prot_E-siliculosus-1a_F_contig1094.649.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1094.649.1
Unique Nameprot_E-siliculosus-1a_F_contig1094.649.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length240
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: D8LP06_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP06_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 1.070e-147
Identity = 226/240 (94.17%), Postives = 228/240 (95.00%), Query Frame = 0
Query:    1 MYNLLCVAAAALACLSTANAFGLGGVAARGACRVSXXXXXXXXXX-VARRSLVPPSMSTMEASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAMLNKERVDHKQVLKEQKLAARRARGYEK 239
            MYNLLCVAAAALACLSTANAFGLGG AARGACRVS           VARRSLVPPSMSTMEASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYF+KEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAMLNKERVDHKQVLKEQKLAARRARGY+K
Sbjct:    1 MYNLLCVAAAALACLSTANAFGLGGGAARGACRVSRASKAASSVTSVARRSLVPPSMSTMEASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFKKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAMLNKERVDHKQVLKEQKLAARRARGYDK 240          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A835ZJ48_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ48_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.790e-52
Identity = 88/164 (53.66%), Postives = 126/164 (76.83%), Query Frame = 0
Query:   49 RSLVPPSMSTMEASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAM 212
            RS   P ++ +  S A+DVLADL+ LD+ M  + +D  DL+P+Q YLN+LA QAA+ +W++++ D+GS  + VAI+TE+I+YLTKH+Q HP D+HSRRGLI +VN RR QLNY F  EP+ CL++CA+LGIRF+P++ V+ REQ+Y+++ NTKSKIG  R  A+
Sbjct:   63 RSCSQPLVAPLRMSDASDVLADLEALDNAMSDDKEDS-DLEPRQPYLNRLAMQAARREWQRSENDSGSAEVQVAIMTERIIYLTKHLQTHPKDFHSRRGLIALVNNRRSQLNYLFENEPQRCLDLCASLGIRFKPRSAVQSREQKYSSFKNTKSKIGMLRAAAL 225          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A835ZDP8_9STRA (Tetrapyrrole methylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP8_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.580e-47
Identity = 86/152 (56.58%), Postives = 121/152 (79.61%), Query Frame = 0
Query:   61 ASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAM 212
            +  A+DVLADL+ LDSV+  + +D  DL+P+Q YLN+LA QAA+ +W+++D D+GS  + VAI+TE+I+YLTKHMQ HP D+HSRRGLI +VNKRR QLN+ F  + + CLE+CA+LGIRF+P++ V+ REQ+Y+++ NTKSKIG  R  A+
Sbjct:   46 SDSASDVLADLEALDSVLSEDKEDA-DLEPRQPYLNRLAMQAARREWQRSDNDSGSAEVQVAIMTERIIYLTKHMQTHPKDFHSRRGLIALVNKRRSQLNFLFEHDAERCLELCASLGIRFKPRSAVQSREQKYSSFKNTKSKIGMLRAAAL 196          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7S2S8K6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8K6_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.240e-25
Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = 0
Query:   94 YLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAY 197
            +LN  A  AAQ KW+++D D+GSP   +A+  E+I YLT H+Q++P D+ SRRGL+ +VNKRRR LNY +RK P++ + M   LG+RF+P   V+ RE++YA Y
Sbjct:  112 FLNLQALLAAQQKWKRHDSDSGSPEYQIAVAHERIKYLTAHLQRNPKDFASRRGLVAIVNKRRRLLNYLYRKNPEKAMGMVTELGVRFKPPGTVQTREEKYAVY 215          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A482SQL1_9ARCH (30S ribosomal protein S15 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQL1_9ARCH)

HSP 1 Score: 105 bits (263), Expect = 3.330e-25
Identity = 58/135 (42.96%), Postives = 92/135 (68.15%), Query Frame = 0
Query:   96 NKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSKIGNARRTAMLNKERVDHKQVLKEQKLA 230
            N+ A  AA LKWR++++DTGSP + VA++TE+I YLT H+ +HP D  ++RGL  +VN RR  LN+    + ++  +MCA LGIR++P  +V  +E +Y+A+ NTK+K   A++   L K+R   KQ L ++++A
Sbjct:    4 NRAAIAAAILKWRRDERDTGSPEVQVAVMTERIRYLTSHLLKHPQDKSTKRGLTALVNDRRNNLNFLHSVDAEKARQMCAELGIRWKPPGQVWDKEAKYSAFKNTKNKKAEAKK---LVKKRA--KQALLDKQMA 133          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7S0CN17_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CN17_9STRA)

HSP 1 Score: 102 bits (253), Expect = 5.820e-23
Identity = 56/138 (40.58%), Postives = 86/138 (62.32%), Query Frame = 0
Query:   66 DVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSK 203
            D L ++ ELD    V T +  D     A+  +L   A + +WR +D D GSP + VA +TE+I YLT+H+++HP D+ ++RGL+ +VNKRR+ LNY + K P+   E+ A LG+R +P  +V+ R ++Y AY   K K
Sbjct:   70 DFLLNIGELDPADNVPTDEVPD---NYAHQQRLI--ATRKEWRTSDIDCGSPDVQVAGMTERITYLTRHLKEHPKDFSTKRGLLALVNKRRKLLNYLYSKNPERYAELVAALGVRHKPVGRVQSRSEKYGAYPQQKPK 202          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7S1C329_9STRA (30S ribosomal protein S15 n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C329_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.890e-22
Identity = 54/138 (39.13%), Postives = 86/138 (62.32%), Query Frame = 0
Query:   66 DVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSK 203
            D + + +ELD+    E++      P  +Y + ++    + KW + + D+GSP   +A +TE+I+YLTKHMQQ+P D+ +RRGL+ +VNKRRR LNY FR    + +E+ A+LGIR +   +V  RE+ Y  ++  K K
Sbjct:   19 DYILESNELDASEDTESE------PSSSYTHSVSLDEIRKKWARAENDSGSPEFQIAGMTERIMYLTKHMQQNPKDFSTRRGLLALVNKRRRLLNYLFRVNQDKYVEIIASLGIRHKAPGRVMTREEVYGRFSQRKKK 150          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7R9ZK55_9STRA (30S ribosomal protein S15 n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZK55_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 9.200e-22
Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = 0
Query:  107 WRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKS 202
            WR++++DTGSP   VA +TE+I YLTKH+QQ+P DY +RRGL+ +VNKRRR LNY  R++ ++  ++ ++LGIR +   +V  RE +Y  +   KS
Sbjct:   82 WRRSEKDTGSPEFQVAGMTERISYLTKHLQQNPKDYSTRRGLVALVNKRRRLLNYLIREDEQKYADIISSLGIRHKAPGRVESREDKYGRFNKQKS 177          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7S2IEZ5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IEZ5_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 5.720e-21
Identity = 55/144 (38.19%), Postives = 87/144 (60.42%), Query Frame = 0
Query:   60 EASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNTKSK 203
            EA  A D +    +LD     +  D   L   + Y ++L  Q  +L++R+++ DTGSP   VA +TE+I YLTKH+++HP D+ +RRGL+ +VNKRRR LNY FR++ +    +  ++GIR +   +V+ RE +Y  +   K K
Sbjct:   60 EAEEAEDFIVSAGDLDDEDAGDEDD--SLAVPEWYAHQLRVQELRLQYRRHENDTGSPEYQVAGMTERISYLTKHLKEHPKDFSTRRGLVALVNKRRRLLNYLFREDIERYRAIVTSMGIRHKAPGRVQSREDKYGRFPPQKEK 201          
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Match: A0A7S1XRX6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRX6_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.020e-21
Identity = 49/104 (47.12%), Postives = 73/104 (70.19%), Query Frame = 0
Query:   94 YLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAY 197
            + NK A  AA  K++K+++DTGS    +A L+ +I Y+T+H ++HP D+HSRRGLITMVNKRRR LNY  + +P+    + + LGIRF+   ++  R +RYAA+
Sbjct:  107 WSNKQAINAATEKFKKHEKDTGSAEFQIAKLSARITYMTEHAKRHPKDHHSRRGLITMVNKRRRLLNYLNKTDPEAVERITSELGIRFKAAGRIMTRAERYAAF 210          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1094.649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP06_ECTSI1.070e-14794.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZJ48_9STRA1.790e-5253.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDP8_9STRA1.580e-4756.58Tetrapyrrole methylase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2S8K6_9STRA1.240e-2550.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SQL1_9ARCH3.330e-2542.9630S ribosomal protein S15 n=1 Tax=archaeon TaxID=1... [more]
A0A7S0CN17_9STRA5.820e-2340.58Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1C329_9STRA1.890e-2239.1330S ribosomal protein S15 n=2 Tax=Corethron hystri... [more]
A0A7R9ZK55_9STRA9.200e-2247.9230S ribosomal protein S15 n=2 Tax=Craspedostauros ... [more]
A0A7S2IEZ5_9STRA5.720e-2138.19Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1XRX6_9STRA7.020e-2147.12Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 102..180
e-value: 4.9E-31
score: 119.1
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 106..180
e-value: 1.4E-25
score: 89.3
IPR005290Ribosomal protein S15, bacterial-typeTIGRFAMTIGR00952TIGR00952coord: 106..180
e-value: 3.4E-23
score: 79.7
IPR005290Ribosomal protein S15, bacterial-typePANTHERPTHR23321RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLARcoord: 92..182
IPR005290Ribosomal protein S15, bacterial-typeHAMAPMF_01343_BRibosomal_S15_Bcoord: 83..181
score: 16.059
NoneNo IPR availableGENE3D1.10.287.10coord: 95..180
e-value: 1.1E-23
score: 85.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..239
NoneNo IPR availablePRODOMPD157043coord: 106..180
e-value: 2.0E-15
score: 201.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.81
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 96..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1094contigE-siliculosus-1a_F_contig1094:16064..20607 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1094.649.1mRNA_E-siliculosus-1a_F_contig1094.649.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1094 14803..20719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1094.649.1 ID=prot_E-siliculosus-1a_F_contig1094.649.1|Name=mRNA_E-siliculosus-1a_F_contig1094.649.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=240bp
MYNLLCVAAAALACLSTANAFGLGGVAARGACRVSRASKASSVTSVARRS
LVPPSMSTMEASGAADVLADLDELDSVMGVETQDQQDLKPKQAYLNKLAG
QAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLIT
MVNKRRRQLNYYFRKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYTNT
KSKIGNARRTAMLNKERVDHKQVLKEQKLAARRARGYEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009068S15_NS1_RNA-bd
IPR005290Ribosomal_S15_bac-type
IPR000589Ribosomal_S15