Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1002.79.1 vs. uniprot
Match:
D7FI89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI89_ECTSI)
HSP 1 Score: 95.1 bits (235), Expect = 1.420e-24
Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 1
Query: 1 GYDGGDCCECTCEVGNPWDDDDDSTCSHQNYGFACIDPAAPCVDDDDITAVMVEN 165
GYDGGDCCECTCE +PWDDD+D CS GFACIDPAAPCV+DDDITAVMVEN
Sbjct: 3 GYDGGDCCECTCE--SPWDDDNDWLCSSDGSGFACIDPAAPCVEDDDITAVMVEN 55
BLAST of mRNA_E-siliculosus-1a_F_contig1002.79.1 vs. uniprot
Match:
A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)
HSP 1 Score: 89.0 bits (219), Expect = 2.530e-19
Identity = 43/60 (71.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 1 GYDGGDCCECTCEV-----GNPWDDDDDSTCSHQNYGFACIDPAAPCVDDDDITAVMVEN 165
GYDGGDCCECTC +PWDDDDD CS GFACIDPAAPCV+DDDITA MVEN
Sbjct: 74 GYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVEN 133
BLAST of mRNA_E-siliculosus-1a_F_contig1002.79.1 vs. uniprot
Match:
D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)
HSP 1 Score: 87.4 bits (215), Expect = 8.770e-19
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 1
Query: 1 GYDGGDCCECTCEVGNPWDDDDDSTCSHQNYGFACIDPAAPCVDDDDITAVMVEN 165
GYDGGDCCECTC+ NPW DDD+ CS YGFACIDP APCVDDDDIT + +N
Sbjct: 44 GYDGGDCCECTCQ--NPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQN 96
BLAST of mRNA_E-siliculosus-1a_F_contig1002.79.1 vs. uniprot
Match:
A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)
HSP 1 Score: 82.0 bits (201), Expect = 6.930e-17
Identity = 38/55 (69.09%), Postives = 40/55 (72.73%), Query Frame = 1
Query: 1 GYDGGDCCECTCEVGNPWDDDDDSTCSHQNYGFACIDPAAPCVDDDDITAVMVEN 165
GYDGGDCCECTC NPW DDDD CS GFACIDP A CVDDDDIT + +N
Sbjct: 20 GYDGGDCCECTCV--NPWGDDDDWVCSKDGSGFACIDPDASCVDDDDITVEIAQN 72
BLAST of mRNA_E-siliculosus-1a_F_contig1002.79.1 vs. uniprot
Match:
D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)
HSP 1 Score: 79.0 bits (193), Expect = 8.260e-16
Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 1 GYDGGDCCECTCEVGNP--WDDDDDSTCSHQNYGFACIDPAAPCVDDDDITAVMVEN 165
GYDGGDCCECTCE +P WDDD D C FACIDP+APCVDDDDIT MVEN
Sbjct: 214 GYDGGDCCECTCEYESPYDWDDDWDYHCME----FACIDPSAPCVDDDDITVDMVEN 266
BLAST of mRNA_E-siliculosus-1a_F_contig1002.79.1 vs. uniprot
Match:
D7FI92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI92_ECTSI)
HSP 1 Score: 65.9 bits (159), Expect = 3.650e-13
Identity = 36/56 (64.29%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 GYDGGDCCECTCEVGNP-WDDDDDSTCSHQNYGFACIDPAAPCVDDDDITAVMVEN 165
GYDGGDCCECTC+V N W + +Y FACID APCVDDDDITA MVEN
Sbjct: 8 GYDGGDCCECTCQVTNSGWG-------CNPDY-FACIDLEAPCVDDDDITAEMVEN 55
BLAST of mRNA_E-siliculosus-1a_F_contig1002.79.1 vs. uniprot
Match:
D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)
HSP 1 Score: 70.1 bits (170), Expect = 7.040e-13
Identity = 36/55 (65.45%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 1 GYDGGDCCECTCEVGNPWDDDDDSTCSHQNYGFACIDPAAPCVDDDDITAVMVEN 165
GYDGGDCCECTC N WDDD +C+ + ACIDP+APCVDDDD+T MVEN
Sbjct: 76 GYDGGDCCECTCV--NAWDDD--YSCAANS---ACIDPSAPCVDDDDVTVDMVEN 123
BLAST of mRNA_E-siliculosus-1a_F_contig1002.79.1 vs. uniprot
Match:
A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE)
HSP 1 Score: 69.3 bits (168), Expect = 2.050e-12
Identity = 36/57 (63.16%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 1 GYDGGDCCECTCEVGNP--WDDDDDSTCSHQNYGFACIDPAAPCVDDDDITAVMVEN 165
GYDGGDCCECTCE +P WDDD D C F+CIDP A CV DDDIT M EN
Sbjct: 114 GYDGGDCCECTCEYESPYDWDDDWDYHCRE----FSCIDPNAACVSDDDITVDMFEN 166
BLAST of mRNA_E-siliculosus-1a_F_contig1002.79.1 vs. uniprot
Match:
A0A6H5K2J7_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J7_9PHAE)
HSP 1 Score: 66.2 bits (160), Expect = 2.690e-12
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 1 GYDGGDCCECTCEVGNPWDDDDDSTCSHQNYGFACIDPAAPCVDDDDITAVMVEN 165
GYDGGDCCECTC+ + DDD S +++Y ACIDP A CVDDDD+TA MVEN
Sbjct: 51 GYDGGDCCECTCQTQS--DDDYYSWGCNKDY-MACIDPDASCVDDDDVTAEMVEN 102
BLAST of mRNA_E-siliculosus-1a_F_contig1002.79.1 vs. uniprot
Match:
D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)
HSP 1 Score: 68.6 bits (166), Expect = 3.800e-12
Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 1 GYDGGDCCECTCEV--GNPWDDDDDSTCSHQNYGFACIDPAAPCVDDDDITAVMVEN 165
GYDGGDCCECTCEV + WD+D C GFACIDP+APCV+DDDIT + E+
Sbjct: 124 GYDGGDCCECTCEVPTDDDWDNDLYVACGE---GFACIDPSAPCVNDDDITVDVDES 177
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1002.79.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.42e-24 / Id = 80.00 Expect = 2.53e-19 / Id = 71.67 Expect = 8.77e-19 / Id = 70.91 Expect = 6.93e-17 / Id = 69.09 Expect = 8.26e-16 / Id = 70.18 Expect = 3.65e-13 / Id = 64.29 Expect = 7.04e-13 / Id = 65.45 Expect = 2.05e-12 / Id = 63.16 Expect = 2.69e-12 / Id = 63.64 Expect = 3.80e-12 / Id = 61.40 Sequence D7FI89_ECTSI A0A6H5JM92_9PHAE D7FI87_ECTSI A0A6H5JXR2_9PHAE D7G3F4_ECTSI D7FI92_ECTSI D7G0S4_ECTSI A0A6H5KB04_9PHAE A0A6H5K2J7_9PHAE D7G4F9_ECTSI Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1002.79.1
>prot_E-siliculosus-1a_F_contig1002.79.1 ID=prot_E-siliculosus-1a_F_contig1002.79.1|Name=mRNA_E-siliculosus-1a_F_contig1002.79.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=55bp
GYDGGDCCECTCEVGNPWDDDDDSTCSHQNYGFACIDPAAPCVDDDDITA back to top mRNA from alignment at E-siliculosus-1a_F_contig1002:18785..20351+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1002.79.1 ID=mRNA_E-siliculosus-1a_F_contig1002.79.1|Name=mRNA_E-siliculosus-1a_F_contig1002.79.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1567bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1002:18785..20351+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GGCTACGACGGGGGCGACTGCTGCGAGTGCACGTGTGAGGTAGGCAA GTC
GAAAAGCAAGTGGAAGTTCTAAAGAGTTCATCCTTTGGGCCCTGTCGCCA
TGGAATCTATCTCCAGTTATCTGCTCTGAATAACTGCGTCGCAATTCTGA
AAACTCTATTGTACGCGAGGGACTTTTGCAATTCTGCCGTCTCACATGTG
TGGTGAAGTACATAATTGGCACGGTTTCTCACGGTTTCTCACGTTCAGTA
GCAGCAGTAGGTCTGCAGAAACAGAGACAACAGTCTAGTATCCAATGAAC
GACACGAAGATTTGAACCATTATTGCGTTTGCACGTGCTCTGTACTCTCT
GCCGTCAGGTACCGGTCAGACCCCCTTTACTGACCGGCAACATACCGTAA
ACCAGCAATCCGCTTTACCGACCAGTAAATTACCGCAAGAAGCGGGGATG
ACAAACAACTGTCCCCGGGGTTTCCAGTCGTTTCGTTCATTTGTGCTGTG
TGCCGACCGGAGCTCTGGTACACCACCCCAAACAGCAGTAGTGTTGCGTT
GATGCTGTGACCCATCAACAAATTGATGGCGTGCGGCACCTTAAAAGTGT
ACCGAACCCGAAACCAGCAGTGAATGAATGTGTTGTTGAACAAGGTTCTT
GCAAAGATGTGTGTAGGCATGTTAGTTGGTTTCGGCGGGTGAGCAGGATG
CAGGAAGGTTGCCCATTCGAGTGGCTCACCCCTCGTCTACAGCTCCACAT
CATTTATCAACAACAAAGAGAAGAAAACAATCACAAAAGCCAGATGAAGG
CCCCTTGTTGAAATGTTTATCACGTACGTTCCCGTACATGCGTGGTCTCC
GCATCTGTTCCCCGAAGAACCGACGGCAAACTCAAAACAGGAGTGCTCGA
AAGCGAGCCCCAAGAATCCGTTGGTTTTGCGGTGCCTGAATGTCTGTGGC
CTGCTGCAGATAAGCTAAGCTCTGACCTCGAGAGAGACTCAATGTGGAGT
GTGGAAAGCTGCAGCAGCTGCTTCCCCCGCAAGGCAGGGACTGAGGGGGG
GGCGCAAATGGGGGTGGGGGTGTGCCGAGAATGTCGAGAATTACCTCTAT
TTTTGACTTGACCGACCCTGCCAACCCTTTACAGGTAAAGGTACTGGTCA
AGGGTAACTGACATCCTTGGTTTCCTACTGACCTCGCTACCGCTCTGTGT
GCCATACTCCATCCTCGCGCGGACGCGTGGTCCATGGCCTAACATCTAGG
GCATGCGAAAGATGAGTACCCCCCCCCCCCTACTGTCCTCTCTAGTACTC
GGAAACGCAAGTTCCTCCTGCTACAGCCAAGGCGAGTCCTGCCTGGCTTG
TCACGTGCTTCCTTGATCCCTGACCTCCCGTCCATCCCGCCTTCCTCATT
CCTGAACACGTACTGGTCTTGGTCTGACCTGCTCACGCATGTGCCAGAGC
CCATGGGACGACGACGACGACTCGACTTGCTCCCACCAAAATTACGGGTT
TGCCTGCATCGACCCCGCAGCACCGTGTGTTGACGATGACGATATCACCG
CCGTGATGGTGGAGAAC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1002:18785..20351+
>mRNA_E-siliculosus-1a_F_contig1002.79.1 ID=mRNA_E-siliculosus-1a_F_contig1002.79.1|Name=mRNA_E-siliculosus-1a_F_contig1002.79.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=330bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1002:18785..20351+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top