mRNA_E-siliculosus-1a_F_contig10134.143.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig10134.143.1
Unique NamemRNA_E-siliculosus-1a_F_contig10134.143.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10134.143.1 vs. uniprot
Match: E6ZEQ8_ECTSI (Sec-independent transporter protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZEQ8_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 2.780e-157
Identity = 222/254 (87.40%), Postives = 241/254 (94.88%), Query Frame = 1 
Query:    1 MKRLKLSIYYIQELNYRLAYATLGTTLIFFTTYIYKQGLIFLLLPRGLSHFVSSGLTEIFFTYIQLCIILSLSFGIFLVVSQSYIFLRPGMYTYESNTFLRLLISAFCFYVCIYVLIFPTLIKIIWELFLTYSQNFTPINLTFEPRLNNYLDHVQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIVAFFIAAFITPPDIISQIFVGAPLIFFFEAQIVTWTFYKKYQQQFLVRQPIKPHKNTLRNKK 762
            MKRL+LSIYYIQELNYRLAYA LGTTLIFFTTY YKQGLIFLLLP+GLSHFVS+GLTEIFFTYIQLCIILS+SFGIFL+ SQSY+FLRPGMYTYES+TFL+L+ISAFCFY  IY+L+FP LIK+ WELFLTYSQNFTPINLTFEPRLNNYLDH+QQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYI+AFFIAAFITPPDIISQI VGAPLIFFFE QI+ W FYK+Y++Q LVRQPIK HKNTLRNK+
Sbjct:    1 MKRLQLSIYYIQELNYRLAYAALGTTLIFFTTYTYKQGLIFLLLPKGLSHFVSAGLTEIFFTYIQLCIILSISFGIFLIASQSYVFLRPGMYTYESSTFLKLIISAFCFYTYIYILVFPALIKVSWELFLTYSQNFTPINLTFEPRLNNYLDHIQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIIAFFIAAFITPPDIISQILVGAPLIFFFEIQIILWAFYKEYKKQLLVRQPIKSHKNTLRNKE 254
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10134.143.1 vs. uniprot
Match: A0A8F0JZS6_9PHAE (SecY-independent transporter protein n=1 Tax=Cymathaere triplicata TaxID=309354 RepID=A0A8F0JZS6_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 7.060e-116
Identity = 163/254 (64.17%), Postives = 206/254 (81.10%), Query Frame = 1 
Query:    1 MKRLKLSIYYIQELNYRLAYATLGTTLIFFTTYIYKQGLIFLLLPRGLSHFVSSGLTEIFFTYIQLCIILSLSFGIFLVVSQSYIFLRPGMYTYESNTFLRLLISAFCFYVCIYVLIFPTLIKIIWELFLTYSQNFTPINLTFEPRLNNYLDHVQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIVAFFIAAFITPPDIISQIFVGAPLIFFFEAQIVTWTFYKKYQQQFLVRQPIKPHKNTLRNKK 762
            M RLK SIYY+QELNYRLAYA LGT  +F TTY YKQGLIF+ LP+GLSHFVS+GLTEIFFTY+QLC I S SFG+ + ++Q Y+FLRPG+Y +E+ T   LL +A  FY+CIY ++FP ++KI+WELF  YSQNFT I+LTFEPRL +YL H+QQLN  L  SFPCL+ LN+ Q YTN++ W+K+RGIAYI AFFIAAFITPPD++SQ  +G PLI F+E QI  W+ Y++Y++Q LVRQPIKP++N+ R+KK
Sbjct:    1 MNRLKTSIYYLQELNYRLAYAILGTVFLFSTTYTYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQLCTIFSFSFGLGIALTQLYLFLRPGLYAFEAKTTFHLLTTALIFYICIYTIVFPIIVKILWELFSAYSQNFTAIDLTFEPRLQDYLSHLQQLNTALTLSFPCLILLNIIQMYTNRETWIKYRGIAYITAFFIAAFITPPDVLSQTLIGLPLIIFYEIQIKFWSLYEEYKKQLLVRQPIKPYENSYRDKK 254
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10134.143.1 vs. uniprot
Match: W5RG32_COSCS (SecY-independent transporter protein n=19 Tax=Laminariales TaxID=2886 RepID=W5RG32_COSCS)

HSP 1 Score: 339 bits (870), Expect = 6.180e-115
Identity = 163/256 (63.67%), Postives = 208/256 (81.25%), Query Frame = 1 
Query:    1 MKRLKLSIYYIQELNYRLAYATLGTTLIFFTTYIYKQGLIFLLLPRGLSHFVSSGLTEIFFTYIQLCIILSLSFGIFLVVSQSYIFLRPGMYTYESNTFLRLLISAFCFYVCIYVLIFPTLIKIIWELFLTYSQNFTPINLTFEPRLNNYLDHVQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIVAFFIAAFITPPDIISQIFVGAPLIFFFEAQIVTWTFYKKYQQQFLVRQPIKPHKNTLRNKK*S 768
            M RL+ SIYY+QEL YRLAYA  GT  +F T Y YKQGLIF+ LP+GLSHFVS+GLTEIFFTY+Q+C I S SFG+ + ++Q Y+FLRPG+Y +E+NT   LLI+AF FY C+Y+ IFP ++K++WELFLTYSQNFT I+LTFEPRL++YL H+QQLNK L FSFPCL+ LN  Q YT+KQ WVK+RGIAYI+AF +AAFITPPD++SQ  +G PLI  +E Q+  W+ Y++Y++Q L+RQPIKPHK + RNK+ S
Sbjct:    1 MNRLQTSIYYLQELKYRLAYAIFGTIFLFSTAYTYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQICTIFSFSFGLGITLTQLYLFLRPGLYAFEANTIFNLLITAFLFYTCLYIFIFPIIVKMLWELFLTYSQNFTAIDLTFEPRLHDYLTHLQQLNKALTFSFPCLIALNTVQIYTSKQTWVKYRGIAYIIAFSLAAFITPPDVLSQTLLGVPLIVCYEVQLKFWSLYEEYKKQLLIRQPIKPHKYSNRNKEKS 256
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10134.143.1 vs. uniprot
Match: A0A516ICK0_9PHAE (SecY-independent transporter protein n=3 Tax=Lessonia TaxID=105411 RepID=A0A516ICK0_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 2.340e-114
Identity = 164/254 (64.57%), Postives = 205/254 (80.71%), Query Frame = 1 
Query:    1 MKRLKLSIYYIQELNYRLAYATLGTTLIFFTTYIYKQGLIFLLLPRGLSHFVSSGLTEIFFTYIQLCIILSLSFGIFLVVSQSYIFLRPGMYTYESNTFLRLLISAFCFYVCIYVLIFPTLIKIIWELFLTYSQNFTPINLTFEPRLNNYLDHVQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIVAFFIAAFITPPDIISQIFVGAPLIFFFEAQIVTWTFYKKYQQQFLVRQPIKPHKNTLRNKK 762
            M +L++SIYY+QE NYRL Y   GT  IF TTY YKQ LIF+ LP+GLSHFVS+GLTEIFFTY+Q+C I SLS GI + + Q Y+FLRPG+Y +E+ T   LLI+A  FYVC+YV+IFP +IKI+WELF TYSQNFT ++LTFEP+L +YL H+QQLNK L FSFPCL+ LN+ Q YTNKQ WVK+RGIAYI AFFIAAFITPPDI+SQ  +G PLI ++E Q+  W+ Y++Y++Q L+RQPIK HKN+ R+KK
Sbjct:    1 MNKLQISIYYLQEFNYRLIYTIFGTMFIFITTYTYKQSLIFIFLPQGLSHFVSTGLTEIFFTYLQVCTIFSLSCGIGIAIIQLYLFLRPGLYAFEAKTIFHLLITALIFYVCLYVIIFPIIIKILWELFSTYSQNFTALDLTFEPKLQDYLYHLQQLNKALSFSFPCLIVLNMLQFYTNKQTWVKYRGIAYITAFFIAAFITPPDILSQTLLGLPLILYYELQLKFWSLYEEYKKQLLIRQPIKSHKNSYRDKK 254
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10134.143.1 vs. uniprot
Match: A0A0U1XGV1_9PHAE (SecY-independent protein translocase component tatC n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XGV1_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 1.020e-113
Identity = 164/244 (67.21%), Postives = 201/244 (82.38%), Query Frame = 1 
Query:    1 MKRLKLSIYYIQELNYRLAYATLGTTLIFFTTYIYKQGLIFLLLPRGLSHFVSSGLTEIFFTYIQLCIILSLSFGIFLVVSQSYIFLRPGMYTYESNTFLRLLISAFCFYVCIYVLIFPTLIKIIWELFLTYSQNFTPINLTFEPRLNNYLDHVQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIVAFFIAAFITPPDIISQIFVGAPLIFFFEAQIVTWTFYKKYQQQFLVRQPIK 732
            MK++++ IYY+QELNYRLAY+ +GT L+F TTYIYKQ LIFL+LP+GLSHF+S+GLTEIFFTY+QLC I+S SFGI L V Q Y+FLRPG++ YES   L LLI    FY  +Y+++FP L+K +WELF TYS NFTPI+LTFEPRLN+YL+H+Q LNKIL FSFPCL+TLNL QKYT K LWVK+RGIAYI+ F IAA +TPPDI+SQ  V  PLIFFFE QI+ W  Y++YQ+Q L+RQPIK
Sbjct:    1 MKKIRIFIYYLQELNYRLAYSVIGTLLLFSTTYIYKQSLIFLILPQGLSHFISAGLTEIFFTYMQLCTIISFSFGIILTVLQIYLFLRPGLFFYESKITLNLLIGIILFYTYLYLILFPLLVKFLWELFTTYSNNFTPIHLTFEPRLNDYLEHIQHLNKILSFSFPCLITLNLIQKYTKKILWVKYRGIAYIIVFSIAACLTPPDILSQTIVALPLIFFFELQIIFWALYQEYQKQLLIRQPIK 244
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10134.143.1 vs. uniprot
Match: S4S3T7_LAMHY (SecY-independent transporter protein n=8 Tax=Laminariaceae TaxID=33636 RepID=S4S3T7_LAMHY)

HSP 1 Score: 334 bits (856), Expect = 7.760e-113
Identity = 159/254 (62.60%), Postives = 203/254 (79.92%), Query Frame = 1 
Query:    1 MKRLKLSIYYIQELNYRLAYATLGTTLIFFTTYIYKQGLIFLLLPRGLSHFVSSGLTEIFFTYIQLCIILSLSFGIFLVVSQSYIFLRPGMYTYESNTFLRLLISAFCFYVCIYVLIFPTLIKIIWELFLTYSQNFTPINLTFEPRLNNYLDHVQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIVAFFIAAFITPPDIISQIFVGAPLIFFFEAQIVTWTFYKKYQQQFLVRQPIKPHKNTLRNKK 762
            M RL+ SIYY+QEL YRLAYA  GT  +F TTY YKQGLIF+ LP+GLSHFVS+GLTEIFFTY+Q+C I S SFG+ + ++Q Y+FLRPG+Y +E+NT   LLI+AF FY C+Y+ +FP ++K++WELF  YSQNFT I+LTFEPRL +YL H+QQLNK L  SFPC++TLN+ Q YT KQ WVK+RGIAYI AF IAAFITPPD++SQ  +G PLI F+E Q+  W  Y++Y++Q L+RQPIK H+N+  +KK
Sbjct:    1 MNRLQTSIYYLQELKYRLAYAIFGTIFLFSTTYTYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQICTIFSFSFGLGITLTQLYLFLRPGLYAFEANTIFNLLITAFLFYTCLYIFVFPIIVKVLWELFSAYSQNFTAIDLTFEPRLKDYLYHLQQLNKTLTLSFPCIITLNIIQIYTKKQTWVKYRGIAYIAAFSIAAFITPPDVLSQTLIGLPLIVFYEIQLKLWFLYEEYKKQLLIRQPIKSHENSYGDKK 254
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10134.143.1 vs. uniprot
Match: A0A089N2X8_PETFA (SecY-independent protein translocase component tatC n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089N2X8_PETFA)

HSP 1 Score: 333 bits (853), Expect = 2.220e-112
Identity = 159/254 (62.60%), Postives = 205/254 (80.71%), Query Frame = 1 
Query:    1 MKRLKLSIYYIQELNYRLAYATLGTTLIFFTTYIYKQGLIFLLLPRGLSHFVSSGLTEIFFTYIQLCIILSLSFGIFLVVSQSYIFLRPGMYTYESNTFLRLLISAFCFYVCIYVLIFPTLIKIIWELFLTYSQNFTPINLTFEPRLNNYLDHVQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIVAFFIAAFITPPDIISQIFVGAPLIFFFEAQIVTWTFYKKYQQQFLVRQPIKPHKNTLRNKK 762
            MK+L LSI+Y+QEL YRL YA  GT L+FF TY YKQ LI+++LP+GLSHF+++GLTEIFFTY+QLC I+S+SFG+   + Q Y+FLRPG+Y++ES   L +LI    FY  +Y  IFP LIK +WELFLTYSQNF PI+LTFEPRLN+YL+HVQ LN++L  S P ++TLNL Q+YT K+LWVK+RGIAYI AF +AAFITPPDI+SQ+F+G P+I F+E QI+ W  YK+YQ+Q L+ QP+K +KN LRNK+
Sbjct:    1 MKKLHLSIFYLQELKYRLLYAAAGTILLFFITYQYKQALIYIILPQGLSHFITAGLTEIFFTYMQLCSIISISFGLITAILQIYLFLRPGLYSFESKIVLNILICTLLFYTYLYTTIFPLLIKFLWELFLTYSQNFAPIHLTFEPRLNDYLEHVQHLNEVLCLSLPSIITLNLLQRYTKKKLWVKYRGIAYIAAFSLAAFITPPDILSQVFIGFPIILFYELQIIFWALYKQYQEQLLIWQPVKTYKNPLRNKE 254
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10134.143.1 vs. uniprot
Match: A0A8F0FDV4_9PHAE (SecY-independent transporter protein n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0FDV4_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 4.460e-112
Identity = 163/254 (64.17%), Postives = 203/254 (79.92%), Query Frame = 1 
Query:    1 MKRLKLSIYYIQELNYRLAYATLGTTLIFFTTYIYKQGLIFLLLPRGLSHFVSSGLTEIFFTYIQLCIILSLSFGIFLVVSQSYIFLRPGMYTYESNTFLRLLISAFCFYVCIYVLIFPTLIKIIWELFLTYSQNFTPINLTFEPRLNNYLDHVQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIVAFFIAAFITPPDIISQIFVGAPLIFFFEAQIVTWTFYKKYQQQFLVRQPIKPHKNTLRNKK 762
            M RL++SIYY+QELNYRLAYA LGT  +F TTY YKQ LIF++LP+GLSHFVS+G+TEIFFTYIQL  I S SF I + ++Q Y+FLRPG YT+E+     LLI+A  FY+C+Y++IFP ++KI+WELF TYSQNFT I+LTFEP+L NYL H+QQLNK L  SFPCL+ LN+ Q YTNKQ WVK+RGIAYI AF IAAFITPPDI+SQ  +G PLI F+E Q+  W+ Y++Y++Q L+RQPIK H+   R KK
Sbjct:    1 MNRLQISIYYLQELNYRLAYAILGTLFLFITTYTYKQSLIFIILPKGLSHFVSTGITEIFFTYIQLSTIFSFSFSICITLTQLYLFLRPGFYTFEAKITFNLLITALIFYICLYIVIFPIIVKILWELFSTYSQNFTAIDLTFEPKLENYLSHLQQLNKALTLSFPCLVILNILQIYTNKQTWVKYRGIAYITAFSIAAFITPPDILSQTLIGFPLIIFYELQLKFWSLYEEYKKQLLIRQPIKSHEYPNRYKK 254
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10134.143.1 vs. uniprot
Match: A0A8F0K0V4_9PHAE (SecY-independent transporter protein n=2 Tax=Agaraceae TaxID=2012474 RepID=A0A8F0K0V4_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 1.810e-111
Identity = 159/254 (62.60%), Postives = 203/254 (79.92%), Query Frame = 1 
Query:    1 MKRLKLSIYYIQELNYRLAYATLGTTLIFFTTYIYKQGLIFLLLPRGLSHFVSSGLTEIFFTYIQLCIILSLSFGIFLVVSQSYIFLRPGMYTYESNTFLRLLISAFCFYVCIYVLIFPTLIKIIWELFLTYSQNFTPINLTFEPRLNNYLDHVQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIVAFFIAAFITPPDIISQIFVGAPLIFFFEAQIVTWTFYKKYQQQFLVRQPIKPHKNTLRNKK 762
            M RL++SIYY+QELNYRL YA LGT  +FFTTY YKQGLIF+ LP+GLSHFVS+GLTEIFFTY+QLC I S SFG+ + ++Q Y+FLRPG+YT+E+     LLI+   FY C+Y+ IFP ++K++WELF  YSQNFT I+LTFEPRL++YL H++QLNK L  SFPCL+ L + Q YT++Q WVK+RGIAYIVAF IAAFITPPD++SQ  +G PLI F+E Q+  W  Y+ Y++Q L+RQPI+ HK + RNKK
Sbjct:    1 MNRLQISIYYLQELNYRLTYAILGTLFLFFTTYTYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQLCTIFSFSFGLGITLTQLYLFLRPGLYTFEARITFNLLITTIIFYSCLYIFIFPIIVKVLWELFSAYSQNFTAIDLTFEPRLHDYLSHLRQLNKALTLSFPCLIALQIVQIYTSRQTWVKYRGIAYIVAFSIAAFITPPDVLSQTLIGLPLIIFYEIQLKFWALYEGYKKQLLIRQPIESHKYSDRNKK 254
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10134.143.1 vs. uniprot
Match: A0A8F0K1B9_9PHAE (SecY-independent transporter protein n=7 Tax=Alariaceae TaxID=2887 RepID=A0A8F0K1B9_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 3.650e-111
Identity = 160/254 (62.99%), Postives = 201/254 (79.13%), Query Frame = 1 
Query:    1 MKRLKLSIYYIQELNYRLAYATLGTTLIFFTTYIYKQGLIFLLLPRGLSHFVSSGLTEIFFTYIQLCIILSLSFGIFLVVSQSYIFLRPGMYTYESNTFLRLLISAFCFYVCIYVLIFPTLIKIIWELFLTYSQNFTPINLTFEPRLNNYLDHVQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIVAFFIAAFITPPDIISQIFVGAPLIFFFEAQIVTWTFYKKYQQQFLVRQPIKPHKNTLRNKK 762
            M  LK+SIYY+QELNYRLAYA  GT  +F TTY YKQGLIF+ LP+GLSHFVS+GLTEIFFTY+Q C I S      + ++Q Y+FLRPG+Y +ES T L LLI+A  FY+C+YV +FP + KI+WELF  YSQNFT I+LTFEPRL++YL H+QQLNK+L  SFPCL+ LN+ Q YTN+ +WVK+RGIAYI AFFIAAFITPPD++SQ  +G PLI F+E Q+  W+ Y+ Y++Q L+RQPIK HK + R+KK
Sbjct:    1 MNSLKISIYYLQELNYRLAYAIFGTFFLFSTTYTYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQFCTIFSFXXXXXIALTQLYLFLRPGLYAFESKTILNLLIAAIVFYICLYVFLFPIITKILWELFSDYSQNFTAIDLTFEPRLHDYLLHLQQLNKVLTLSFPCLIALNIVQIYTNRHIWVKYRGIAYITAFFIAAFITPPDVLSQTLIGLPLIIFYEIQLKIWSLYEGYKKQLLLRQPIKSHKYSYRDKK 254
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10134.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E6ZEQ8_ECTSI2.780e-15787.40Sec-independent transporter protein n=2 Tax=Ectoca... [more]
A0A8F0JZS6_9PHAE7.060e-11664.17SecY-independent transporter protein n=1 Tax=Cymat... [more]
W5RG32_COSCS6.180e-11563.67SecY-independent transporter protein n=19 Tax=Lami... [more]
A0A516ICK0_9PHAE2.340e-11464.57SecY-independent transporter protein n=3 Tax=Lesso... [more]
A0A0U1XGV1_9PHAE1.020e-11367.21SecY-independent protein translocase component tat... [more]
S4S3T7_LAMHY7.760e-11362.60SecY-independent transporter protein n=8 Tax=Lamin... [more]
A0A089N2X8_PETFA2.220e-11262.60SecY-independent protein translocase component tat... [more]
A0A8F0FDV4_9PHAE4.460e-11264.17SecY-independent transporter protein n=2 Tax=Ecklo... [more]
A0A8F0K0V4_9PHAE1.810e-11162.60SecY-independent transporter protein n=2 Tax=Agara... [more]
A0A8F0K1B9_9PHAE3.650e-11162.99SecY-independent transporter protein n=7 Tax=Alari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10134contigE-siliculosus-1a_F_contig10134:1860..2677 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size765
Model size818
Exons1
Hectar predicted targeting categorysignal anchor
BRITEko00000,ko00001,ko00002,ko02044
Best eggNOG OGNA|NA|NA
Best tax levelRickettsiales
COG Functional cat.U
EggNOG OGs1MVAY@1224,2TTIX@28211,47FAE@766,COG0805@1,COG0805@2
EggNOG free text desc.Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides
GOsGO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680
KEGG ModuleM00336
KEGG Pathwayko03060,ko03070,map03060,map03070
KEGG TC2.A.64
KEGG koko:K03118
Preferred nametatC
Seed eggNOG ortholog1528098.NOVO_01510
Seed ortholog evalue3.9e-14
Seed ortholog score85.5
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927515.9291303-CDS-E-siliculosus-1a_F_contig10134:1859..26241622927515.9291303-CDS-E-siliculosus-1a_F_contig10134:1859..2624Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10134 1860..2624 +
1696318563.293649-CDS-E-siliculosus-1a_F_contig10134:1859..26241696318563.293649-CDS-E-siliculosus-1a_F_contig10134:1859..2624Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10134 1860..2624 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927515.9439998-UTR-E-siliculosus-1a_F_contig10134:2624..26771622927515.9439998-UTR-E-siliculosus-1a_F_contig10134:2624..2677Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig10134 2625..2677 +
1696318563.3037312-UTR-E-siliculosus-1a_F_contig10134:2624..26771696318563.3037312-UTR-E-siliculosus-1a_F_contig10134:2624..2677Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig10134 2625..2677 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10134.143.1prot_E-siliculosus-1a_F_contig10134.143.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig10134 1860..2624 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig10134.143.1

>prot_E-siliculosus-1a_F_contig10134.143.1 ID=prot_E-siliculosus-1a_F_contig10134.143.1|Name=mRNA_E-siliculosus-1a_F_contig10134.143.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=255bp
MKRLKLSIYYIQELNYRLAYATLGTTLIFFTTYIYKQGLIFLLLPRGLSH
FVSSGLTEIFFTYIQLCIILSLSFGIFLVVSQSYIFLRPGMYTYESNTFL
RLLISAFCFYVCIYVLIFPTLIKIIWELFLTYSQNFTPINLTFEPRLNNY
LDHVQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIVAFFIAAF
ITPPDIISQIFVGAPLIFFFEAQIVTWTFYKKYQQQFLVRQPIKPHKNTL
RNKK*
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mRNA from alignment at E-siliculosus-1a_F_contig10134:1860..2677+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10134.143.1 ID=mRNA_E-siliculosus-1a_F_contig10134.143.1|Name=mRNA_E-siliculosus-1a_F_contig10134.143.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=818bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10134:1860..2677+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAAAGACTTAAATTATCCATATATTATATCCAAGAACTTAATTACCG
TTTAGCTTATGCAACTTTAGGCACAACATTAATTTTTTTTACAACATACA
TATATAAACAAGGCTTAATTTTTTTATTATTGCCCCGAGGTTTATCTCAT
TTTGTAAGCTCAGGGCTTACTGAAATCTTTTTTACTTATATACAACTTTG
TATTATTTTAAGCCTAAGCTTTGGTATTTTTTTAGTTGTCTCGCAGAGTT
ATATTTTTTTACGTCCTGGTATGTACACATATGAATCAAACACTTTTTTA
AGACTTCTTATAAGTGCTTTTTGCTTTTACGTATGTATATATGTATTAAT
TTTCCCTACGCTTATTAAAATAATATGGGAACTTTTTTTAACCTACTCAC
AAAATTTCACCCCAATAAATTTAACATTTGAACCTAGATTAAACAATTAT
TTAGACCATGTACAACAATTAAATAAGATATTAATTTTTAGTTTTCCTTG
TTTACTTACCCTAAACTTGTTTCAAAAATATACTAATAAACAATTGTGGG
TAAAACATAGAGGTATAGCTTATATAGTAGCTTTTTTTATTGCTGCTTTT
ATAACCCCTCCTGATATAATAAGCCAAATATTTGTAGGGGCTCCTCTAAT
TTTTTTTTTTGAAGCTCAAATAGTAACGTGGACCTTTTATAAAAAATATC
AGCAACAATTTTTAGTTAGGCAACCAATCAAACCCCATAAGAATACCCTG
AGAAATAAAAAATAAAGCTAAAGCTAACGGCAAAAAACACTTCCAACCTA
ATTTCATTAATTGATCAT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10134:1860..2677+

>mRNA_E-siliculosus-1a_F_contig10134.143.1 ID=mRNA_E-siliculosus-1a_F_contig10134.143.1|Name=mRNA_E-siliculosus-1a_F_contig10134.143.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1530bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10134:1860..2677+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAAAGACTTAAATTATCCATATATTATATCCAAGAACTTAATTACCG
TTTAGCTTATGCAACTTTAGGCACAACATTAATTTTTTTTACAACATACA
TATATAAACAAGGCTTAATTTTTTTATTATTGCCCCGAGGTTTATCTCAT
TTTGTAAGCTCAGGGCTTACTGAAATCTTTTTTACTTATATACAACTTTG
TATTATTTTAAGCCTAAGCTTTGGTATTTTTTTAGTTGTCTCGCAGAGTT
ATATTTTTTTACGTCCTGGTATGTACACATATGAATCAAACACTTTTTTA
AGACTTCTTATAAGTGCTTTTTGCTTTTACGTATGTATATATGTATTAAT
TTTCCCTACGCTTATTAAAATAATATGGGAACTTTTTTTAACCTACTCAC
AAAATTTCACCCCAATAAATTTAACATTTGAACCTAGATTAAACAATTAT
TTAGACCATGTACAACAATTAAATAAGATATTAATTTTTAGTTTTCCTTG
TTTACTTACCCTAAACTTGTTTCAAAAATATACTAATAAACAATTGTGGG
TAAAACATAGAGGTATAGCTTATATAGTAGCTTTTTTTATTGCTGCTTTT
ATAACCCCTCCTGATATAATAAGCCAAATATTTGTAGGGGCTCCTCTAAT
TTTTTTTTTTGAAGCTCAAATAGTAACGTGGACCTTTTATAAAAAATATC
AGCAACAATTTTTAGTTAGGCAACCAATCAAACCCCATAAGAATACCCTG
AGAAATAAAAAATAAATGAAAAGACTTAAATTATCCATATATTATATCCA
AGAACTTAATTACCGTTTAGCTTATGCAACTTTAGGCACAACATTAATTT
TTTTTACAACATACATATATAAACAAGGCTTAATTTTTTTATTATTGCCC
CGAGGTTTATCTCATTTTGTAAGCTCAGGGCTTACTGAAATCTTTTTTAC
TTATATACAACTTTGTATTATTTTAAGCCTAAGCTTTGGTATTTTTTTAG
TTGTCTCGCAGAGTTATATTTTTTTACGTCCTGGTATGTACACATATGAA
TCAAACACTTTTTTAAGACTTCTTATAAGTGCTTTTTGCTTTTACGTATG
TATATATGTATTAATTTTCCCTACGCTTATTAAAATAATATGGGAACTTT
TTTTAACCTACTCACAAAATTTCACCCCAATAAATTTAACATTTGAACCT
AGATTAAACAATTATTTAGACCATGTACAACAATTAAATAAGATATTAAT
TTTTAGTTTTCCTTGTTTACTTACCCTAAACTTGTTTCAAAAATATACTA
ATAAACAATTGTGGGTAAAACATAGAGGTATAGCTTATATAGTAGCTTTT
TTTATTGCTGCTTTTATAACCCCTCCTGATATAATAAGCCAAATATTTGT
AGGGGCTCCTCTAATTTTTTTTTTTGAAGCTCAAATAGTAACGTGGACCT
TTTATAAAAAATATCAGCAACAATTTTTAGTTAGGCAACCAATCAAACCC
CATAAGAATACCCTGAGAAATAAAAAATAA
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