prot_E-siliculosus-1a_F_contig10002.68.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10002.68.1
Unique Nameprot_E-siliculosus-1a_F_contig10002.68.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length79
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10002.68.1 vs. uniprot
Match: D8LG36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG36_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 6.130e-47
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0
Query:    1 MSGLFRRNSSQPLFLCISCALLEPCSHFGKGRKQDTLGNRAITCSTVMPVDFYGRRLTPDDESDPLHVACSFEILQEDA 79
            MS LFRRN+SQPLFLCISCALL  CS FGKGRKQDTLGN AITCSTVMPVDFYGRRLTPDDESDPLHVACSFEIL+EDA
Sbjct:    1 MSSLFRRNASQPLFLCISCALLGSCSQFGKGRKQDTLGNHAITCSTVMPVDFYGRRLTPDDESDPLHVACSFEILKEDA 79          
BLAST of mRNA_E-siliculosus-1a_F_contig10002.68.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 7.190e-14
Identity = 38/50 (76.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:   30 KGRKQDTLGNRAITCSTVMPVDFYGRRLTPDDESDPLHVACSFEILQEDA 79
            K RKQDT  NRAI CST MPVD YGRRLTP DESDPL VA   E LQEDA
Sbjct:  586 KARKQDTPANRAIMCSTKMPVDVYGRRLTPVDESDPLLVARGLEALQEDA 635          
BLAST of mRNA_E-siliculosus-1a_F_contig10002.68.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 4.720e-13
Identity = 36/49 (73.47%), Postives = 38/49 (77.55%), Query Frame = 0
Query:   30 KGRKQDTLGNRAITCSTVMPVDFYGRRLTPDDESDPLHVACSFEILQED 78
            K RKQDT GNRAI CST MPVD YGRRLTP DES+PL VA   E LQ+D
Sbjct: 1298 KARKQDTPGNRAIMCSTKMPVDVYGRRLTPADESNPLLVARDLEALQKD 1346          
BLAST of mRNA_E-siliculosus-1a_F_contig10002.68.1 vs. uniprot
Match: A0A6H5JHL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHL7_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 6.320e-13
Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 0
Query:   30 KGRKQDTLGNRAITCSTVMPVDFYGRRLTPDDESDPLHVACSFEILQED 78
            K R+QDT  NRAI CST  PV+ YGRRLTPDDESDPL +A S E LQED
Sbjct:  351 KAREQDTPENRAIMCSTKRPVEGYGRRLTPDDESDPLRIARSLETLQED 399          
BLAST of mRNA_E-siliculosus-1a_F_contig10002.68.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 4.170e-12
Identity = 35/50 (70.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   30 KGRKQDTLGNRAITCSTVMPVDFYGRRLTPDDESDPLHVACSFEILQEDA 79
            K RKQDT  NR+I CST  PV+ YGRRLT DDESDPL V  S E LQEDA
Sbjct:  929 KARKQDTPENRSIMCSTKRPVEGYGRRLTADDESDPLRVGRSLETLQEDA 978          
BLAST of mRNA_E-siliculosus-1a_F_contig10002.68.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 1.400e-8
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = 0
Query:   33 KQDTLGNRAITCSTVMPVDFYGRRLTPDDESDPLHVACSFE 73
            KQD+  NRAI CSTVMPVD YGRRL+  DESDPL VA   E
Sbjct: 1165 KQDSPDNRAIMCSTVMPVDVYGRRLSASDESDPLRVAKMIE 1205          
BLAST of mRNA_E-siliculosus-1a_F_contig10002.68.1 vs. uniprot
Match: A0A6H5L4M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.230e-7
Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 0
Query:   33 KQDTLGNRAITCSTVMPVDFYGRRLTPDDESDPLHVACSFE 73
            KQD+  NRAI CST+MPVD YGRRL+  DE DPL VA   E
Sbjct:  476 KQDSPDNRAIMCSTMMPVDVYGRRLSASDEGDPLRVAKMIE 516          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10002.68.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LG36_ECTSI6.130e-4791.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LJP6_9PHAE7.190e-1476.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI37_ECTSI4.720e-1373.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHL7_9PHAE6.320e-1371.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI63_ECTSI4.170e-1270.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI39_ECTSI1.400e-870.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4M7_9PHAE1.230e-765.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..79
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10002contigE-siliculosus-1a_F_contig10002:110..708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10002.68.1mRNA_E-siliculosus-1a_F_contig10002.68.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10002 110..708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10002.68.1 ID=prot_E-siliculosus-1a_F_contig10002.68.1|Name=mRNA_E-siliculosus-1a_F_contig10002.68.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=79bp
MSGLFRRNSSQPLFLCISCALLEPCSHFGKGRKQDTLGNRAITCSTVMPV
DFYGRRLTPDDESDPLHVACSFEILQEDA
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