Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1006.99.1 vs. uniprot
Match:
A0A6H5L0F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0F7_9PHAE)
HSP 1 Score: 487 bits (1254), Expect = 9.040e-172
Identity = 259/312 (83.01%), Postives = 266/312 (85.26%), Query Frame = 0
Query: 8 MPPPQQQPGNECAPGFQCTPRLTFWIIAASSWVVWIFAVSAAADDKWIKDNGQGDWLAAGEDPVLTFCEDLDDADDDDVLDADEYKDFVSICDLYRAFTAMQMLATIVCSVSVLLLALAFFRPEAGKCASARTLAFVGGALMATYALFQLVAVVLAGVLAQEFDNLPNDDDTSYFSGYDGSYSFWDAGYEAEVGATFGVGVTALILAVIMTVALCLCARRTGDGPLYKCCHSLMLANKSNGIPRSGSEGGVGGGGGKGVPVVADLREGSHHTSVAAARPGATEQPSQQQHYEQAQPQRQPPPRYDTLPSAGV 319
MPPPQQQ GNECAPGFQCTPRLTFW+IAASSW+VWIFAVSAAADDKWIKDNGQGDWLAAGEDPVL C+ LDDA DDD+L DEYKDFVSICDLYRAFTAMQMLATIVCSVSVLLLALAFFRPEAGKCAS RTLAFVGGALMATYALFQLVAVVLA VLAQEFDNLPNDDDTSY SGYDG Y+F++AGYEAEVG TFGVGVTALILAVIMTV LCLCA RTGDGPLYKCCHSLMLANKSNGIP SG EGG KGVPVVADL SVAAARPGATEQPSQ PP Y LPSA V
Sbjct: 1 MPPPQQQQGNECAPGFQCTPRLTFWVIAASSWLVWIFAVSAAADDKWIKDNGQGDWLAAGEDPVLNLCDGLDDAADDDLLATDEYKDFVSICDLYRAFTAMQMLATIVCSVSVLLLALAFFRPEAGKCASTRTLAFVGGALMATYALFQLVAVVLAAVLAQEFDNLPNDDDTSYLSGYDGFYTFFEAGYEAEVGPTFGVGVTALILAVIMTVVLCLCATRTGDGPLYKCCHSLMLANKSNGIPSSGGEGGXXXXXXKGVPVVADLP-----ASVAAARPGATEQPSQXXXXXXXXXXXXXPPPYGILPSAEV 307
BLAST of mRNA_E-siliculosus-1a_F_contig1006.99.1 vs. uniprot
Match:
A0A6H5KJK8_9PHAE (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJK8_9PHAE)
HSP 1 Score: 160 bits (406), Expect = 2.080e-43
Identity = 93/223 (41.70%), Postives = 131/223 (58.74%), Query Frame = 0
Query: 25 CTPRLTFWIIAASSWVVWIFAVSAAADDKWIKDNGQGDWLAAGEDPVLTFCEDLDDADDDDVLDADEYKDFVSICDLYRAFTAMQMLATIVCSVSVLLLALAFFRPEAG-KCASARTLAFVGGALMATYALFQLVAVVLAGVLAQEFDNLPNDDDTSYFSGYDGSYSFWDAGYEAEVGATFGVGVTALILAVIMTVALCLCARRTGDGPLYKCCHSLMLANKS 246
CTPRLTFWI A WV+W+FAV+A+ADDKW K +G + AG++ +L C+ DD +C LY+AFTAMQ +A +V SVS++L LA FRP AG KC S ++LA G+LM +A F+++A VL V+ +E D N T + G EA++GATFG+ V A++L V+ V++ AR +GDGP +KC + M N +
Sbjct: 72 CTPRLTFWISCALGWVIWVFAVAASADDKWAKIDGFD--IGAGDEDILDDCDSSDD-----------------VCSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAFVLIIVIEKELDGEFN---TGFGFG------------EADLGATFGLAVVAVVLGVVQAVSVLTFARSSGDGPFFKCLNECMAMNNA 260
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1006.99.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 2
M S Q P V V T M P P P Q Q Q P G N E C A P G F Q C T P R L T F W I I A A S S W V V W I F A V S A A A D D K W I K D N G Q G D W L A A G E D P V L T F C E D L D D A D D D D V L D A D E Y K D F V S I C D L Y R A F T A M Q M L A T I V C S V S V L L L A L A F F R P E A G K C A S A R T L A F V G G A L M A T Y A L F Q L V A V V L A G V L A Q E F D N L P N D D D T S Y F S G Y D G S Y S F W D A G Y E A E V G A T F G V G V T A L I L A V I M T V A L C L C A R R T G D G P L Y K C C H S L M L A N K S N G I P R S G S E G G V G G G G G K G V P V V A D L R E G S H H T S V A A A R P G A T E Q P S Q Q Q H Y E Q A Q P Q R Q P P P R Y D T L P S A G V * 50 100 150 200 250 300 Expect = 9.04e-172 / Id = 83.01 Expect = 2.08e-43 / Id = 41.70 Sequence A0A6H5L0F7_9PHAE A0A6H5KJK8_9PHAE back to top
InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M S Q P V V T M P P P Q Q Q P G N E C A P G F Q C T P R L T F W I I A A S S W V V W I F A V S A A A D D K W I K D N G Q G D W L A A G E D P V L T F C E D L D D A D D D D V L D A D E Y K D F V S I C D L Y R A F T A M Q M L A T I V C S V S V L L L A L A F F R P E A G K C A S A R T L A F V G G A L M A T Y A L F Q L V A V V L A G V L A Q E F D N L P N D D D T S Y F S G Y D G S Y S F W D A G Y E A E V G A T F G V G V T A L I L A V I M T V A L C L C A R R T G D G P L Y K C C H S L M L A N K S N G I P R S G S E G G V G G G G G K G V P V V A D L R E G S H H T S V A A A R P G A T E Q P S Q Q Q H Y E Q A Q P Q R Q P P P R Y D T L P S A G V * 50 100 150 200 250 300 Expect = 6.6E-7 / Score = 30.8 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence G3DSA:1.20.140.150 TRANSMEMBRANE TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TMhelix TMhelix TMhelix TMhelix PS00018
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available GENE3D 1.20.140.150 coord: 32..238 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 29..50 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 200..225 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 51..109 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 140..167 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 110..128 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..28 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 129..139 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 226..319 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 168..199 None No IPR available TMHMM TMhelix coord: 29..51 None No IPR available TMHMM TMhelix coord: 141..163 None No IPR available TMHMM TMhelix coord: 106..128 None No IPR available TMHMM TMhelix coord: 203..225 IPR018247 EF-Hand 1, calcium-binding site PROSITE PS00018 EF_HAND_1 coord: 80..92
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig1006.99.1 ID=prot_E-siliculosus-1a_F_contig1006.99.1|Name=mRNA_E-siliculosus-1a_F_contig1006.99.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=320bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR018247 EF_Hand_1_Ca_BS