prot_E-siliculosus-1a_F_contig11367.903.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11367.903.1
Unique Nameprot_E-siliculosus-1a_F_contig11367.903.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length137
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig11367.903.1 vs. uniprot
Match: A0A6H5KWJ1_9PHAE (Methyltranfer_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWJ1_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.440e-67
Identity = 124/134 (92.54%), Postives = 125/134 (93.28%), Query Frame = 0 
Query:    2 PGRTSFRHHHTGHGNNGPAAAAVGLRPAYAAAAASGVEGAAAERLVSSYAATRSTARMGIVGAGVGRAVGRGLAAAAFATGGFLTRRTAVVGAAVAAVGLLGAVAIKVLDTPSRPYDADANTVGNEYDAWTEVG 135
            PGRTSFRHH TG  NNGPAAAAVGLRPAYAAA A GVEG A ERLVSSYAATRSTARMGIVGAGVGRAVGRGLAAAAFATGGFLTRRT VVGAAVAAVGLLGAVA+KVLDTPSRPYDADANTVGNEYDAWTE G
Sbjct:   46 PGRTSFRHHRTGGRNNGPAAAAVGLRPAYAAAVADGVEGTATERLVSSYAATRSTARMGIVGAGVGRAVGRGLAAAAFATGGFLTRRTVVVGAAVAAVGLLGAVAMKVLDTPSRPYDADANTVGNEYDAWTEDG 179
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BLAST of mRNA_E-siliculosus-1a_F_contig11367.903.1 vs. uniprot
Match: A0A835ZA13_9STRA (MPBQ/MSBQ transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA13_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.870e-6
Identity = 31/50 (62.00%), Postives = 34/50 (68.00%), Query Frame = 0 
Query:   86 TRRTAVVGAAVAAVGLLGAVAIKVLDTPSRPYDADANTVGNEYDAWTEVG 135
            TRR A+  AA  AV L   V   +LD PSRPYD +ANTVGNEYDAW E G
Sbjct:   82 TRRAAIAVAATTAVVL---VVKALLDKPSRPYDREANTVGNEYDAWCEDG 128
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BLAST of mRNA_E-siliculosus-1a_F_contig11367.903.1 vs. uniprot
Match: A0A830H9M2_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H9M2_9CHLO)

HSP 1 Score: 54.3 bits (129), Expect = 7.170e-6
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:   95 AVAAVGLLGAVAIKVLDTPSRPYDADANTVGNEYDAWTEVGGL 137
            A AA+  +   A K+LDTPSR Y A A+TVGNEYDAWTE G L
Sbjct:   86 ATAALATIALAAKKILDTPSREYVAGADTVGNEYDAWTEEGVL 128
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BLAST of mRNA_E-siliculosus-1a_F_contig11367.903.1 vs. uniprot
Match: A0A7S2ARK4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2ARK4_9CHLO)

HSP 1 Score: 51.2 bits (121), Expect = 1.570e-5
Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 0 
Query:  108 KVLDTPSRPYDADANTVGNEYDAWTEVGGL 137
            K+LDTPSR Y A A+TVGNEYDAWTE G L
Sbjct:    3 KILDTPSREYVAGADTVGNEYDAWTEEGVL 32
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BLAST of mRNA_E-siliculosus-1a_F_contig11367.903.1 vs. uniprot
Match: A0A7S2C8Q8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C8Q8_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 6.240e-5
Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = 0 
Query:   96 VAAVGLLGAVAIKVLDTPSRPYDADANTVGNEYDAWTEVG 135
            VA V +   V  K+LDTPSR Y+ + NTVG EYDAWTE G
Sbjct:  103 VAGVAVAAPVIKKILDTPSRTYNREENTVGKEYDAWTEEG 142
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11367.903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KWJ1_9PHAE1.440e-6792.54Methyltranfer_dom domain-containing protein n=2 Ta... [more]
A0A835ZA13_9STRA2.870e-662.00MPBQ/MSBQ transferase n=1 Tax=Tribonema minus TaxI... [more]
A0A830H9M2_9CHLO7.170e-662.79Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A7S2ARK4_9CHLO1.570e-576.67Hypothetical protein (Fragment) n=1 Tax=Pycnococcu... [more]
A0A7S2C8Q8_9STRA6.240e-560.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..110
NoneNo IPR availableTMHMMTMhelixcoord: 90..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11367contigE-siliculosus-1a_F_contig11367:245..1252 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11367.903.1mRNA_E-siliculosus-1a_F_contig11367.903.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11367 245..1252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11367.903.1 ID=prot_E-siliculosus-1a_F_contig11367.903.1|Name=mRNA_E-siliculosus-1a_F_contig11367.903.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=137bp
APGRTSFRHHHTGHGNNGPAAAAVGLRPAYAAAAASGVEGAAAERLVSSY
AATRSTARMGIVGAGVGRAVGRGLAAAAFATGGFLTRRTAVVGAAVAAVG
LLGAVAIKVLDTPSRPYDADANTVGNEYDAWTEVGGL
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