mRNA_E-siliculosus-1a_F_contig1094.649.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1094.649.1
Unique NamemRNA_E-siliculosus-1a_F_contig1094.649.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: D8LP06_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP06_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 1.790e-141
Identity = 226/240 (94.17%), Postives = 228/240 (95.00%), Query Frame = 2 
Query:  113 MYNLLCVAAAALACLSTANAFGLGGVAARGACRVSXXXXXXXXXX-VARRSLVPPSMSTMEASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAMLNKERVDHKQVLKEQKLAARRARGYEK 829
            MYNLLCVAAAALACLSTANAFGLGG AARGACRVS           VARRSLVPPSMSTMEASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYF+KEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAMLNKERVDHKQVLKEQKLAARRARGY+K
Sbjct:    1 MYNLLCVAAAALACLSTANAFGLGGGAARGACRVSRASKAASSVTSVARRSLVPPSMSTMEASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFKKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAMLNKERVDHKQVLKEQKLAARRARGYDK 240
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A835ZJ48_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ48_9STRA)

HSP 1 Score: 179 bits (453), Expect = 5.010e-48
Identity = 88/164 (53.66%), Postives = 126/164 (76.83%), Query Frame = 2 
Query:  257 RSLVPPSMSTMEASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAM 748
            RS   P ++ +  S A+DVLADL+ LD+ M  + +D  DL+P+Q YLN+LA QAA+ +W++++ D+GS  + VAI+TE+I+YLTKH+Q HP D+HSRRGLI +VN RR QLNY F  EP+ CL++CA+LGIRF+P++ V+ REQ+Y+++ NTKSKIG  R  A+
Sbjct:   63 RSCSQPLVAPLRMSDASDVLADLEALDNAMSDDKEDS-DLEPRQPYLNRLAMQAARREWQRSENDSGSAEVQVAIMTERIIYLTKHLQTHPKDFHSRRGLIALVNNRRSQLNYLFENEPQRCLDLCASLGIRFKPRSAVQSREQKYSSFKNTKSKIGMLRAAAL 225
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A835ZDP8_9STRA (Tetrapyrrole methylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP8_9STRA)

HSP 1 Score: 174 bits (442), Expect = 3.670e-43
Identity = 86/152 (56.58%), Postives = 121/152 (79.61%), Query Frame = 2 
Query:  293 ASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAM 748
            +  A+DVLADL+ LDSV+  + +D  DL+P+Q YLN+LA QAA+ +W+++D D+GS  + VAI+TE+I+YLTKHMQ HP D+HSRRGLI +VNKRR QLN+ F  + + CLE+CA+LGIRF+P++ V+ REQ+Y+++ NTKSKIG  R  A+
Sbjct:   46 SDSASDVLADLEALDSVLSEDKEDA-DLEPRQPYLNRLAMQAARREWQRSDNDSGSAEVQVAIMTERIIYLTKHMQTHPKDFHSRRGLIALVNKRRSQLNFLFEHDAERCLELCASLGIRFKPRSAVQSREQKYSSFKNTKSKIGMLRAAAL 196
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7S2S8K6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8K6_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.310e-23
Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = 2 
Query:  392 YLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAY 703
            +LN  A  AAQ KW+++D D+GSP   +A+  E+I YLT H+Q++P D+ SRRGL+ +VNKRRR LNY +RK P++ + M   LG+RF+P   V+ RE++YA Y
Sbjct:  112 FLNLQALLAAQQKWKRHDSDSGSPEYQIAVAHERIKYLTAHLQRNPKDFASRRGLVAIVNKRRRLLNYLYRKNPEKAMGMVTELGVRFKPPGTVQTREEKYAVY 215
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A482SQL1_9ARCH (30S ribosomal protein S15 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQL1_9ARCH)

HSP 1 Score: 106 bits (264), Expect = 3.240e-23
Identity = 58/135 (42.96%), Postives = 92/135 (68.15%), Query Frame = 2 
Query:  398 NKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAMLNKERVDHKQVLKEQKLA 802
            N+ A  AA LKWR++++DTGSP + VA++TE+I YLT H+ +HP D  ++RGL  +VN RR  LN+    + ++  +MCA LGIR++P  +V  +E +Y+A+ NTK+K   A++   L K+R   KQ L ++++A
Sbjct:    4 NRAAIAAAILKWRRDERDTGSPEVQVAVMTERIRYLTSHLLKHPQDKSTKRGLTALVNDRRNNLNFLHSVDAEKARQMCAELGIRWKPPGQVWDKEAKYSAFKNTKNKKAEAKK---LVKKRA--KQALLDKQMA 133
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7S0CN17_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CN17_9STRA)

HSP 1 Score: 102 bits (253), Expect = 5.950e-21
Identity = 56/138 (40.58%), Postives = 86/138 (62.32%), Query Frame = 2 
Query:  308 DVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSK 721
            D L ++ ELD    V T +  D     A+  +L   A + +WR +D D GSP + VA +TE+I YLT+H+++HP D+ ++RGL+ +VNKRR+ LNY + K P+   E+ A LG+R +P  +V+ R ++Y AY   K K
Sbjct:   70 DFLLNIGELDPADNVPTDEVPD---NYAHQQRLI--ATRKEWRTSDIDCGSPDVQVAGMTERITYLTRHLKEHPKDFSTKRGLLALVNKRRKLLNYLYSKNPERYAELVAALGVRHKPVGRVQSRSEKYGAYPQQKPK 202
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7S1C329_9STRA (30S ribosomal protein S15 n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C329_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.430e-20
Identity = 54/138 (39.13%), Postives = 86/138 (62.32%), Query Frame = 2 
Query:  308 DVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSK 721
            D + + +ELD+    E++      P  +Y + ++    + KW + + D+GSP   +A +TE+I+YLTKHMQQ+P D+ +RRGL+ +VNKRRR LNY FR    + +E+ A+LGIR +   +V  RE+ Y  ++  K K
Sbjct:   19 DYILESNELDASEDTESE------PSSSYTHSVSLDEIRKKWARAENDSGSPEFQIAGMTERIMYLTKHMQQNPKDFSTRRGLLALVNKRRRLLNYLFRVNQDKYVEIIASLGIRHKAPGRVMTREEVYGRFSQRKKK 150
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7R9ZK55_9STRA (30S ribosomal protein S15 n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZK55_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.750e-20
Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = 2 
Query:  431 WRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKS 718
            WR++++DTGSP   VA +TE+I YLTKH+QQ+P DY +RRGL+ +VNKRRR LNY  R++ ++  ++ ++LGIR +   +V  RE +Y  +   KS
Sbjct:   82 WRRSEKDTGSPEFQVAGMTERISYLTKHLQQNPKDYSTRRGLVALVNKRRRLLNYLIREDEQKYADIISSLGIRHKAPGRVESREDKYGRFNKQKS 177
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7S2IEZ5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IEZ5_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.800e-19
Identity = 55/144 (38.19%), Postives = 87/144 (60.42%), Query Frame = 2 
Query:  290 EASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSK 721
            EA  A D +    +LD     +  D   L   + Y ++L  Q  +L++R+++ DTGSP   VA +TE+I YLTKH+++HP D+ +RRGL+ +VNKRRR LNY FR++ +    +  ++GIR +   +V+ RE +Y  +   K K
Sbjct:   60 EAEEAEDFIVSAGDLDDEDAGDEDD--SLAVPEWYAHQLRVQELRLQYRRHENDTGSPEYQVAGMTERISYLTKHLKEHPKDFSTRRGLVALVNKRRRLLNYLFREDIERYRAIVTSMGIRHKAPGRVQSREDKYGRFPPQKEK 201
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BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7S1XRX6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRX6_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 4.700e-19
Identity = 49/104 (47.12%), Postives = 73/104 (70.19%), Query Frame = 2 
Query:  392 YLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAY 703
            + NK A  AA  K++K+++DTGS    +A L+ +I Y+T+H ++HP D+HSRRGLITMVNKRRR LNY  + +P+    + + LGIRF+   ++  R +RYAA+
Sbjct:  107 WSNKQAINAATEKFKKHEKDTGSAEFQIAKLSARITYMTEHAKRHPKDHHSRRGLITMVNKRRRLLNYLNKTDPEAVERITSELGIRFKAAGRIMTRAERYAAF 210
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP06_ECTSI1.790e-14194.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZJ48_9STRA5.010e-4853.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDP8_9STRA3.670e-4356.58Tetrapyrrole methylase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2S8K6_9STRA2.310e-2350.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SQL1_9ARCH3.240e-2342.9630S ribosomal protein S15 n=1 Tax=archaeon TaxID=1... [more]
A0A7S0CN17_9STRA5.950e-2140.58Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1C329_9STRA1.430e-2039.1330S ribosomal protein S15 n=2 Tax=Corethron hystri... [more]
A0A7R9ZK55_9STRA6.750e-2047.9230S ribosomal protein S15 n=2 Tax=Craspedostauros ... [more]
A0A7S2IEZ5_9STRA3.800e-1938.19Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1XRX6_9STRA4.700e-1947.12Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1094contigE-siliculosus-1a_F_contig1094:14803..20719 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size720
Model size2093
Exons5
Ec32 orthologEc-06_007070.1
Ec32 ortholog descriptionRibosomal protein S15, bacterial-type
Hectar predicted targeting categorychloroplast
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04050,ko04090
Best eggNOG OGNA|NA|NA
Best tax levelBacillariophyta
COG Functional cat.J
EggNOG OGs2XCVW@2836,COG0184@1,KOG2815@2759
EggNOG free text desc.Belongs to the universal ribosomal protein uS15 family
GOsGO:0000313,GO:0000314,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005761,GO:0005763,GO:0005840,GO:0006412,GO:0006414,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0019866,GO:0022411,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032543,GO:0032984,GO:0032991,GO:0034641,GO:0034645,GO:0040008,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0065007,GO:0070013,GO:0070125,GO:0070126,GO:0071704,GO:0071840,GO:0098798,GO:0140053,GO:1901564,GO:1901566,GO:1901576,GO:1990904
KEGG ModuleM00178,M00179
KEGG Pathwayko03010,ko04060,ko04151,ko04630,ko04640,ko05200,map03010,map04060,map04151,map04630,map04640,map05200
KEGG koko:K02956,ko:K05061
Preferred nameMRPS15
Seed eggNOG ortholog2850.Phatr7893
Seed ortholog evalue3.3e-15
Seed ortholog score89.0
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927596.7159119-UTR-E-siliculosus-1a_F_contig1094:14802..160631622927596.7159119-UTR-E-siliculosus-1a_F_contig1094:14802..16063Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1094 14803..16063 -
1696318603.6910937-UTR-E-siliculosus-1a_F_contig1094:14802..160631696318603.6910937-UTR-E-siliculosus-1a_F_contig1094:14802..16063Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1094 14803..16063 -
1622927596.825826-UTR-E-siliculosus-1a_F_contig1094:20607..207191622927596.825826-UTR-E-siliculosus-1a_F_contig1094:20607..20719Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1094 20608..20719 -
1696318603.7594116-UTR-E-siliculosus-1a_F_contig1094:20607..207191696318603.7594116-UTR-E-siliculosus-1a_F_contig1094:20607..20719Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1094 20608..20719 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927596.730033-CDS-E-siliculosus-1a_F_contig1094:16063..162071622927596.730033-CDS-E-siliculosus-1a_F_contig1094:16063..16207Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 16064..16207 -
1696318603.701131-CDS-E-siliculosus-1a_F_contig1094:16063..162071696318603.701131-CDS-E-siliculosus-1a_F_contig1094:16063..16207Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 16064..16207 -
1622927596.7516935-CDS-E-siliculosus-1a_F_contig1094:16917..170231622927596.7516935-CDS-E-siliculosus-1a_F_contig1094:16917..17023Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 16918..17023 -
1696318603.7090797-CDS-E-siliculosus-1a_F_contig1094:16917..170231696318603.7090797-CDS-E-siliculosus-1a_F_contig1094:16917..17023Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 16918..17023 -
1622927596.7658772-CDS-E-siliculosus-1a_F_contig1094:17597..177911622927596.7658772-CDS-E-siliculosus-1a_F_contig1094:17597..17791Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 17598..17791 -
1696318603.7163405-CDS-E-siliculosus-1a_F_contig1094:17597..177911696318603.7163405-CDS-E-siliculosus-1a_F_contig1094:17597..17791Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 17598..17791 -
1622927596.7779233-CDS-E-siliculosus-1a_F_contig1094:19465..196241622927596.7779233-CDS-E-siliculosus-1a_F_contig1094:19465..19624Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 19466..19624 -
1696318603.724878-CDS-E-siliculosus-1a_F_contig1094:19465..196241696318603.724878-CDS-E-siliculosus-1a_F_contig1094:19465..19624Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 19466..19624 -
1622927596.7908974-CDS-E-siliculosus-1a_F_contig1094:20490..206071622927596.7908974-CDS-E-siliculosus-1a_F_contig1094:20490..20607Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 20491..20607 -
1696318603.7436657-CDS-E-siliculosus-1a_F_contig1094:20490..206071696318603.7436657-CDS-E-siliculosus-1a_F_contig1094:20490..20607Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1094 20491..20607 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1094.649.1prot_E-siliculosus-1a_F_contig1094.649.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1094 16064..20607 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1094.649.1

>prot_E-siliculosus-1a_F_contig1094.649.1 ID=prot_E-siliculosus-1a_F_contig1094.649.1|Name=mRNA_E-siliculosus-1a_F_contig1094.649.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=240bp
MYNLLCVAAAALACLSTANAFGLGGVAARGACRVSRASKASSVTSVARRS
LVPPSMSTMEASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAG
QAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLIT
MVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNT
KSKIGNARRTAMLNKERVDHKQVLKEQKLAARRARGYEK*
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mRNA from alignment at E-siliculosus-1a_F_contig1094:14803..20719-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1094.649.1 ID=mRNA_E-siliculosus-1a_F_contig1094.649.1|Name=mRNA_E-siliculosus-1a_F_contig1094.649.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5917bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1094:14803..20719- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGGTAATTTACGTACCTACACCTTAAGAGGTACCGCCACCGCAGCTCTCG
CCTGATAACTCAATTGAAGGCGTGTGGTAAGCACCATATCTCGGTGGGGT
CCTCTTTAGACTATGTACAACCTTCTCTGCGTCGCGGCTGCGGCTCTGGC
GTGCTTGTCCACGGCAAACGCATTCGGGCTTGGGGGCGTAGCGGCGAGAG
GAGCATGCAGAGTCTCACGCGCATCAAAGGTATGCTTAGCAGAGAAGAGG
CCAGATGGCGAGGCAATAACACTGGCTCTGCTCTGCGAGTCGGCCGTGGG
CGTAATGCCACTGATGGGGCAGTCTGTTTTGGGCAGTCCGTGTTGGTCCG
GTACACCTGTTGCGCATTTTTGCTCTGGGAGGCTTGGTTTGACCTCACGT
TTTGCTCGTTGTCGGCCGGTGAGACAGACAAGGACCCAGGTGTACCCAGG
ACGCCGGATTATGCTCAGCTCTGGCAGCCGTGTATGCGAACTCTCTTCGA
TCCACTTAGAGTTTACTACCACTCTTCCTTGGTTCTGGCGGCCGGTCCAA
CCCACCAATTTCGTTTGGTCTCTCTGTAGTTGAACGTGTGTGTAGCAGGA
GAGACCAAAAGAAACATGAGGCAACACTAGGGGCCGCCGTCGCCTCAGAA
AACATGTTTCATTGTGCCATACGTCACAGGGGGGGCAACCTGCTTTCTAG
CGCGGGGTCGGAGTGATTCATGCTCGAGTGCTCCCACTGTCTTTGTGTAT
TTTCTGGTGCTCGTCCTGCTGTGTGCCCCTTCATGTCGATCTATGTAAGT
TTACGCCCAAAATTGCGTTGTCATCAGTTGGTGCGATGCGAACCGTCGGT
CGTTGGCTCTTGCCTACACTAGTAGTCCACGATACACGGCACCCCCGTTG
CCGTGCTCTGCAGCAATGCGCAGGCAACGTGTTCGGCTCACACAGCGGTG
ATCCACTACCGACATGATGCAACGGGGTGTTGACGCTAGCAGTGTTGTGC
GTTGGTGGTGCTGTGCGTTCTGAACGATATCATATCGTACTCCGACGGCG
AACGCTTTCTTCCTCAACTCCCCCACTACCGCGTCAACATGACAGGCTTC
TTCCGTCACTAGCGTGGCTCGCCGATCCCTCGTGCCGCCGTCGATGTCGA
CGATGGAGGCGTCCGGGGCGGCGGATGTCTTGGCAGACCTTGACGAGTTG
GACTCGGTCATGGGCGTGGAAACGCAGGACCAGCAGGACCTCAAGCCGAA
GCAGGTTTGTGTTGTGTGCATTACTTAAAAGCGTGTTAGATACATACAAA
AGCGTAGAGTGGTAGATGTACGGGGTACATAGGCCCGGGCTACAATTGTA
CCACGGGACCGTTGACAAGGACAGCTATCTGGGCAGCAAAGAAAGCAGAA
TGCCTCCTACCGGTCCGGAGGGATGCGTGTGTTCGTCCTTACCCTGGCAT
GACATATAGTGGCTGCGCTGATGGAATAATTTTTTTCCACCTTCCACCAA
ACCGTTGTCCCCTAGCTGTGGATTCGCCAACGCCCATGGCCGTCAGTTGT
TCTCGTTTTTGGTGGAATACTTGCGAGCAATCCCGCGGCGGAAGCAGCAG
TGTTTAGAATACAGCAGTAACATAACTCGCGGTAAAGACTATTGTACCCA
CTCGAAATGTACCACAGCAGCAGCGAGTGTTCTTGAATGAACATATGAAA
GATTTGGGTTCTTCGTTTCGAAAAATACGTGTCTGCTTTTGCGCCAAACG
GAAGGGGAACAAGCTGAAAATAGGGCTGTAGCCCGGTGGTACTGATTGAT
GTTGCACCCTCTGATGAGATGTCGTGTAGTCTAACCGTCCCTGCAAGTAC
ATGCTGCACGAGCACCGCCATATGAATTTGAAGGCTGATTCGGACACAAA
ACGCCTCCACCGAGTTGAAATTGAATGTGCTCACGGTCCTGGTGTGTCTC
TACCTGCTGATGGGTGGTGTGAGAAACGCGACAACAGCAGTTGGCGATAA
GTAGGTGGTGCATCTTCCTTCCACCATACGACCGCACGCAGAACGCACAT
CAAAGGCCAGCCATCCATGCCTACGCACGTGGCGAGGCACTGGAGGCGCT
TTTCCCCTCGCGCACTCCGGCGTTGGCACAAGCTACGTAGTTGTCCGTAT
CTCTCTCAACACGGTTGTGTTCTCGCTCTCAGCATACGCCACTCCTGCTT
GACAACGAACAAAACCGTGAGAGCACCAGCTGTAACGCTTCCCATGCTTT
GTAGTTGCCTCCGCGCCAAAAACATGTATCAATTGTTCCCTCGAAACGTA
CACTTCTGTTGCCGTTGTGTATTCGTTGTTCGCGCTCGTCAGACGAAGGG
GAACTCGGTGCTCGGAACGGCACCCCCCCCCACAGCCCCCCCCAACCCTA
GCGTCACCTTTTTTCTTGTGGGCTACCCAAGTATTGCCAAGCCATACATG
AAAGATATACAACAAAAGTGTATATCGATCATTTTAACGCGAACAAGGGG
CGCTCCTTCGCAATTTCACAGGTGGTGGGTTTGCGTCTCCTTCTGCACGA
TTTTTTGTTTGTTTTTTTGGGCTTGTCATATCCGCCCGCGTTCACATTTA
GAAACAGAAAAAAAAAATTGCAACAGCTTGGTCGTCGCCCCCCCCCCTCC
CTCCACATTGGTGCCCTCCTCTTGTTAACGGGGTTCAGCGACCGGTTTAT
GGTTCAGCCCGTCGCGGGCGGTGTGGTCGATTCTCTCGCTTGGTTGTGAT
TTCTCCGAGCCATTAGCCTGTTCCATGGTCGGAAGCAGGCGTCCACCTGT
CCGATAATCTATGCATACACGGGCGCGAGAACTGCTTGCCTTTGCGTCGA
GACTGCAACGGTATCCTTAATCGCGATGTCCCCCCCCCCCGTTGCCTACA
ACGTGGTGTCTACGTTTCGTTTTTGCAGGCTTACCTTAACAAGCTGGCGG
GGCAAGCCGCGCAGCTCAAGTGGCGTAAGAACGACCAGGACACGGGCTCG
CCTCGCATCGTGGTGGCCATCCTGACGGAGAAGATTGTGTACCTCACCAA
GCACATGCAGCAGCACCCGCACGACTACCACTCCCGGCGCGGACTCATCA
CCATGGTCAACAAGAGGCGTAGGTGCGTATCTGTAGAGGGATCTTCTGGC
GTGGTTGTCGCCCATGGGTTGTGTCTCTTTTCCTCGTTTTTTTTTCCCGT
TAACGTGCGCTGCGCGCTGTGATGGTGCGGAAAGGAACCGATAGCGGTCC
AGATTTTTACCAGCCAGGGAAATGCCGCTACTGCTGTTCGGGGATAGGTT
TGCATTGCGAAGAAAAATAGCCCCCCCCCCGCCCGGGCGACATGAAGCAA
AGGCGACAGTTCGCGAGGAAGTGCCTTGTGTCGACACATGAAGTATTAAT
AGTTGGTGCTCACGCACACGACCACCGGAGTGCGGCTGGAGAATGAGAGT
AGTCCAGCAGCAGTGGGAGGCATCTTCCGTGACCTCGAGTTTCGAAGGTC
CCCCGCTGCAGATGTGATTTTTCTCTCTGTCGCAACTGAACCGGTTTGAA
CCAGCTATTTGCCGAACCGGAAGTTGCAACGCAACTTGGGAGAACGCCAG
GCTGTTATCTGCTGACCCACCCTCTCTCGCTGGCCGCATCATGTCTCCAC
GCTCCTCTCTCTGTCGACTGGCCGTGTGTGTCTGTCCGGTCTGCAGGCAG
CTGAACTACTACTTCAGGAAGGAGCCCAAGGAGTGCCTAGAGATGTGCGC
GACGCTGGGGATCCGATTCCGCCCCAAGACGAAAGTCAGGGGCCGAGAAC
AGGTGCGTTCGATTGTTCGGTTCGATCTGTCGGTCATCTTTAACGGGGCA
CTTTTGTTTTAGGAATATACATATAAATAGAGGAAGACTATCCGTTCGAG
ATATCATGACCGCAAAAGAAACAAAAGCAAAGGACGTTGCTGTCGTTTTC
TCGTTTGCAACTGACAATCCAAGCATCGTTTTTGTCATAGCGATAGTTGT
TTTCTTGTTGTGTGTTCGTGGGTCCTCCTACCGCTGGGTTTTCGATGTTT
TTTTTAAAGTTGGGCCGCACTGCTTCAAGAAGAAGATGTCACACTTGTAC
GGCCTAAGCGTTTCTCTTGTGTTATCTCGCGCATCGGTCGTCTTGATATG
TTTTTTATAGACGTTTTTCGGGTGCTCGCTGAACGACCATTTCCCCTCGT
CGTTTGGTGTGGTTGTGCGTTTTTGTGTGTCTACATACGTAGCACCGACG
GCACAACCGGGTGCCCAATGAAATACGTAAGAATTGGTGGGACGAAAAAG
CGACTCTTTCCTTCAGGTCCTCAGGGTCCCTAGGCTGAAAGGCCGCGGAG
AATTTGGAAGCGGGAAACCTTTGGCACGAACGAAAGTTTCTCAAAGCCGA
TCCCAACAATTTGTCTCGTCTGCTCTAACGCTCCCGCCGCTTGCGCCTCC
GTTTTGCAACCGGTTTGTTGTCTCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCTCTCTCTCAGCGTTACGCGGCGTACACCAACACCAAGTCCAAGATCGG
TAACGCCCGCCGCACGGCGATGCTCAACAAGGAGCGAGTGGACCACAAGC
AGGTCCTCAAGGAGCAGAAGCTGGCCGCCAGGCGGGCCAGGGGCTACGAG
AAATAAATTGTCGTATCCGTCTTTCGCCGCTCGAATGACGTGTTTGTTGT
CAGGGTTGTTGATGATCCGGTACTGCCGCGAGAGGGTGTTATGAATCTTA
TGAAACGATGTGCAGGTTTTTGCTGATTTCCATGCTGGTTTGTTTGTCTG
CAAGGTTGTTGGGAGTATTGAAGGCGACTCAGTGGGTTCAGTGGGCGGCG
GGAGGGTAGGAAACGGTGACGGCGTTTGTTTGGTTGTGTCGGCATCTTTC
TGACCACGCTGTTTCGCGACGGGGAAAACCTTTTGGTTGTCTGGGTCCGT
GAGGTTTTGGTCGCCGGTTTCGTGTATAAGGGTCTGGCCGTTGCTTGTGC
TGCTAGCCCCGTACAAGTAGTAGGTGAGTTTTTGATGATTCGTGATTCGC
GATGGCGCTTCAGTCTTATCTTCATGTCCCTACGGCTTGTCTTCCTCCCC
GCTGTTCTGTAAGTGACCGGACCTAAGGCTAGCGGTGCGTTTGTAGAGAA
CAGCAAGCTACGCGTCTGAGCGAACGTGCATCTCGAGATCTGCGAGACAC
GCTCTTCTTCGGCACGCCGAAGGCATGGCATAGCACCATTTTTCTTTCCG
GGAGGGGAAACGGAGAGGGAAAATTCGAGAAGCTGCGGCGCGGTAGGCTT
GTGGTGTGTTGCAGCTCTCGGAAGGGATATTGACCAGTGTGCGGTCTCCC
CTCTTGTGGTCCGCTTCCACGGCCGAGGGAGTATGGGGCCGACGGGTCAT
GGTGTGTCGTGTTAGAGTTTTAGAGGCGGGCTGACCGGCGACTTTCGAAT
CGACTTCCTTGACTAAATGATGCTTTCGGTGTCGTCGCGAAATTGGGAAG
AGGCTTGCACGCATGGTGTGTGGCAGTAAGAGTAGCTGCAGTGCGCGAGC
GGGCGTGTAGCTCTACGCTTTGAATTTTGCGGCTGACTGGTGATGAAAAA
ATCGCGAACCCGATCTTCTCGGCCGTGTGAGGATGCTATCCGTGGCTGGT
ATCTGCTACCAGTCTCAGGACGACGGAGTCGGAGCATGAGACATGGTCGA
GAGTGTTGAGAAAAGACTGATCTATCTGGATAGTAGATGTTTGTCTTGGA
GAAGGAGTTATGTTCCCTCCCACCCTTGGCGCATCTCCATGCCTGGGACG
CTGCTGTTGTCTCGCTACAGTAGTACAGGGTCTTCAATTCACACAAGTTT
CAGGCGGGCGAAGAGCGAAGAGGAATGAATGCACACACACACCCGCGCTT
GAGCGCGGTATGCCACC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1094:14803..20719-

>mRNA_E-siliculosus-1a_F_contig1094.649.1 ID=mRNA_E-siliculosus-1a_F_contig1094.649.1|Name=mRNA_E-siliculosus-1a_F_contig1094.649.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1440bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1094:14803..20719- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTACAACCTTCTCTGCGTCGCGGCTGCGGCTCTGGCGTGCTTGTCCAC
GGCAAACGCATTCGGGCTTGGGGGCGTAGCGGCGAGAGGAGCATGCAGAG
TCTCACGCGCATCAAAGATGTACAACCTTCTCTGCGTCGCGGCTGCGGCT
CTGGCGTGCTTGTCCACGGCAAACGCATTCGGGCTTGGGGGCGTAGCGGC
GAGAGGAGCATGCAGAGTCTCACGCGCATCAAAGGCTTCTTCCGTCACTA
GCGTGGCTCGCCGATCCCTCGTGCCGCCGTCGATGTCGACGATGGAGGCG
TCCGGGGCGGCGGATGTCTTGGCAGACCTTGACGAGTTGGACTCGGTCAT
GGGCGTGGAAACGCAGGACCAGCAGGACCTCAAGCCGAAGCAGGCTTCTT
CCGTCACTAGCGTGGCTCGCCGATCCCTCGTGCCGCCGTCGATGTCGACG
ATGGAGGCGTCCGGGGCGGCGGATGTCTTGGCAGACCTTGACGAGTTGGA
CTCGGTCATGGGCGTGGAAACGCAGGACCAGCAGGACCTCAAGCCGAAGC
AGGCTTACCTTAACAAGCTGGCGGGGCAAGCCGCGCAGCTCAAGTGGCGT
AAGAACGACCAGGACACGGGCTCGCCTCGCATCGTGGTGGCCATCCTGAC
GGAGAAGATTGTGTACCTCACCAAGCACATGCAGCAGCACCCGCACGACT
ACCACTCCCGGCGCGGACTCATCACCATGGTCAACAAGAGGCGTAGGCTT
ACCTTAACAAGCTGGCGGGGCAAGCCGCGCAGCTCAAGTGGCGTAAGAAC
GACCAGGACACGGGCTCGCCTCGCATCGTGGTGGCCATCCTGACGGAGAA
GATTGTGTACCTCACCAAGCACATGCAGCAGCACCCGCACGACTACCACT
CCCGGCGCGGACTCATCACCATGGTCAACAAGAGGCGTAGGCAGCTGAAC
TACTACTTCAGGAAGGAGCCCAAGGAGTGCCTAGAGATGTGCGCGACGCT
GGGGATCCGATTCCGCCCCAAGACGAAAGTCAGGGGCCGAGAACAGGCAG
CTGAACTACTACTTCAGGAAGGAGCCCAAGGAGTGCCTAGAGATGTGCGC
GACGCTGGGGATCCGATTCCGCCCCAAGACGAAAGTCAGGGGCCGAGAAC
AGCGTTACGCGGCGTACACCAACACCAAGTCCAAGATCGGTAACGCCCGC
CGCACGGCGATGCTCAACAAGGAGCGAGTGGACCACAAGCAGGTCCTCAA
GGAGCAGAAGCTGGCCGCCAGGCGGGCCAGGGGCTACGAGAAATAACGTT
ACGCGGCGTACACCAACACCAAGTCCAAGATCGGTAACGCCCGCCGCACG
GCGATGCTCAACAAGGAGCGAGTGGACCACAAGCAGGTCCTCAAGGAGCA
GAAGCTGGCCGCCAGGCGGGCCAGGGGCTACGAGAAATAA
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