.1 vs. uniprot
Match: A0A7S0EV14_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EV14_9CRYP) HSP 1 Score: 252 bits (644), Expect = 1.770e-72 Identity = 160/397 (40.30%), Postives = 228/397 (57.43%), Query Frame = 1 Query: 811 TFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTEFLGQALGSTEGRSGTRGSEQDXXXXXXXXXXXXXXXXXGEERKGPALDWMGRIRDQGSPPESVAVLSPFAAARRERILVLPGWFRALKPWGDFLQIHVGVPVRALVGEADDLLWLTSLYHDERSMVGVQVSYKPLGARMETTVNLALREDASPEDRLHAMFQANVI 2001
TFLP+GYP S+ EY +Y+ +++LQDL+S+LRG+L+TQ +LEGMGVG+AG T LAAT+QWMARDG+SM+GGLLFT+ AS++FG++IK WRLFAD ND+ L L+MLAP A+ E FL +IC++SVFKA CGV+ GA AAI +HWA NIAD+GAK GAQHT+ S+L L L FA+A + +S +W + VLT +H+ A Y+ MRTLALR L ++ ++ + L D + + ++P A+ +++L LP W A P+ F ++ GV + ++ L L SL+ E+ MV Q P A+ V + + E+++P D L A A+VI
Sbjct: 65 TFLPSGYPASLPDEYTKYQAYNLLQDLTSNLRGILSTQKILEGMGVGKAGVTSLAATMQWMARDGSSMLGGLLFTAFASSSFGIHIKRWRLFADLINDVALLLDMLAP--AYPE--LFLPIICLSSVFKAMCGVSAGACNAAIVQHWATRGNIADVGAKTGAQHTIVSVLALPLGFLFAQAAN----SSLQSLWASFVVLTSIHVWACYSMMRTLALRILTRSQLDRILPKLLF---------------------------------------------------DDNEKSKGTSSMTPACLAKTDKLLWLP-W--AEDPFCSF-ELVFGVSLSTILRSGIPLKKLISLFEGEKFMVA-QADDHPREAKKPKLV-ICVAEESTPRDYLRAYITAHVI 396
BLAST of mRNA_E-siliculosus-1a_F_contig1014.147.1 vs. uniprot
Match: A0A482SIE4_9ARCH (RUS1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIE4_9ARCH) HSP 1 Score: 238 bits (606), Expect = 2.120e-66 Identity = 127/235 (54.04%), Postives = 167/235 (71.06%), Query Frame = 1 Query: 808 NTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAID-NNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTEFL 1509
TFLP GYP +V EY Y+ W+++QDL S+LRG++AT AVL GMGVGRA T + AT+ W+ RDGAS+IGGLLFTS++S NF NIK WRLFAD+ N++G+ L+ML P FL L+C+ S KA CGVA GAT AAI+ HW N+ADI AKN AQHTV SL GL +S+ FA+ + G+ S +R+W Y++LT+VH+++NY AMR LALR+LN R +++ FL
Sbjct: 100 QTFLPLGYPKTVPAEYTAYQAWNVIQDLCSYLRGIMATNAVLAGMGVGRADITSIQATILWVLRDGASLIGGLLFTSLSSYNFVQNIKFWRLFADSINNVGITLDMLTPYFPLH----FLPLVCVGSTCKALCGVAAGATNAAISMHWGEKYGNVADILAKNNAQHTVVSLCGLAVSLPFAQ---MAGTISPARLWTIYSILTVVHMVSNYMAMRVLALRTLNRVRFHMILDTFL 327
BLAST of mRNA_E-siliculosus-1a_F_contig1014.147.1 vs. uniprot
Match: A0A813KE75_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KE75_POLGL) HSP 1 Score: 225 bits (573), Expect = 4.360e-62 Identity = 116/235 (49.36%), Postives = 162/235 (68.94%), Query Frame = 1 Query: 790 VRGGLMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLL 1494
++ L FLP GYP SV EY Y+ WD +Q + S+LRGVLATQA+L G+GVG+ G+T LAAT+ W+ +DG+ M+GGL F + S F VN+KTWRLFAD +N++GL L++LAP+ G FL +IC+A+VFKA CGV+ GAT AA+T H+A+ +N+AD+ AK G+Q T +L+GL WFA + S + VW + +LTL+H ANY +R+L L +L+P+R LL
Sbjct: 73 LKASLAGAFLPVGYPHSVSKEYFSYQAWDTVQAMCSYLRGVLATQALLRGVGVGKEGATALAATIIWVLKDGSGMVGGLGFATFCSVGFDVNVKTWRLFADVANNVGLTLDLLAPM----AGDYFLLVICVANVFKAMCGVSAGATKAALTAHFALRDNMADVQAKEGSQETAVTLMGLIAGSWFAMVAN----ESPATVWTAFVLLTLLHTFANYTGVRSLLLPTLSPSRLWLL 299
BLAST of mRNA_E-siliculosus-1a_F_contig1014.147.1 vs. uniprot
Match: W7U4R7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4R7_9STRA) HSP 1 Score: 223 bits (568), Expect = 8.180e-61 Identity = 168/500 (33.60%), Postives = 241/500 (48.20%), Query Frame = 1 Query: 799 GLMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTEFLG--QALGSTEGRSGTRGSEQDXXXXXXXXXXXXXXXXXGEERKGPALDWMGRIRDQGSPPESVAVLSPFAAARRERILV-LPGWFRALKPWGDFLQIHVGVPVRALVGEADDLLWLTSLYHDERSMVGVQVSYKPLGARMETTVNLALREDASPEDRLHAMFQANVIHHLVVRDPDGIPHGEDGVDRTL------------FLRKVTEEALRVTRKEFPAF---------------------RKALVREGWDLSRVTLGGGSW 2190
G+ TFLP GYP SVR EY+ Y+ WD +Q L S+LRG+L T+A+LEG GVG ++ L+A + W+ RDG M LLF+S+AS +F N+K WRLFAD SND+GL L+ML LP+ + G FL L C+++V K CGVA G T ++IT H+++ NIAD+ AK AQ T +L G+ + A+ ++ +A W + LT +H+LANY + L L SLN RA++L+ +FL Q + EG+ GT+ ++++G + D SP +L+P RERI L W A +P + +P A L +L ++ E ++ ++ P R V + R A+P+D L A FQA VI L + G E L K+ ++ T FP F R A EGWDL R+ LG W
Sbjct: 58 GISATFLPVGYPYSVREEYLTYQIWDTVQALCSYLRGILTTKAILEGSGVGSEAASALSAAMNWVFRDGVGMACSLLFSSMASISFDCNVKEWRLFADISNDVGLTLDMLTGLPSLK--GHFLLLTCLSTVCKTMCGVAAGCTKSSITAHFSLRGNIADVSAKENAQETAVTLFGIVGGLLCAQWIACPETA-----WPVFLSLTALHVLANYKGVVALKLYSLNTQRAAILIDDFLNRDQGMDRAEGQ-GTQ-----------------------DKKRGDSTTIGSSTTD--SPHPLPRLLTPTQVMARERIYQPLWSWLLAQQPCLGSRISDLSLPSPA------HLSFLMRVFSHESYLL----TFAPFSGR----VTVIFRAGATPQDELKAFFQAQVIKRLDLDRRVGNGGREASXXXXXXXXXXXXKWPSPLLGKLVLKSYETTVHRFPIFWAALQSENGKNEIGGEEPRSDRSAAGEEGWDLGRMNLGTRGW 510
BLAST of mRNA_E-siliculosus-1a_F_contig1014.147.1 vs. uniprot
Match: L1IND8_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IND8_GUITC) HSP 1 Score: 215 bits (547), Expect = 5.420e-60 Identity = 107/170 (62.94%), Postives = 137/170 (80.59%), Query Frame = 1 Query: 811 TFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLL 1320
TFLP+GYP S+ EY +Y+ +++LQDLSS+LRG+L+TQ +LEGMGVG+AG T LAAT+QWMARDG+SM+GGLLFT+ AS++FG++IK WRLFAD ND+ L L+MLAP A+ + FL +IC++SVFKA CGVA GA AI +HWA NIAD+GAK GAQHT S+L
Sbjct: 129 TFLPSGYPASLPDEYTKYQAFNLLQDLSSNLRGILSTQKILEGMGVGKAGVTSLAATMQWMARDGSSMLGGLLFTAFASSSFGIDIKRWRLFADLINDVALLLDMLAP--AYPD--LFLPIICLSSVFKAMCGVAAGACNTAIVQHWAARGNIADVGAKTGAQHTFVSVL 294
BLAST of mRNA_E-siliculosus-1a_F_contig1014.147.1 vs. uniprot
Match: M4BWZ3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BWZ3_HYAAE) HSP 1 Score: 220 bits (560), Expect = 1.900e-59 Identity = 162/492 (32.93%), Postives = 236/492 (47.97%), Query Frame = 1 Query: 802 LMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPL-PAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTEFLGQALGSTEGRSGTRGSEQDXXXXXXXXXXXXXXXXXGEERKGPA---LDWMGRIRDQGSPPESVAV-LSPFAAARRERILVL----PGWFRALKPWGDFLQIHVGVPVRALVGE-ADDLLWLTSLYHDERSMVGVQVSY-------------------KPLGARMETTVNLALREDASPEDRLHAMFQANVIHHLVVRDPDGIPHGEDGVDRTLFLRKVTEEALRVTRKEFPAFRKALVREGWDLSRVTLGGGSW 2190
+ FLPAGYP SV +YV ++ WD +Q + S+LRGVLATQ+VL+ +GVG +TPLAA LQW+ RDG+ MIGGL F + F +N+K WRLFAD ND+GL L+M+APL P ++C++S+FK CGVA GAT +++ H+A +N+AD AK G+Q T L GL + ++FA AV+ S VW + VLTLVH+ ANY A+ L + ++N R S+LV FL +SGT + D +E L ++G + S+ V LSP + I + P + P L + + AL + D LL + + D ++ + V + K L +E V++ + DA+P D L A FQA ++ + P P G L+L + T + +FP F + L W L W
Sbjct: 72 IQEMFLPAGYPNSVSEDYVSFQLWDTIQAMCSYLRGVLATQSVLQSVGVGNDTATPLAAALQWVLRDGSGMIGGLTFAYLVGPKFDLNVKRWRLFADVVNDVGLTLDMIAPLVPTL-----VTEVLCLSSIFKTMCGVAVGATRSSLMTHFAKRDNMADCAAKEGSQETAVKLCGLIVGMYFANAVN----ESQFAVWVAFLVLTLVHVYANYNAVSCLCIPTVNILRGSILVQRFL---------KSGTCSNSMDNAADQVRTRALLDHDVATDEMNTICCCLLSFVGYCAAAANIFTSLCVRLSPVLYHTKYSIRSVNQKEPVFSNPSLPVTSQLTMGSQLHEAALTSQDLDKLLQIYAYDDDTKACISCNVFFPQLLIFLVAFCMLHVCREEKFLLTVVENHVHVMFQADANPNDELRAFFQAILVLQALTLAPSSPPSSRGGKKGHLYLLESTHHQMMT---DFPLFLQVLENHSWRTHMYLLNTTPW 542
BLAST of mRNA_E-siliculosus-1a_F_contig1014.147.1 vs. uniprot
Match: W4FX85_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FX85_9STRA) HSP 1 Score: 208 bits (529), Expect = 9.230e-58 Identity = 114/236 (48.31%), Postives = 154/236 (65.25%), Query Frame = 1 Query: 802 LMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPL-PAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTEF 1506
L + FLP GYP SV EY+ ++ WD Q + S+LRGVLATQ+VLE +GVG+ TPLAA LQW+ RDG+ M+GGL F V F N+K WRL+AD ND GL L+MLAP P + ++CI+SV KA CGVA GAT +++T H+A +N+ADI AK G+Q T +++GL ++FA AV+ S S VW + VLTL H++ANY A+ L + +LN RA L + +
Sbjct: 71 LFDMFLPFGYPDSVSHEYLTFQLWDTCQAMCSYLRGVLATQSVLESVGVGKDSVTPLAAALQWVMRDGSGMLGGLFFAYVVGPKFDANVKFWRLYADVINDFGLTLDMLAPFFPLY-----VTEILCISSVCKAMCGVAAGATRSSLTAHFAKHDNMADIAAKEGSQETFVNMVGLVCGMYFANAVN----QSRSTVWLAFLVLTLFHVIANYKAVSALCIPTLNVQRAFLAIRRY 297
BLAST of mRNA_E-siliculosus-1a_F_contig1014.147.1 vs. uniprot
Match: A0A067CAR1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAR1_SAPPC) HSP 1 Score: 212 bits (539), Expect = 1.530e-57 Identity = 114/243 (46.91%), Postives = 161/243 (66.26%), Query Frame = 1 Query: 787 AVRGGLMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFL-RLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTEFLG 1512
A+R L + FLPAGYP SV +Y+ ++ WD Q + S+LRGVLATQ+VLE +GVG TPLAA LQW+ RDG+ M+GGL F F N+K WRL+AD ND+GL L+MLAP R++ +++C++SV KA CGVA GAT +++T H+A +N+ADI AK G+Q T +LLGL ++FA V+ S + VW + +LT +H++ANY A+ +L + +LN RA+L + F G
Sbjct: 68 AIRSELFDMFLPAGYPSSVTEDYLPFQLWDTCQAMCSYLRGVLATQSVLESVGVGNEAITPLAAALQWVMRDGSGMLGGLFFAYGVGPKFDANVKFWRLYADVINDVGLTLDMLAPFAP-----RYVTQILCVSSVCKAMCGVAAGATRSSLTAHFAKADNMADIAAKEGSQETFVTLLGLLTGMYFANLVN----QSRASVWVAFLLLTAIHVVANYKAVTSLCIPTLNQARATLAIRSFRG 301 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1014.147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1014.147.1 >prot_E-siliculosus-1a_F_contig1014.147.1 ID=prot_E-siliculosus-1a_F_contig1014.147.1|Name=mRNA_E-siliculosus-1a_F_contig1014.147.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=739bp MLVSMTQPVYNWLGTGVLAFSSPRRTLAEGQSGTSCSTTCSSMLRSCNLSback to top mRNA from alignment at E-siliculosus-1a_F_contig1014:3753..13342- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1014.147.1 ID=mRNA_E-siliculosus-1a_F_contig1014.147.1|Name=mRNA_E-siliculosus-1a_F_contig1014.147.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9590bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1014:3753..13342- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1014:3753..13342- >mRNA_E-siliculosus-1a_F_contig1014.147.1 ID=mRNA_E-siliculosus-1a_F_contig1014.147.1|Name=mRNA_E-siliculosus-1a_F_contig1014.147.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4434bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1014:3753..13342- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |