prot_E-siliculosus-1a_F_contig1011.127.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1011.127.1
Unique Nameprot_E-siliculosus-1a_F_contig1011.127.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length332
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1011.127.1 vs. uniprot
Match: D7FNM2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM2_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 1.720e-110
Identity = 228/269 (84.76%), Postives = 231/269 (85.87%), Query Frame = 0 
Query:    1 INWVSPEGDTPLLAACRNGHLQTALCLLSHGASANQVDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFESQGPHVPDGMLQRLDTIAQRSGRRTHHDPGISTAATNTSTFTTSSGRGAQDGGGLVSSRRSNTVLDSDTLSARATGGGVPENISGDGRPGWRWRSNTGRIEYNVPLTDDAHDGAADVGPAAISTGDGGRDDAQREERGGGEGRTTFPSISRKAGSTSADSRSSSRVHSAGRAASSSGDGVRSSDDEHDEL 269
            INWVSPEGDTPLL                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFESQGPHVPDGMLQRLDTIAQRSGRRTHH  GISTAA NTSTFTTSSGR AQDGGG +SSRRSNTVLDSDTLSARATGGGVPEN  GDGR GWRWRSNTGRIE++VPLTDDAHDGAA VGPAAISTGDGGRDDAQREERGG EGRTTFPSISRKAGSTSADSR SSRVHSAGRAASSSGDGVRSSDDEHDE 
Sbjct:   44 INWVSPEGDTPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFESQGPHVPDGMLQRLDTIAQRSGRRTHHHLGISTAAINTSTFTTSSGRSAQDGGGSMSSRRSNTVLDSDTLSARATGGGVPENNIGDGRSGWRWRSNTGRIEHHVPLTDDAHDGAAGVGPAAISTGDGGRDDAQREERGGVEGRTTFPSISRKAGSTSADSRPSSRVHSAGRAASSSGDGVRSSDDEHDEF 312
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1011.127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNM2_ECTSI1.720e-11084.76Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 56..70
score: 36.6
coord: 8..23
score: 37.98
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 7..36
e-value: 4.4E-4
score: 29.6
coord: 40..69
e-value: 1.1E-4
score: 31.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 40..72
score: 13.304
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 7..39
score: 11.594
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..82
e-value: 1.0E-23
score: 85.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..78
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 7..71
e-value: 1.3E-11
score: 45.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..78
score: 24.029
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 7..78
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 7..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1011contigE-siliculosus-1a_F_contig1011:25380..27462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1011.127.1mRNA_E-siliculosus-1a_F_contig1011.127.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1011 25380..27462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1011.127.1 ID=prot_E-siliculosus-1a_F_contig1011.127.1|Name=mRNA_E-siliculosus-1a_F_contig1011.127.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=332bp
INWVSPEGDTPLLAACRNGHLQTALCLLSHGASANQVDKDGRTALHVSCR
HGKEAVAEALILRGADVSARDHGGATAFESQGPHVPDGMLQRLDTIAQRS
GRRTHHDPGISTAATNTSTFTTSSGRGAQDGGGLVSSRRSNTVLDSDTLS
ARATGGGVPENISGDGRPGWRWRSNTGRIEYNVPLTDDAHDGAADVGPAA
ISTGDGGRDDAQREERGGGEGRTTFPSISRKAGSTSADSRSSSRVHSAGR
AASSSGDGVRSSDDEHDELLHEDETRRRFLSSAYRGPGVRQRGSLPIRNR
STGTGDEMSESMQLISAGEPVPHAVRTRQYDI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt