prot_E-siliculosus-1a_F_contig119.1210.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig119.1210.1
Unique Nameprot_E-siliculosus-1a_F_contig119.1210.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length117
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1210.1 vs. uniprot
Match: D7FYS9_ECTSI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS9_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 1.310e-72
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0
Query:    1 MATPVGTGPIVQDVAPKGGFPKIQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAWKEEEELN 116
            MATPVGTGPIVQDVAPKGGFPK+QISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAWKEEEELN
Sbjct:    1 MATPVGTGPIVQDVAPKGGFPKVQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAWKEEEELN 116          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1210.1 vs. uniprot
Match: A0A5J4XG14_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XG14_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 1.740e-16
Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKIQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAWKEEEEL 115
            P++QD  P GGFP ++ +R++PS  GP G  +  +    MA G+ K+GQ N  RRA + EK+ AR A+MP+LQAEEDR+ V A     + +K L +++  +K  E+L
Sbjct:   19 PVLQDGPPPGGFPSVRYARRIPS-TGPAGFTLFAVTASIMAYGFIKVGQTNHERRAAKAEKKAARFAIMPILQAEEDRRYVQANEAFIRKEKELMKNVPGYKAGEQL 124          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1210.1 vs. uniprot
Match: A0A061QUA6_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QUA6_9CHLO)

HSP 1 Score: 78.2 bits (191), Expect = 4.910e-16
Identity = 40/101 (39.60%), Postives = 67/101 (66.34%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKIQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAW 109
            P++QD  P GGFP I+I+R++P+  GP G+ + G+  + M+ G+Y +GQ N  RRA++ E+   R AL+P LQAEEDR+ + AK+   + +  + + ++ W
Sbjct:   19 PVLQDGPPPGGFPSIRIARRIPN-TGPSGAAIFGVGALVMSYGFYLVGQTNIQRRADKAEREHVRRALVPFLQAEEDRRYLKAKKQLLEKEASIMKDVDGW 118          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1210.1 vs. uniprot
Match: A0A087SFV8_AUXPR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFV8_AUXPR)

HSP 1 Score: 76.6 bits (187), Expect = 1.910e-15
Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKIQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAWKEEEEL 115
            PIVQD  P GGFP ++ +R+LP+  GP G  + G+    MA G+Y++GQ N  RR E+ EK  +R AL+P LQAEEDR+ V A     + QK + ++   +K EE +
Sbjct:   19 PIVQDGPPPGGFPAVRYARRLPNS-GPAGFTLFGVGAAVMAYGFYQVGQGNIKRRDEKREKLDSRRALVPFLQAEEDRRWVAANEEFQKKQKEIMKNHPEYKAEESV 124          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1210.1 vs. uniprot
Match: A0A2P6U3A2_CHLSO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3A2_CHLSO)

HSP 1 Score: 75.1 bits (183), Expect = 7.590e-15
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKIQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLA 91
            PIVQD  P GGFP I+ +R++PS  GP G  +  +    MA G+YK+GQ+N+ RR E+ E   AR AL+P LQAEEDR+ V A
Sbjct:   19 PIVQDGPPPGGFPAIRYARRVPS-TGPSGFTLFAVGAAVMAYGFYKVGQSNRQRRGEKAEHFGARAALVPFLQAEEDRRWVNA 100          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1210.1 vs. uniprot
Match: I0YQ01_COCSC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YQ01_COCSC)

HSP 1 Score: 74.3 bits (181), Expect = 1.510e-14
Identity = 40/101 (39.60%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKIQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAW 109
            P++QD  P GGFP I+ +R++PS  GP G  +  +    MA G+Y++G+ N+ RRA + EK   R A+ P+LQAEEDR+ V AK+ + + +  + + +  W
Sbjct:   19 PVLQDGPPPGGFPSIRYARRIPS-TGPTGFTLFAVGAAVMAFGFYRVGEFNRYRRALKAEKMTMRTAIYPVLQAEEDRRWVQAKKQSVENEAKIMKDVPGW 118          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1210.1 vs. uniprot
Match: A0A2P6VLY9_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLY9_9CHLO)

HSP 1 Score: 73.9 bits (180), Expect = 2.040e-14
Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKIQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGL 102
            P+VQD  P GGFP  + +R++PS  GP G  +       MA G+YK+GQ+N+ RRA++     AR AL+P LQAEEDR+ V A +     Q+G+
Sbjct:   19 PVVQDGPPPGGFPSFRYARRVPS-TGPSGITLFAAGAAVMAFGFYKVGQSNRERRAQKAANLAARAALVPFLQAEEDRRWVNANQTFLARQEGI 111          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1210.1 vs. uniprot
Match: A0A7S3CKE5_9SPIT (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CKE5_9SPIT)

HSP 1 Score: 73.9 bits (180), Expect = 2.240e-14
Identity = 38/84 (45.24%), Postives = 60/84 (71.43%), Query Frame = 0
Query:   10 IVQDVAPKGGFPKIQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKR 93
            ++QD  P GGFP ++I+R++P+  GP G+ V G+  + ++ G+Y +GQ N  +RA++ EK   R AL+P+LQAEEDR+ V AK+
Sbjct:   22 LLQDGPPAGGFPSVRIARRIPN-TGPSGAAVFGVGALVISYGFYIVGQTNIQKRADRAEKEAVRRALVPVLQAEEDRRFVAAKK 104          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1210.1 vs. uniprot
Match: A0A388KNK5_CHABU (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KNK5_CHABU)

HSP 1 Score: 70.5 bits (171), Expect = 4.850e-13
Identity = 38/102 (37.25%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKIQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAWK 110
            P++QD  P GGFP I+ +R++P+  GP G VV  +    ++ G Y++GQ N  RRA + EK  AR+A++P++QAEED +   A++     ++ + +++  WK
Sbjct:   19 PVLQDGPPPGGFPAIRYARKIPN-TGPSGVVVFSIAAAVISYGMYQVGQGNLHRRALKKEKMEARMAILPLIQAEEDVRYAKARQKALAEEEKIMQNVPGWK 119          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1210.1 vs. uniprot
Match: A0A0D2WN18_CAPO3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WN18_CAPO3)

HSP 1 Score: 68.6 bits (166), Expect = 1.970e-12
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKIQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAWKEEEEL 115
            P  QD+ P+GGF  +   R+  + RG  G+ +  + TVTM  G + +GQ NK RR  + E+ +AR  L+PMLQAEEDR+ VLAKR     +  L +++  WK  E++
Sbjct:    5 PYKQDMPPQGGFADVPF-RKPKAVRGLSGAALFAIGTVTMFGGLFIVGQGNKTRRYWREEQVIARRNLVPMLQAEEDRRFVLAKRAAEAKEAELMKNVRGWKMHEKI 110          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS9_ECTSI1.310e-7299.14NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A5J4XG14_9CHLO1.740e-1642.06NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A061QUA6_9CHLO4.910e-1639.60NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A087SFV8_AUXPR1.910e-1543.93NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2P6U3A2_CHLSO7.590e-1551.81NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
I0YQ01_COCSC1.510e-1439.60NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2P6VLY9_9CHLO2.040e-1444.68NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S3CKE5_9SPIT2.240e-1445.24NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A388KNK5_CHABU4.850e-1337.25NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A0D2WN18_CAPO31.970e-1241.12NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009346GRIM-19PFAMPF06212GRIM-19coord: 10..110
e-value: 2.5E-21
score: 76.0
IPR009346GRIM-19PANTHERPTHR12966NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 13coord: 9..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig119contigE-siliculosus-1a_F_contig119:14056..17840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig119.1210.1mRNA_E-siliculosus-1a_F_contig119.1210.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig119 12974..17930 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig119.1210.1 ID=prot_E-siliculosus-1a_F_contig119.1210.1|Name=mRNA_E-siliculosus-1a_F_contig119.1210.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=117bp
MATPVGTGPIVQDVAPKGGFPKIQISRQLPSGRGPRGSVVLGLVTVTMAV
GYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQK
GLHESLNAWKEEEELN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009346GRIM-19