prot_E-siliculosus-1a_F_contig1008.107.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1008.107.1
Unique Nameprot_E-siliculosus-1a_F_contig1008.107.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length765
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1008.107.1 vs. uniprot
Match: A0A6H5L2G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G9_9PHAE)

HSP 1 Score: 1281 bits (3316), Expect = 0.000e+0
Identity = 689/764 (90.18%), Postives = 700/764 (91.62%), Query Frame = 0
Query:    1 MVKLNNRRGHGGHHDVRKNVDAPEPGKRPPPATPPAGVRTPESAPHAAEKDGFTPDPALVSDGLSVLEAWEGVRDLGRLAVEALVRQAASLFRRKNGALPPAPRIAVLILLAVYIYDRXXXXXXXXXXXXXXXSPREPQRSSVARRDLRERGDGNRGPPSTAVAFDLAASLHSPSRSLFSRLRQAAGTPPLRAAGSPWTRRTYEVVPQPDGIDPSLPSPAQARAALARTGQARRSLMPGLTSRRGGGEGEVEGERSVPMAASSGRGVEGGTTSSARWGXXXXXGSWLGWXXXRVRGWTRCREPRSAGXXXXXXRRYMLWLLALWLVASVLEERERDRAAWLAWDEGYRRGQASRALDPAAEAETTAWLNHILAGAWGGTKRAVPRGFAGVNGIAGGRDVHGCVVTGMLAADGLSSFVAEHLTEGFLEVLEEMKPTSVVGVELLDVELGSSAPQILGITMLDPTSSASPGWGDGRCSHEGECLSFRVDLEVAAPDLRVGVRVKVSSLEKALLPTGTVRLLELFFRGSMSVRAELRPEFPFVKTALIAFDDPPDVQVKLEQWGLDTLSLGTVPAAVDEWARMALQQAISPYVMPGFIEVDAASAICPDXXXXXXXXKAEKQQQGKVGGVDIRLPSSRLPAATAATFAKGREAAAGGKVNLRNVPGKDRGNRRFGNKTGKKADERKPGNFSGQDSGRFPTAASAFEGDGLVGRGGRAAAMANLYEHRGGMGRVVQWLKDRLTNYVNASNERPTESEGRHVMDWQGMD 764
            MVKLNNRRG GGHHDVRKNV+APEPGKRPPPATPPAGVR  E APH AEKDGFTPDPALVSDGLSVLEAWEGVRDLGRLAVEALVRQAASLFRRKNGALPPAPRIA LILLA++IYDRXXXXXXXXXXXXXXX  REPQRSSVARRDL ERGDGNRGPPSTAVAFDL ASLHSPSRSLFSRLRQAAGTPPLRA GSPWTRRTYEVVPQPDGIDPSLP+P+QARAALARTGQARRSLMPGLT RRGGGEGEVE ERSVPMAASSGRGVE GTTSS  WG          W   RVRGWTRCREPR AG      RRYMLWL ALWLVASVLEERERDRAAWLAWDEGYRRGQASRALDPAAEAETTAWLNHILA AWGGTKR VPRGFAGVNGIAGGRDVHGCVVTGMLAADG+SSFVAEHLTEGF+EVLEEMKPTSVVGVELLDVELGSSAPQILGITMLDPTSSASPGWGDGRCSHEGECLSFRVDLEVAAPDLRVGVRVKVSSLEKALLPTGTVRLLELFFRGSMSVRAELRPEFPFVKT LIAFDDPPDVQVKLEQWGLD LSLGTVPAAVDEWARMALQQAISPYVMPGFIEVDAASAICPD        KAE QQ  K GGVDIRLPSSRLP ATAAT AKGRE A GGKV+ RN+PGKDRGNRRFGNKTGK ADERKPG FS QDSGRFPT ASAFEGDGLVGRGGRAAAMANLYEHRGGMGRVVQWLK+RLTN+V ASNE PTESEGRHVMDWQGMD
Sbjct:    1 MVKLNNRRGQGGHHDVRKNVNAPEPGKRPPPATPPAGVRKSEPAPHTAEKDGFTPDPALVSDGLSVLEAWEGVRDLGRLAVEALVRQAASLFRRKNGALPPAPRIAALILLAIFIYDRXXXXXXXXXXXXXXXX-REPQRSSVARRDLGERGDGNRGPPSTAVAFDLTASLHSPSRSLFSRLRQAAGTPPLRAPGSPWTRRTYEVVPQPDGIDPSLPTPSQARAALARTGQARRSLMPGLTRRRGGGEGEVERERSVPMAASSGRGVERGTTSSVGWG----------WWR-RVRGWTRCREPRRAGGGSGG-RRYMLWLFALWLVASVLEERERDRAAWLAWDEGYRRGQASRALDPAAEAETTAWLNHILASAWGGTKRVVPRGFAGVNGIAGGRDVHGCVVTGMLAADGMSSFVAEHLTEGFVEVLEEMKPTSVVGVELLDVELGSSAPQILGITMLDPTSSASPGWGDGRCSHEGECLSFRVDLEVAAPDLRVGVRVKVSSLEKALLPTGTVRLLELFFRGSMSVRAELRPEFPFVKTVLIAFDDPPDVQVKLEQWGLDALSLGTVPAAVDEWARMALQQAISPYVMPGFIEVDAASAICPDCPEVPTARKAETQQD-KAGGVDIRLPSSRLPGATAATLAKGRETADGGKVSGRNMPGKDRGNRRFGNKTGKNADERKPGKFSVQDSGRFPTVASAFEGDGLVGRGGRAAAMANLYEHRGGMGRVVQWLKERLTNFVVASNELPTESEGRHVMDWQGMD 750          
BLAST of mRNA_E-siliculosus-1a_F_contig1008.107.1 vs. uniprot
Match: D7FW85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW85_ECTSI)

HSP 1 Score: 1122 bits (2903), Expect = 0.000e+0
Identity = 616/768 (80.21%), Postives = 625/768 (81.38%), Query Frame = 0
Query:    1 MVKLNNRRGHGGHHDVRKNVDAPEPGKRPPPATPPAGVRTPESAPHAAEKDGFTPDPALVSDGLSVLEAWEGVRDLGRLAVEALVRQAASLFRRKNGALPPAPRIAVLILLAVYIYDRXXXXXXXXXXXXXXX----SPREPQRSSVARRDLRERGDGNRGPPSTAVAFDLAASLHSPSRSLFSRLRQAAGTPPLRAAGSPWTRRTYEVVPQPDGIDPSLPSPAQARAALARTGQARRSLMPGLTSRRGGGEGEVEGERSVPMAASSGRGVEGGTTSSARWGXXXXXGSWLGWXXXRVRGWTRCREPRSAGXXXXXXRRYMLWLLALWLVASVLEERERDRAAWLAWDEGYRRGQASRALDPAAEAETTAWLNHILAGAWGGTKRAVPRGFAGVNGIAGGRDVHGCVVTGMLAADGLSSFVAEHLTEGFLEVLEEMKPTSVVGVELLDVELGSSAPQILGITMLDPTSSASPGWGDGRCSHEGECLSFRVDLEVAAPDLRVGVRVKVSSLEKALLPTGTVRLLELFFRGSMSVRAELRPEFPFVKTALIAFDDPPDVQVKLEQWGLDTLSLGTVPAAVDEWARMALQQAISPYVMPGFIEVDAASAICPDXXXXXXXXKAEKQQQGKVGGVDIRLPSSRLPAATAATFAKGREAAAGGKVNLRNVPGKDRGNRRFGNKTGKKADERKPGNFSGQDSGRFPTAASAFEGDGLVGRGGRAAAMANLYEHRGGMGRVVQWLKDRLTNYVNASNERPTESEGRHVMDWQGMD 764
            MVKLNNRRG GGHHDVRKNVDAP PGKRPPPATPP GVRTPE APHAAEKDGFTPDPALVSDGLSVLEAWEGVRDLGRLAVEALVRQAA LFR KNGALPPAPRIA LILL V+IYDRXXXXXXXXXXXXXXX    SPREPQRSSVARRDLRERGDGNRGPPSTAVAFDLAASLHSPSRSLFSRLRQAAGTPPLRA GSPWTRRTYEVVPQPDG+DPSLPSPAQ                                                                                                              ERERDRAAWLAWDEGYRRGQASRALDPAAEAETTAWLNHILA AWGGTKR VP GFAGVNGIAGGRDVHGCVVTGMLAADGLSSFVAEHLTEGFLEVLEEMKPTSVVGVELLDVELGSSAPQILGITMLDPTSSASPGWGDGRC+HEGECLSFRVDLEVAAPDLRVGVRVKVSSLEKALLPTGTVRLLELFFRGSMSVRAELRPEFPFVKTALIAFDDPPDVQ+KLEQWGLD LSLGTVPAAVDEWARMALQQAISPYVMPGFIEVDAASAICPD        KAEKQQQGK GG+DIRLPSSRLPAATAATFAKGREAAAGGKV+ RNVPGKDRGNR FGNK GK ADERKPG FSGQDSGRFPTAASAFEGDGLVGRGGRAAAMANLYEHRGGMGRVVQWLKDRLTN+V +SNE PTE+EGRHVMDWQGMD
Sbjct:  167 MVKLNNRRGQGGHHDVRKNVDAPGPGKRPPPATPPVGVRTPEPAPHAAEKDGFTPDPALVSDGLSVLEAWEGVRDLGRLAVEALVRQAAGLFRLKNGALPPAPRIAALILLTVFIYDRXXXXXXXXXXXXXXXXXXXSPREPQRSSVARRDLRERGDGNRGPPSTAVAFDLAASLHSPSRSLFSRLRQAAGTPPLRAPGSPWTRRTYEVVPQPDGVDPSLPSPAQ--------------------------------------------------------------------------------------------------------------ERERDRAAWLAWDEGYRRGQASRALDPAAEAETTAWLNHILASAWGGTKRVVPTGFAGVNGIAGGRDVHGCVVTGMLAADGLSSFVAEHLTEGFLEVLEEMKPTSVVGVELLDVELGSSAPQILGITMLDPTSSASPGWGDGRCNHEGECLSFRVDLEVAAPDLRVGVRVKVSSLEKALLPTGTVRLLELFFRGSMSVRAELRPEFPFVKTALIAFDDPPDVQIKLEQWGLDALSLGTVPAAVDEWARMALQQAISPYVMPGFIEVDAASAICPDCPEVPAARKAEKQQQGKAGGIDIRLPSSRLPAATAATFAKGREAAAGGKVSGRNVPGKDRGNRGFGNKNGKNADERKPGKFSGQDSGRFPTAASAFEGDGLVGRGGRAAAMANLYEHRGGMGRVVQWLKDRLTNFVISSNEIPTETEGRHVMDWQGMD 824          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1008.107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2G9_9PHAE0.000e+090.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW85_ECTSI0.000e+080.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 117..764
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1008contigE-siliculosus-1a_F_contig1008:195..4484 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1008.107.1mRNA_E-siliculosus-1a_F_contig1008.107.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1008 141..5064 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1008.107.1 ID=prot_E-siliculosus-1a_F_contig1008.107.1|Name=mRNA_E-siliculosus-1a_F_contig1008.107.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=765bp
MVKLNNRRGHGGHHDVRKNVDAPEPGKRPPPATPPAGVRTPESAPHAAEK
DGFTPDPALVSDGLSVLEAWEGVRDLGRLAVEALVRQAASLFRRKNGALP
PAPRIAVLILLAVYIYDRRRRRGGRHQPPPPPPSPREPQRSSVARRDLRE
RGDGNRGPPSTAVAFDLAASLHSPSRSLFSRLRQAAGTPPLRAAGSPWTR
RTYEVVPQPDGIDPSLPSPAQARAALARTGQARRSLMPGLTSRRGGGEGE
VEGERSVPMAASSGRGVEGGTTSSARWGWGWRWGSWLGWWWWRVRGWTRC
REPRSAGGGGGGGRRYMLWLLALWLVASVLEERERDRAAWLAWDEGYRRG
QASRALDPAAEAETTAWLNHILAGAWGGTKRAVPRGFAGVNGIAGGRDVH
GCVVTGMLAADGLSSFVAEHLTEGFLEVLEEMKPTSVVGVELLDVELGSS
APQILGITMLDPTSSASPGWGDGRCSHEGECLSFRVDLEVAAPDLRVGVR
VKVSSLEKALLPTGTVRLLELFFRGSMSVRAELRPEFPFVKTALIAFDDP
PDVQVKLEQWGLDTLSLGTVPAAVDEWARMALQQAISPYVMPGFIEVDAA
SAICPDCPEVPAARKAEKQQQGKVGGVDIRLPSSRLPAATAATFAKGREA
AAGGKVNLRNVPGKDRGNRRFGNKTGKKADERKPGNFSGQDSGRFPTAAS
AFEGDGLVGRGGRAAAMANLYEHRGGMGRVVQWLKDRLTNYVNASNERPT
ESEGRHVMDWQGMD*
back to top