prot_E-siliculosus-1a_F_contig11428.942.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11428.942.1
Unique Nameprot_E-siliculosus-1a_F_contig11428.942.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length150
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig11428.942.1 vs. uniprot
Match: A0A6H5JLD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD5_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.720e-18
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 0 
Query:   73 EEEEQSCSRHVGGFQESPGDVIVESPAKATTITELPKKVAAGGAAAVEGSCTRATP 128
            EEEEQ+C+R VGGFQ SPGDVIVESPAK  TITEL +K AAGG AAVEGSCT+  P
Sbjct:   42 EEEEQACNRQVGGFQGSPGDVIVESPAKTRTITELLEKAAAGGEAAVEGSCTKVAP 97
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11428.942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JLD5_9PHAE1.720e-1876.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11428contigE-siliculosus-1a_F_contig11428:1244..1693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11428.942.1mRNA_E-siliculosus-1a_F_contig11428.942.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11428 1244..1732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11428.942.1 ID=prot_E-siliculosus-1a_F_contig11428.942.1|Name=mRNA_E-siliculosus-1a_F_contig11428.942.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=150bp
PWRPHRPRLLLRLQQRSRLPPARRRRKRRPPLPAEPPPCKPAKTTGVPLR
ESLRRLKNRAQDEEACCLRCHCEEEEQSCSRHVGGFQESPGDVIVESPAK
ATTITELPKKVAAGGAAAVEGSCTRATPLTPATATWWTWSARRGTCRHS*
back to top